Max Planck Institute of Molecular Plant Physiology

Publications of the institute

Journal Article (241)

1.

Journal Article

Carbonnel, S.; Torabi, S.; Griesmann, M.; Bleek, E.; Tang, Y.; Buchka, S.; Basso, V.; Shindo, M.; Boyer, F.; Wang, T. et al.; Udvardi, M.; Waters, M.; Gutjahr, C.: Lotus japonicus karrikin receptors display divergent ligand-binding specificities and organ-dependent redundancy. PLoS Genetics 16 (12), e1009249 (2020)

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2.

Journal Article

Fu, H.-Y.; Ghandour, R.; Ruf, S.; Zoschke, R.; Bock, R.; Schöttler, M. A.: The availability of neither D2 nor CP43 limits the biogenesis of photosystem II in tobacco. Plant Physiology 185 (3), pp. 1111 - 1130 (2020)

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3.

Journal Article

Leskow, C. C.; Conte, M.; del Pozo, T.; Bermúdez, L.; Lira, B. S.; Gramegna, G.; Baroli, I.; Burgos, E.; Zavallo, D.; Kamenetzky, L. et al.; Asís, R.; Gonzalez, M.; Fernie, A. R.; Rossi, M.; Osorio, S.; Carrari, F.: The cytosolic invertase NI6 affects vegetative growth, flowering, fruit set and yield in tomato. Journal of Experimental Botany 72 (7), pp. 2525 - 2543 (2020)

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4.

Journal Article

Naake, T.; Maeda, H. A.; Proost, S.; Tohge, T.; Fernie, A. R.: Kingdom-wide analysis of the evolution of the plant type III polyketide synthase superfamily. Plant Physiology (2020)

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5.

Journal Article

Pignocchi, C.; Ivakov, A.; Feil, R.; Trick, M.; Pike, M.; Wang, T. L.; Lunn, J. E.; Smith, A. M.: Restriction of cytosolic sucrose hydrolysis profoundly alters development, metabolism and gene expression in Arabidopsis roots. Journal of Experimental Botany 72 (5), pp. 1850 - 1863 (2020)

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6.

Journal Article

Burgos, E.; Luca, D.; Belen, M.; Diouf, I.; de Haro; A., L.; Albert, E.; Sauvage, C.; Jian Tao, Z.; Bermudez, L. et al.; Asís, R.; Nunes Nesi, A.; Matringe, M.; Brehelin, C.; Guiraud, T.; Ferrand, C.; Atienza, I.; Jorly, J.; Mauxion, J. P.; Baldet, P.; Fernie, A. R.; Quadrana, L.; Rothan, C.; Causse, M.; Carrari, F.: Validated MAGIC and GWAS populations mapping reveal the link between vitamin E contents and natural variation in chorismate metabolism in tomato. The Plant Journal (2020)

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7.

Journal Article

Di Vittori, V.; Bitocchi, E.; Rodriguez, M.; Alseekh, S.; Bellucci, E.; Nanni, L.; Gioia, T.; Marzario, S.; Logozzo, G.; Rossato, M. et al.; De Quattro, C.; Murgia, M. L.; Ferreira, J. J.; Campa, A.; Xu, C.; Fiorani, F.; Sampathkumar, A.; Fröhlich, A.; Attene, G.; Delledonne, M.; Usadel, B.; Fernie, A. R.; Rau, D.; Papa, R.: Pod indehiscence in common bean is associated to the fine regulation of PvMYB26. Journal of Experimental Botany 72 (5), pp. 1617 - 1633 (2020)

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8.

Journal Article

Moreno, J.C.; Mi, J.; Alagoz, Y.; Al-Babili, S.: Plant Apocarotenoids: From Retrograde Signaling to Interspecific Communication. The Plant Journal (2020)

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9.

Journal Article

Popov, V. N.; Syromyatnikov, M. Y.; Fernie, A. R.; Chakraborty, S.; Gupta, K. J.; Igamberdiev, A. U.: The uncoupling of respiration in plant mitochondria: Keeping reactive oxygen and nitrogen species under control. Journal of Experimental Botany (2020)

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10.

Journal Article

Davies, B.; Roberts, J.; Raines, C.; Lunn, J. E.: Retirement of Mary Traynor, executive editor of JXB (1995–2020). Journal of Experimental Botany 71 (19), pp. 5719 - 5720 (2020)

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11.

