Publications of the MPI

251.

Journal Article

Hammel, A.; Neupert, J.; Bock, R.: Optimized transgene expression in the red alga Porphyridium purpureum and efficient recombinant protein secretion into the culture medium. Plant Molecular Biology 114 (1), 18 (2024)

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252.

Journal Article

Hoffmann, G.; Incarbone, M.: A resilient bunch: stem cell antiviral immunity in plants. New Phytologist 241 (4), pp. 1415 - 1420 (2024)

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253.

Journal Article

Ogden, M.; Whitcomb, S. J.; Khan, G. A.; Roessner, U.; Hoefgen, R.; Persson, S.: Cellulose biosynthesis inhibitor isoxaben causes nutrient-dependent and tissue-specific Arabidopsis phenotypes. Plant Physiology 194 (2), pp. 612 - 617 (2024)

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254.

Journal Article

Pereira, A.M.; Martins, A.O.; Batista-Silva, W.; Condori-Apfata, J.A.; Silva, V.F.; Oliveira, L.A.; Andrade, E.S.; Martins, S.C.V.; Medeiros, D.B.; Nascimento, V.L. et al.; Fernie, A. R.; Nunes-Nesi, A.; Araújo, W.L.: Differential content of leaf and fruit pigment in tomatoes culminate in a complex metabolic reprogramming without growth impacts. Journal of Plant Physiology 293, 154170 (2024)

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255.

Journal Article

Rankenberg, T.; van Veen, H.; Sedaghatmehr, M.; Liao, C.-Y.; Devaiah, M. B.; Stouten, E. A.; Balazadeh, S.; Sasidharan, R.: Differential leaf flooding resilience in Arabidopsis thaliana is controlled by ethylene signaling-activated and age-dependent phosphorylation of ORESARA1 activity. Plant Communications 5 (6), 100848 (2024)

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256.

Journal Article

Rosa-Téllez, S.; Alcántara-Enguídanos, A.; Martinez-Seidel, F.; Casatejada-Anchel, R.; Saeheng, S.; Bailes, C. L.; Erban, A.; Medeiros, D.B.; Alepúz, P.; Matus, J. T. et al.; Kopka, J.; Muñoz-Bertomeu, J.; Krueger, S.; Roje, S.; Fernie, A. R.; Ros, R.: The serine-glycine-one carbon metabolic network orchestrates changes in nitrogen and sulfur metabolism and shapes plant development. The Plant Cell 36 (2), koad256, pp. 404 - 426 (2024)

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257.

Journal Article

Vicente, R.; Vergara-Díaz, O.; Uberegui, E.; Martínez-Peña, R.; Morcuende , R.; Kefauver, S. C.; López-Cristoffanini, C.; Aparicio, N.; Serret, M. D.; Araus, J. L.: Non-foliar photosynthesis and nitrogen assimilation influence grain yield in durum wheat regardless of water conditions. Journal of Experimental Botany 75 (11), pp. 3412 - 3430 (2024)

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258.

Journal Article

Yokoyama, R.: Sense or nonsense? The role of protein acetylation in cyanobacterial photosynthesis and growth. Plant Physiology 194 (2), pp. 595 - 597 (2024)

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259.

Journal Article

Sun, Y.; Zhou, Y.; Long, Q.; Xing, J.; Guo, P.; Liu, Y.; Zhang, C.; Zhang, Y.; Fernie, A. R.; Shi, Y. et al.; Luo, Y.; Luo, J.; Jin, C.: OsBCAT2, a gene responsible for the degradation of branched-chain amino acids, positively regulates salt tolerance by promoting the synthesis of vitamin B5. New Phytologist 241 (6), pp. 2558 - 2574 (2024)

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260.

