Publications of the MPI

Max Planck Institute of Molecular Plant Physiology

Journal Article (4279)

201.

Journal Article

Hernández-Sánchez, I.E.; Rindfleisch, T.; Alpers, J.; Dulle, M.; Garvey, C. J.; Knox-Brown, P.; Miettinen, M. S.; Nagy, G.; Pusterla, J. M.; Rekas, A. et al.; Shou, K.; Stadler, A. M.; Walther, D.; Wolff, M.; Zuther, E.; Thalhammer, A.: Functional in vitro diversity of an intrinsically disordered plant protein during freeze–thawing is encoded by its structural plasticity. Protein Science 33 (5), e4989 (2024)

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202.

Journal Article

Hsieh, Y. E.; Tandon, K.; Verbruggen, H.; Nikoloski, Z.: Comparative analysis of metabolic models of microbial communities reconstructed from automated tools and consensus approaches. npj Systems biology and applications 10 (1), 54 (2024)

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203.

Journal Article

John, A.; Krämer, M.; Lehmann, M.; Kunz, H.-H.; Aarabi, F.; Alseekh, S.; Fernie, A. R.; Sommer, F.; Schroda, M.; Zimmer, D. et al.; Mühlhaus, T.; Peisker, H.; Gutbrod, K.; Dörmann, P.; Neunzig, J.; Philippar, K.; Neuhaus, H. E.: Degradation of FATTY ACID EXPORT PROTEIN1 by RHOMBOID-LIKE PROTEASE11 contributes to cold tolerance in Arabidopsis. The Plant Cell 36 (5), pp. 1937 - 1962 (2024)

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204.

Journal Article

Krämer, C.; Boehm, C.R.; Liu, J.; Ting, M. K. Y.; Hertle, A. P.; Forner, J.; Ruf, S.; Schöttler, M. A.; Zoschke, R.; Bock, R.: Removal of the large inverted repeat from the plastid genome reveals gene dosage effects and leads to increased genome copy number. Nature Plants 10, pp. 923 - 935 (2024)

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205.

Journal Article

Kruesemann, J. L.; Lindner, S. N.: Bioproduction from methanol. Nature Catalysis 7 (5), pp. 472 - 474 (2024)

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206.

Journal Article

Lai, D.; Zhang, K.; He, Y.; Fan, Y.; Li, W.; Shi, Y.; Gao, Y.; Huang, X.; He, J.; Zhao, H. et al.; Lu, X.; Xiao, Y.; Cheng, J.; Ruan, J.; Georgiev, M. I.; Fernie, A. R.; Zhou, M.: Multi-omics identification of a key glycosyl hydrolase gene FtGH1 involved in rutin hydrolysis in Tartary buckwheat (Fagopyrum tataricum). Plant Biotechnology Journal 22 (5), pp. 1206 - 1223 (2024)

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207.

Journal Article

Laitinen, R. A. E.; Nikoloski, Z.: Strategies to identify and dissect trade-offs in plants. Molecular Ecology 33 (10), e16780 (2024)

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208.

Journal Article

Li, R.; Rosado-Souza, L.; Sampathkumar, A.; Fernie, A. R.: The relationship between cell wall and postharvest physiological deterioration of fresh produce. Plant Physiology and Biochemistry 210, 108568 (2024)

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209.

Journal Article

Stavrakeva, K.; Metodieva, K.; Benina, M.; Bivolarska, A.; Dimov, I.; Choneva, M.; Kokova, V.; Alseekh, S.; Ivanova, V.; Vatov, E. et al.; Gechev, T.; Mladenova, T.; Mladenov, R.; Todorov, K.; Stoyanov, P.; Gyuzeleva, D.; Popova, M.; Apostolova, E.: Metabolic Composition of Methanolic Extract of the Balkan Endemic Species Micromeria frivaldszkyana (Degen) Velen and Its Anti-Inflammatory Effect on Male Wistar Rats. International Journal of Molecular Sciences 25 (10), 5396 (2024)

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210.

Journal Article

Yu, S.; Zhu, M.; Li, P.; Zuo, H.; Li, J.; Li, Y.; Peng, A.; Huang, J.; Fernie, A. R.; Liu, Z. et al.; Zhao, J.: Dissection of the spatial dynamics of biosynthesis, transport, and turnover of major amino acids in tea plants (Camellia sinensis). Horticulture Research 11 (5), uhae060 (2024)

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211.

Journal Article

Bradamante, G.; Nguyen, V. H.; Incarbone, M.; Meir, Z.; Bente, H.; Donà, M.; Lettner, N.; Mittelsten Scheid, O.; Gutzat, R.: Two ARG ONAUTE proteins loaded with transposon-derived small RNAs are associated with the reproductive cell lineage in Arabidopsis. The Plant Cell 36 (4), pp. 863 - 880 (2024)

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212.