Journal Article

Nakamura, M.; Batista, R. A.; Köhler, C.; Hennig, L.: Polycomb Repressive Complex 2-mediated histone modification H3K27me3 is associated with embryogenic potential in Norway spruce. Journal of Experimental Botany 71 (20), pp. 6366 - 6378 (2020)

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12.

Journal Article

Zaborowski, A. B.; Walther, D.: Determinants of correlated expression of transcription factors and their target genes. Nucleic Acids Research 48 (20), pp. 11347 - 11369 (2020)

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13.

Journal Article

Feitosa-Araujo, E.; da Fonseca Pereira, P.; Miranda Pena, M.; Medeiros, D.B.; de Souza, L. P.; Yoshida, T.; Weber, A. P.M.; Araújo, W. L.; Fernie, A. R.; Schwarzländer, M. et al.; Nunes-Nesi, A.: Changes in intracellular NAD status affect stomatal development in an abscisic acid-dependent manner. The Plant Journal (2020)

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14.

Journal Article

Carbonnel, S.; Das, D.; Varshney, K.; Kolodziej, M.; Villaecija-Aguilar, J.; Gutjahr, C.: The karrikin signaling regulator SMAX1 controls Lotus japonicus root and root hair development by suppressing ethylene biosynthesis. Proceedings of the National Academy of Sciences of the United States of America 117 (35), pp. 21757 - 21765 (2020)

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15.

Journal Article

Cotton, C. A. R.; Bernhardsgrütter, I.; He, H.; Burgener, S.; Schulz, L.; Paczia, N.; Dronsella, B.; Erban, A.; Toman, S.; Dempfle, M. et al.; de Maria, A.; Kopka, J.; Lindner, S. N.; Erb, T. J.; Bar-Even, A.: Underground isoleucine biosynthesis pathways in E. coli. eLife 9, e54207 (2020)

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16.

Journal Article

Altmann, M.; Altmann, S.; Rodriguez, P. A.; Weller, B.; Elorduy Vergara, L.; Palme, J.; Marín-de la Rosa, N.; Sauer, M.; Wenig, M.; Villaécija-Aguilar, J. A. et al.; Sales, J.; Lin, C.-W.; Pandiarajan, R.; Young, V.; Strobel, A.; Gross, L.; Carbonnel, S.; Kugler, K. G.; Garcia-Molina, A.; Bassel, G. W.; Falter, C.; Mayer, K. F. X.; Gutjahr, C.; Vlot, A. C.; Grill, E.; Falter-Braun, P.: Extensive signal integration by the phytohormone protein network. Nature 583 (7815), pp. 271 - 276 (2020)

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17.

Journal Article

Ramirez, L. C.; Calvo Tusell, C.; Stoffel, G. M. M.; Lindner, S. N.; Osuna, S.; Erb, T. J.; Garcia-Borràs, M.; Bar-Even, A.; Acevedo-Rocha, C. G.: In vivo selection for formate dehydrogenases with high efficiency and specificity towards NADP+. ACS Catalysis 10, pp. 7512 - 7525 (2020)

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18.

Journal Article

Sewelam, N.; Brilhaus, D.; Bräutigam, A.; Alseekh, S.; Fernie, A. R.; Maurino, V. G.: Molecular plant responses to combined abiotic stresses put a spotlight on unknown and abundant genes. Journal of Experimental Botany 71 (16), pp. 5098 - 5112 (2020)

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19.

Journal Article

Zhu, F.; Luo, T.; Liu, C.; Wang, Y.; Zheng, L.; Xiao, X.; Zhang, M.; Yang, H.; Yang, W.; Xu, R. et al.; Zeng, Y.; Ye, J.; Xu, J.; Xu, J.; Larkin, R. M.; Wang, P.; Wen, W.; Deng, X.; Fernie, A. R.; Cheng, Y.: A NAC transcription factor and its interaction protein hinder abscisic acid biosynthesis by synergistically repressing NCED5 in Citrus reticulata. Journal of Experimental Botany 71 (12), pp. 3613 - 3625 (2020)

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20.

Journal Article

Borghi, M.; Fernie, A. R.: Outstanding questions in flower metabolism. The Plant Journal 103 (4), pp. 1275 - 1288 (2020)

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21.