Journal Article

Carreno-Quintero, N.; Tohge, T.; Van Acker, R.; McKee, L.S.; Zhou, Q.; Bolze, A.; Xing, X.; Özparpucu, M.; Rüggeberg, M.; Piofczyk, T. et al.; Koram, Y.; Bulone, V.; Boerjan, W.; Fernie, A. R.; Fraser, P.D.: Non-targeted discovery of high-value bio-products in Nicotiana glauca L: a potential renewable plant feedstock. Bioresources and Bioprocessing 11, 12 (2024)

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261.

Journal Article

Liu, N.; Du, Y.; Yan, S.; Chen, W.; Deng, M.; Xu, S.; Wang, H.; Zhan, W.; Huang, W.; Yin, Y. et al.; Yang, X.; Zhao, Q.; Fernie, A. R.; Yan, J.: The light and hypoxia induced gene ZmPORB1 determines tocopherol content in the maize kernel. Science China Life Sciences 67, pp. 435 - 448 (2024)

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262.

Journal Article

Xin, J.; Zhou, Y.; Qiu, Y.; Geng, H.; Wang, Y.; Song, Y.; Liang, J.; Yan, K.: Structural insights into AtABCG25, an angiosperm-specific abscisic acid exporter. Plant Communications 5 (1), 100776 (2024)

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263.

Journal Article

Barro-Trastoy, D.; Gomez, M.D.; Tornero, P.; Perez-Amador, M.A.: Hormonal Regulation of Ovule Initiation in Arabidopsis. Journal of Plant Growth Regulation 43, pp. 1725 - 1735 (2024)

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264.

Journal Article

Daubermann, A. G.; Lima, V. F.; Erban, A.; Kopka, J.; Fernie, A. R.; Schwarzländer, M.; dos Anjos, L.; Daloso, D. M.: Novel guard cell sink characteristics revealed by a multi-species/cell-types meta-analysis of 13C-labelling experiments. Theoretical and Experimental Plant Physiology (2024)

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265.

Journal Article

Hayashi, K.; Fernie, A. R.: Genomic evidence of a transposon-conferred adaptive response. Cell Reports 43 (12), 115009 (2024)

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266.

Journal Article

Hsieh, Y.; Lu, C.-Y.; Liu, P.-Y.; Kao, J.-M.; Yang, S.-Y.; Wu, C.-Y.; Wong, J.-W.M.; Shikina, S.; Fan, T.-Y.; Yang, S.-H.: Successive responses of three coral holobiont components (coral hosts, symbiotic algae, and bacteria) to daily temperature fluctuations. Ecological Indicators 158, 111515 (2024)

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267.

Journal Article

Li, J.; Martin, C.; Fernie, A. R.: Biofortification’s contribution to mitigating micronutrient deficiencies. Nature Food 5, pp. 19 - 27 (2024)

MPG.PuRe

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268.

Journal Article

Loiacono, F.V.; Bock, R.: An RNA polymerase that became a Swiss army knife. Cell 187 (5), pp. 1106 - 1108 (2024)

MPG.PuRe

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269.

Journal Article

Lv, Y.; Zhu, J.; Huang, S.; Xing, X.; Zhou, S.; Yao, H.; Yang, Z.; Liu, L.; Huang, S.; Miao, Y. et al.; Liu, X.; Fernie, A. R.; Ding, Y.; Luo, J.: Metabolome profiling and transcriptome analysis filling the early crucial missing steps of piperine biosynthesis in Piper nigrum L. The Plant Journal 117 (1), pp. 107 - 120 (2024)

MPG.PuRe

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270.

Journal Article

Pinsorn, P.; Hoefgen, R.; Sirikantaramas, S.: The novel durian (Durio zibethinus L.) homeodomain-leucine zipper (DzHD-ZIP) transcription factor 1.8 regulates the production of volatile sulfur compounds during fruit ripening. Postharvest Biology and Technology 210, 112776 (2024)

MPG.PuRe

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271.