Journal Article

Cesarino, I.; Ioio, R. D.; Kirschner, G. K.; Ogden, M.; Picard, K. L.; Rast-Somssich, M. I.; Somssich, M.: Plant Science’s Next Top Models. Annals of Botany 126 (1), pp. 1 - 23 (2020)

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22.

Journal Article

Brito, D. S.; Agrimi, G.; Charton, L.; Brilhaus, D.; Bitetto, M. G.; Lana-Costa, J.; Messina, E.; Nascimento, C. P.; Araújo, E. F.; Viana Pires, M. et al.; Pérez-Díaz, J. L.; Obata, T.; Porcelli, V.; Palmieri, L.; Araújo, W. L.; Weber, A. P. M.; Linka, N.; Fernie, A. R.; Palmieri, F.; Nunes-Nesi, A.: Biochemical and Functional Characterization of a Mitochondrial Citrate Carrier in Arabidopsis thaliana. Biochemical Journal 477 (9), pp. 1759 - 1777 (2020)

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23.

Journal Article

Das, D.; Torabi, S.; Chapman, P.; Gutjahr, C.: A Flexible, Low-Cost Hydroponic Co-Cultivation System for Studying Arbuscular Mycorrhiza Symbiosis. Frontiers in Plant Science 11, 63 (2020)

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24.

Journal Article

Nowak, J.; Gennermann, K.; Persson, S.; Nikoloski, Z.: CytoSeg 2.0: automated extraction of actin filaments. Bioinformatics 36 (9), pp. 2950 - 2951 (2020)

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25.

Journal Article

Aarabi, F.; Naake, T.; Fernie, A. R.; Hoefgen, R.: Coordinating Sulfur Pools under Sulfate Deprivation. Trends in Plant Science 25 (12), pp. 1227 - 1239 (2020)

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26.

Journal Article

Agrawal, S.; Karcher, D.; Ruf, S.; Bock, R.: The Functions of Chloroplast Glutamyl-tRNA in Translation and Tetrapyrrole Biosynthesis. Plant Physiology 183 (1), pp. 263 - 276 (2020)

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27.

Journal Article

Aksenov, A.A.; Laponogov, I.; Zhang, Z.; Doran, S.L.F.; Belluomo, I.; Veselkov, D.; Bittremieux, W.; Nothias, L.F.; Nothias-Esposito, M.; Maloney, K.N. et al.; Misra, B.B.; Melnik, A.V.; Smirnov, A.; Du, X.; Jones, K.L.; Dorrestein, K.; Panitchpakdi, M.; Ernst, M.; van der Hooft, J.J.J.; Gonzalez, M.; Carazzone, C.; Amézquita, A.; Callewaert, C.; Morton, J.T.; Quinn, R.A.; Bouslimani, A.; Orio, A.A.; Petras, D.; Smania, A.M.; Couvillion, S.P.; Burnet, M.C.; Nicora, C.D.; Zink, E.; Metz, T.O.; Artaev, V.; Humston-Fulmer, E.; Gregor, R.; Meijler, M.M.; Mizrahi, I.; Eyal, S.; Anderson, B.; Dutton, R.; Lugan, R.; Boulch, P.L.; Guitton, Y.; Prevost, S.; Poirier, A.; Dervilly, G.; Le Bizec, B.; Fait, A.; Persi, N.S.; Song, C.; Gashu, K.; Coras, R.; Guma, M.; Manasson, J.; Scher, J.U.; Barupal, D.K.; Alseekh, S.; Fernie, A. R.; Mirnezami, R.; Vasiliou, V.; Schmid, R.; Borisov, R.S.; Kulikova, L.N.; Knight, R.; Wang, M.; Hanna, G.B.; Dorrestein, P.C.; Veselkov, K.: Auto-deconvolution and molecular networking of gas chromatography-mass spectrometry data. Nature Biotechnology 39, pp. 169 - 173 (2020)

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28.

Journal Article

Alseekh, S.; de Souza, L. P.; Benina, M.; Fernie, A. R.: The Style and Substance of Plant Flavonoid decoration; Towards Defining both Structure and Function. Phytochemistry 174, 112347 (2020)

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29.