Journal Article

Schilling, F.; Schumacher, C.; Koehl, K. I.; Sprenger, H.; Kopka, J.; Peters, R.; Haas, M.; Zuther, E.; Horn, R.: Whole-genome sequencing of tetraploid potato varieties reveals different strategies for drought tolerance. Scientific Reports 14 (1), 5476 (2024)

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272.

Journal Article

Zuther, E.; Erban, A.; Kopka, J.; Pagter, M.: Different metabolic adaptation strategies after overwintering in Eutrema sp. and Arabidopsis accessions under field conditions in Germany. Physiologia Plantarum 176 (1), e14201 (2024)

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273.

Journal Article

Karakas, E.; Ferrante, P.; Schafleitner, R.; Giuliano, G.; Fernie, A. R.; Alseekh, S.: Plant Sample Collection and Shipment for Multi-omic Analyses and Phytosanitary Evaluation. Current Protocols 3 (12), e952 (2023)

MPG.PuRe

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274.

Journal Article

Murik, O.; Geffen, O.; Shotland, Y.; Fernandez-Pozo, N.; Ullrich, K. K.; Walther, D.; Rensing, S. A.; Treves, H.: Genomic imprints of unparalleled growth. New Phytologist 241 (3), pp. 1144 - 1160 (2023)

MPG.PuRe

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275.

Journal Article

Zhang, Y.; Wiese, L.; Fang, H.; Alseekh, S.; de Souza, L. P.; Scossa, F.; Molloy, J.; Christmann, M.; Fernie, A. R.: Synthetic biology identifies the minimal gene set required for Paclitaxel biosynthesis in a plant chassis. Molecular Plant 16 (12), pp. 1951 - 1961 (2023)

MPG.PuRe

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276.

Journal Article

Arend, M.; Yuan, Y.; Ruiz-Sola, M.Á.; Omranian, N.; Nikoloski, Z.; Petroutsos, D.: Widening the landscape of transcriptional regulation of green algal photoprotection. Nature Communications 14 (1), 2687 (2023)

MPG.PuRe

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277.

Journal Article

Artins, A.; Fernie, A. R.: FCS-like zinc finger proteins maintain energy homeostasis during stresses. Trends in Plant Science 28 (12), pp. 1347 - 1349 (2023)

MPG.PuRe

DOI

278.

Journal Article

Back, G.; Walther, D.: Predictions of DNA mechanical properties at a genomic scale reveal potentially new functional roles of DNA flexibility. NAR: genomics and bioinformatics 5 (4), lqad097 (2023)

MPG.PuRe

DOI

279.

Journal Article

Barros, J.A.S.; Cavalcanti, J.H.F.; Pimentel, K.G.; Magen, S.; Soroka, Y.; Weiss, S.; Medeiros, D.B.; Nunes-Nesi, A.; Fernie, A. R.; Avin-Wittenberg, T. et al.; Araújo, W.L.: The interplay between autophagy and chloroplast vesiculation pathways under dark-induced senescence. Plant, Cell and Environment 46 (12), pp. 3721 - 3736 (2023)

MPG.PuRe

DOI

280.

Journal Article

Bulut, M.; Nunes-Nesi, A.; Fernie, A. R.; Alseekh, S.: Characterization of PetM cytochrome b6f subunit 7 domain-containing protein in tomato. Horticulture Research 10 (12), uhad224 (2023)

MPG.PuRe

DOI

281.

Journal Article

Duque-Jaramillo, A.; Ulmer, N.; Alseekh, S.; Bezrukov, I.; Fernie, A. R.; Skirycz, A.; Karasov, T.L.; Weigel, D.: The genetic and physiological basis of Arabidopsis thaliana tolerance to Pseudomonas viridiflava. New Phytologist 240 (5), pp. 1961 - 1975 (2023)

MPG.PuRe

DOI

282.

Journal Article

Fernie, A. R.: If you go down to the woods today you're in for a big surprise: mapping the diverse phenotypes of the European woodland strawberry. The Plant Journal 116 (5), pp. 1199 - 1200 (2023)

MPG.PuRe

DOI

283.