Journal Article

Alseekh, S.; Ofner, I.; Liu, Z.; Osorio, S.; Vallarino, J. G.; Last, R. L.; Zamir, D.; Tohge, T.; Fernie, A. R.: Quantitative trait loci analysis (QTL) of seed specialized metabolites reveals seed-specific flavonols and differential regulation of glycoalkaloid content in tomato. The Plant Journal 103 (6), pp. 2007 - 2024 (2020)

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30.

Journal Article

Alseekh, S.; Scossa, F.; Fernie, A. R.: Mobile Transposable Elements Shape Plant Genome Diversity. Trends in Plant Science 25 (11), pp. 1062 - 1064 (2020)

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31.

Journal Article

Alves, R. D. F. B.; Menezes-Silva, P. E.; Sousa, L. F.; Loram-Lourenco, L.; Silva, M. L. F.; Almeida, S. E. S.; Silva, F. G.; de Souza, L. P.; Fernie, A. R.; Farnese, F. S.: Evidence of drought memory in Dipteryx alata indicates differential acclimation of plants to savanna conditions. Scientific Reports 10 (1), 16455 (2020)

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32.

Journal Article

Armbruster, U.; Strand, D.: Regulation of chloroplast primary metabolism. Photosynthesis Research 145 (1), pp. 1 - 3 (2020)

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33.

Journal Article

Artiukhov V, A.; Grabarska, A.; Gumbarewicz, E.; Aleshin, V. A.; Kaehne, T.; Obata, T.; Kazantsev V, A.; Lukashev V, N.; Stepulak, A.; Fernie, A. R. et al.; Bunik I, V.: Synthetic analogues of 2-oxo acids discriminate metabolic contribution of the 2-oxoglutarate and 2-oxoadipate dehydrogenases in mammalian cells and tissues. Scientific Reports 10 (1), 1886 (2020)

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34.

Journal Article

Aslan, S.; Noor, E.; Benito-Vaquerizo, S.; Lindner, S. N.; Bar-Even, A.: Design and engineering of E. coli metabolic sensor strains with a wide sensitivity range for glycerate. Metabolic Engineering 57, pp. 96 - 109 (2020)

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35.

Journal Article

Aucique-Pérez, C.E.; Resende, R.S.; Martins, A.O.; Silveira, P.R.; Cavalcanti, J.H.F.; Vieira, N.M.; Fernie, A. R.; Araújo, W.L.; DaMatta, F.M.; Rodrigues, F.Á.: How do wheat plants cope with Pyricularia oryzae infection? A physiological and metabolic approach. Planta 252 (2), 24 (2020)

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36.

Journal Article

Baena-González, E.; Lunn, J. E.: SnRK1 and trehalose 6-phosphate – two ancient pathways converge to regulate plant metabolism and growth. Current Opinion in Plant Biology 55, pp. 52 - 59 (2020)

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37.

Journal Article

Barsh, G. S.; Copenhaver, G. P.; Köhler, C.; Qu, L.-J.: Kingdom Come. PLoS Genetics 16 (11), e1009178 (2020)

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38.

Journal Article

Batista, R. A.; Köhler, C.: Genomic imprinting in plants-revisiting existing models. Genes and Development 34 (1-2), pp. 24 - 36 (2020)

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39.

Journal Article

Bianchetti, R.; De Luca, B.; de Haro, L.A.; Rosado, D.; Demarco, D.; Conte, M.; Bermudez, L.; Freschi, L.; Fernie, A. R.; Michaelson, L.V. et al.; Haslam, R.P.; Rossi, M.; Carrari, F.: Phytochrome-Dependent Temperature Perception Modulates Isoprenoid Metabolism. Plant Physiology 183 (3), pp. 869 - 882 (2020)

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40.

Journal Article

Breitel, D.; Brett, P.; Alseekh, S.; Fernie, A. R.; Butelli, E.; Martin, C.: Metabolic engineering of tomato fruit enriched in L-DOPA. Metabolic Engineering 65, pp. 185 - 196 (2020)

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41.

Journal Article

Cerda, A.; Moreno, J.C.; Acosta, D.; Godoy, F.; Cáceres, J. C.; Cabrera, R.; Stange, C.: Functional characterization and in silico modelling of MdPSY2 variants and MdPSY5 phytoene synthases from Malus domestica. Journal of Plant Physiology 249, 153166 (2020)

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42.