Journal Article

Giese, J.; Eirich, J.; Walther, D.; Zhang, Y.; Lassowskat, I.; Fernie, A. R.; Elsässer, M.; Maurino, V. G.; Schwarzländer, M.; Finkemeier, I.: The interplay of post-translational protein modifications in Arabidopsis leaves during photosynthesis induction. The Plant Journal 116 (4), pp. 1172 - 1193 (2023)

MPG.PuRe

DOI

284.

Journal Article

Gyuzeleva, D.; Benina, M.; Ivanova, V.; Vatov, E.; Alseekh, S.; Mladenova, T.; Mladenov, R.; Todorov, K.; Bivolarska, A.; Stoyanov, P.: Metabolome Profiling of Marrubium peregrinum L. and Marrubium friwaldskyanum Boiss Reveals Their Potential as Sources of Plant-Based Pharmaceuticals. International Journal of Molecular Sciences 24 (23), 17035 (2023)

MPG.PuRe

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285.

Journal Article

Langary, D.; Küken, A.; Nikoloski, Z.: The unraveling of balanced complexes in metabolic networks. Scientific Reports 13 (1), 5712 (2023)

MPG.PuRe

DOI

286.

Journal Article

Nattermann, M.; Wenk, S.; Pfister, P.; He, H.; Lee, S.H.; Szymanski, W.; Guntermann, N.; Zhu, F.; Nickel, L.; Wallner, C. et al.; Zarzycki, J.; Paczia, N.; Gaißert, N.; Franciò, G.; Leitner, W.; Gonzalez, R.; Erb, T.J.: Engineering a new-to-nature cascade for phosphate-dependent formate to formaldehyde conversion in vitro and in vivo. Nature Communications 14 (1), 2682 (2023)

MPG.PuRe

DOI

287.

Journal Article

Pinsorn, P.; Sanachai, K.; Rungrotmongkol, T.; Hoefgen, R.; Watanabe, M.; Brückner, F.; Nakabayashi, R.; Mori, T.; Oikawa, A.; Sasaki, R. et al.; Sucharitakul, J.; Saito, K.; Sirikantaramas, S.: Sulfur metabolism in durian pulps: Factors contributing to the production of volatile sulfur compounds during fruit ripening. Postharvest Biology and Technology 206, 112533 (2023)

MPG.PuRe

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288.

Journal Article

Qian, D.; Xi, J.; Nie, Y.; Zou, M.; Zhang, J.; Alseekh, S.; Fernie, A. R.; Chen, J.; Huang, L.: Chemical characterization of dicaffeoyl polyamine derivatives to understand specific secondary metabolites in goji berry. Journal of Food Composition and Analysis 122, 105434 (2023)

MPG.PuRe

DOI

289.

Journal Article

Tan, Q.W.; Lim, P.K.; Chen, Z.; Pasha, A.; Provart, N.; Arend, M.; Nikoloski, Z.; Mutwil, M.: Cross-stress gene expression atlas of Marchantia polymorpha reveals the hierarchy and regulatory principles of abiotic stress responses. Nature Communications 14 (1), 986 (2023)

MPG.PuRe

DOI

290.

Journal Article

Vicente, M. H.; MacLeod, K.; Zhu, F.; Rafael, D. D.; Figueira, A.; Fernie, A. R.; Mohareb, F.; Kevei, Z.; Thompson, A. J.; Zsögön, A. et al.; Peres, L. E. P.: The ORGAN SIZE (ORG) locus modulates both vegetative and reproductive gigantism in domesticated tomato. Annals of Botany 132 (7), pp. 1233 - 1248 (2023)

MPG.PuRe

DOI

291.

Journal Article

Youssef, W.A.; Feil, R.; Saint-Sorny, M.; Johnson, X.; Lunn, J. E.; Grimm, B.; Brzezowski, P.: Singlet oxygen-induced signalling depends on the metabolic status of the Chlamydomonas reinhardtii cell. Communications Biology 6, 529 (2023)

MPG.PuRe

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292.