Journal Article

Chen, J.; Hu, X.; Shi, T.; Yin, H.; Sun, D.; Hao, Y.; Xia, X.; Luo, J.; Fernie, A. R.; He, Z. et al.; Chen, W.: Metabolite-based genome-wide association study enables dissection of the flavonoid decoration pathway of wheat kernels. Plant Biotechnology Journal 18 (8), pp. 1722 - 1735 (2020)

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43.

Journal Article

Chen, M.-X.; Zhang, Y.; Fernie, A. R.; Liu, Y.-G.; Zhu, F.-Y.: SWATH-MS-Based Proteomics: Strategies and Applications in Plants. Trends in Biotechnology 39 (5), pp. 433 - 437 (2020)

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44.

Journal Article

Chen, M.-X.; Zhu, F.-Y.; Gao, B.; Ma, K.-L.; Zhang, Y.; Fernie, A. R.; Chen, X.; Dai, L.; Ye, N.-H.; Zhang, X. et al.; Tian, Y.; Zhang, D.; Xiao, S.; Zhang, J.; Liu, Y.-G.: Full-length transcript-based proteogenomics of rice improves its genome and proteome annotation. Plant Physiology 182 (3), pp. 1510 - 1526 (2020)

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45.

Journal Article

Chodasiewicz, M.; Sokolowska, E.; Nelson-Dittrich, A. C.; Masiuk, A.; Moreno, J.C.; Nelson, A. D. L.; Skirycz, A.: Identification and Characterization of the Heat-Induced Plastidial Stress Granules Reveal New Insight Into Arabidopsis Stress Response. Frontiers in Plant Science 11, 597592 (2020)

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46.

Journal Article

Chorianopoulou, S. N.; Sigalas, P. P.; Tsoutsoura, N.; Apodiakou, A.; Saridis, G.; Ventouris, Y. E.; Bouranis, D. L.: Regulation of Sulfur Homeostasis in Mycorrhizal Maize Plants Grown in a Fe-Limited Environment. International Journal of Molecular Sciences 21 (9), 3249 (2020)

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47.

Journal Article

Claassens, N. J.; Bordanaba-Florit, G.; Cotton, C. A. R.; de Maria, A.; Finger-Bou, M.; Friedeheim, L.; Giner-Laguarda, N.; Munar-Palmer, M.; Newell, W.; Scarinci, G. et al.; Verbunt, J.; de Vries, S.T.; Yilmaz, S.; Bar-Even, A.: Replacing the Calvin cycle with the reductive glycine pathway in Cupriavidus necator. Metabolic Engineering 62, pp. 30 - 41 (2020)

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48.

Journal Article

Claassens, N. J.; Scarinci, G.; Fischer, A.; Flamholz, A.I.; Newell, W.; Frielingsdorf, S.; Lenz, O.; Bar-Even, A.: Phosphoglycolate salvage in a chemolithoautotroph using the Calvin cycle. Proceedings of the National Academy of Sciences of the United States of America 117 (36), pp. 22452 - 22461 (2020)

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49.

Journal Article

Clemente-Moreno, M.; Omranian, N.; Sáez, P.; Figueroa, C.; Del-Saz, N.; Elso, M.; Poblete, L.; Orf, I.; Cuadros-Inostroza, A.; Cavieres, L.A. et al.; Bravo, L.; Fernie, A. R.; Ribas-Carbó, M.; Flexas, J.; Nikoloski, Z.; Brotman, Y.; Gago, J.: Low temperature tolerance of the Antarctic species Deschampsia antarctica: a complex metabolic response associated with nutrient remobilization. Plant, Cell and Environment 43 (6), pp. 1376 - 1393 (2020)

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50.

Journal Article

Correa Galvis, V.; Strand, D.; Messer, M.; Thiele, W.; Bethmann, S.; Hübner, D.; Uflewski, M.; Kaiser, E.; Siemiatkowska, B.; Morris, B. A. et al.; Toth, S. Z.; Watanabe, M.; Brückner, F.; Hoefgen, R.; Jahns, P.; Schöttler, M. A.; Armbruster, U.: H+ transport by K+ EXCHANGE ANTIPORTER3 promotes photosynthesis and growth in chloroplast ATP synthase mutants. Plant Physiology 182, pp. 2126 - 2142 (2020)

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