Journal Article

Aarabi, F.; Ghigi, A.; Wijesingha Ahchige, M.; Bulut, M.; Geigenberger, P.; Neuhaus, H. E.; Sampathkumar, A.; Alseekh, S.; Fernie, A. R.: Genome-Wide Association Study unveils ascorbate regulation by PAS/LOV PROTEIN during high light acclimation. Plant Physiology 193 (3), pp. 2037 - 2054 (2023)

MPG.PuRe

DOI

293.

Journal Article

Bulut, M.; Wendenburg, R.; Bitocchi, E.; Bellucci, E.; Kroc, M.; Gioia, T.; Susek, K.; Papa, R.; Fernie, A. R.; Alseekh, S.: A Comprehensive Metabolomics and Lipidomics Atlas for the Legumes Common Bean, Chickpea, Lentil and Lupin. The Plant Journal 116 (4), pp. 1152 - 1171 (2023)

MPG.PuRe

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294.

Journal Article

Bysani, V. R.; Alam, A. S.M.; Bar-Even, A.; Machens, F.: Engineering and evolution of the complete Reductive Glycine Pathway in Saccharomyces cerevisiae for formate and CO2 assimilation. Metabolic Engineering 81, pp. 167 - 181 (2023)

MPG.PuRe

DOI

295.

Journal Article

El-Azaz, J.; Moore, B.; Takeda-Kimura, Y.; Yokoyama, R.; Wijesingha Ahchige, M.; Chen, X.; Schneider, M.; Maeda, H.A.: Coordinated regulation of the entry and exit steps of aromatic amino acid biosynthesis supports the dual lignin pathway in grasses. Nature Communications 14, 7242 (2023)

MPG.PuRe

DOI

296.

Journal Article

Fernie, A. R.; Yan, J.; Aharoni, A.; Ma, J.: Editorial: The past, present and future of The Plant Journal Resource Articles. The Plant Journal 116 (4), pp. 967 - 973 (2023)

MPG.PuRe

DOI

297.

Journal Article

Keller, J.-M.; Frieboes, M. J.; Jödecke, L.; Kappel, S.; Wulff, N.; Rindfleisch, T.; Sandoval-Ibanez, O.; Gerlach, I.; Thiele, W.; Bock, R. et al.; Eirich, J.; Finkemeier, I.; Schünemann, D.; Zoschke, R.; Schöttler, M. A.; Armbruster, U.: Eukaryote-specific assembly factor DEAP2 mediates an early step of photosystem II assembly in Arabidopsis. Plant Physiology 193 (3), pp. 1970 - 1986 (2023)

MPG.PuRe

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298.

Journal Article

Kudo, S. N.; Monte Bello, C.C.; Artins, A.; Caldana, C.; Satake, A.: Assessing the impacts of genetic defects on starch metabolism in Arabidopsis plants using the carbon homeostasis model. Journal of the Royal Society Interface 20 (208), 20230426 (2023)

MPG.PuRe

DOI

299.

Journal Article

Küken, A.; Treves, H.; Nikoloski, Z.: A simulation-free constrained regression approach for flux estimation in isotopically nonstationary metabolic flux analysis with applications in microalgae. Frontiers in Plant Science 14, 1140829 (2023)

MPG.PuRe

DOI

300.

Journal Article

Li, C.; Huang, W.; Han, X.; Zhao, G.; Zhang, W.; He, W.; Nie, B.; Chen, X.; Zhang, T.; Bai, W. et al.; Zhang, X.; He, J.; Zhao, C.; Fernie, A. R.; Tschaplinski, T.J.; Yang, X.; Yan, S.; Wang, L.: Diel dynamics of multi-omics in elkhorn fern provide new insights into weak CAM photosynthesis. Plant Communications 4 (5), 100594 (2023)

MPG.PuRe

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Journal Article (4279)