Journal Article

Butel, N.; Köhler, C.: Flowering plant reproduction. Current Biology 34 (8), pp. R308 - R312 (2024)

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213.

Journal Article

Fernie, A. R.; Sonnewald, U.; Sampathkumar, A.: Metabolism and development. Russian Journal of Plant Physiology 295, 154208 (2024)

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214.

Journal Article

Kakoulidou, I.; Piecyk, R. S.; Meyer, R. C.; Kuhlmann, M.; Gutjahr, C.; Altmann, T.; Johannes, F.: Mapping parental DMRs predictive of local and distal methylome remodeling in epigenetic F1 hybrids. Life science alliance 7 (4), e202402599 (2024)

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215.

Journal Article

Lathe, R.; McFarlane, H. E.; Kesten, C.; Wang, L.; Khan, G. A.; Ebert, B.; Ramírez-Rodríguez, E. A.; Zheng, S.; Noord, N.; Frandsen, K. et al.; Bhalerao, R. P.; Persson, S.: NKS1/ELMO4 is an integral protein of a pectin synthesis protein complex and maintains Golgi morphology and cell adhesion in Arabidopsis. PNAS 121 (15), e2321759121 (2024)

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216.

Journal Article

Qiu, H.; Zhang, X.; Zhang, Y.; Jiang, X.; Ren, Y.; Gao, D.; Zhu, X.; Usadel, B.; Fernie, A. R.; Wen, W.: Depicting the genetic and metabolic panorama of chemical diversity in the tea plant. Plant Biotechnology Journal 22, pp. 1001 - 1016 (2024)

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217.

Journal Article

Xu, W.; Li, S.; Bock, R.; Zhang, J.: A heat-inducible expression system for external control of gene expression in plastids. Plant Biotechnology Journal 22 (4), pp. 960 - 969 (2024)

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218.

Journal Article

Yuen, E. L. H.; Leary, A. Y.; Clavel, M.; Tumtas, Y.; Mohseni, A.; Zhao, J.; Picchianti, L.; Jamshidiha, M.; Pandey, P.; Duggan, C. et al.; Cota, E.; Dagdas, Y.; Bozkurt, T. O.: A RabGAP negatively regulates plant autophagy and immune trafficking. Current Biology 34 (10), pp. 2049 - 2065.e6 (2024)

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219.

Journal Article

Liu, F.; Fernie, A. R.; Zhang, Y.: Plant gene co-expression defines the biosynthetic pathway of neuroactive alkaloids. Molecular Plant 17 (3), pp. 372 - 374 (2024)

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220.

Journal Article

Apodiakou, A.; Alseekh, S.; Hoefgen, R.; Whitcomb, S. J.: Overexpression of SLIM1 transcription factor accelerates vegetative development in Arabidopsis thaliana. Frontiers in Plant Science 15, 1327152 (2024)

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221.

Journal Article

Bao, Y.-J.; Chen, J.-X.; Zhang, Y.; Fernie, A. R.; Zhang, J.; Huang, B.-X.; Zhu, F.-Y.; Cao, F.-L.: Emerging role of jasmonic acid in woody plant development. Advanced Agrochem 3 (1), pp. 26 - 38 (2024)

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222.

Journal Article

Bortlik, J.; Lühle, J.; Alseekh, S.; Weiste, C.; Fernie, A. R.; Dröge-Laser, W.; Börnke, F.: DOMAIN OF UNKNOWN FUNCTION581-9 negatively regulates SnRK1 kinase activity. Plant Physiology 194 (3), pp. 1853 - 1869 (2024)

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223.

Journal Article

El-Shiekh, R.A.; Elshimy, R.; Mandour, A.A.; Kassem, H.A.H.; Khaleel, A.E.; Alseekh, S.; Fernie, A. R.; Salem, M.A.: Murraya koenigii (L.) Sprengel seeds and pericarps in relation to their chemical profiles: new approach for multidrug resistant Acinetobacterbaumannii ventilator-associated pneumonia. Applied Biological Chemistry 67 (1), 35 (2024)

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224.

Journal Article

Fernie, A. R.; Bulut, M.: A delicate balance: transcriptional control of awn development and yield in barley. Trends in Plant Science 29 (9), pp. 946 - 947 (2024)

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225.

Journal Article

Gotsmann, V.L.; Ting, M. K. Y.; Haase, N.; Rudorf, S.; Zoschke, R.; Willmund, F.: Utilizing high-resolution ribosome profiling for the global investigation of gene expression in Chlamydomonas. The Plant Journal 117 (5), pp. 1614 - 1634 (2024)

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226.

Journal Article

Gupta, S.; Petrov, V.; Garg, V.; Mueller-Roeber, B.; Fernie, A. R.; Nikoloski, Z.; Gechev, T.: The genome of Haberlea rhodopensis provides insights into the mechanisms for tolerance to multiple extreme environments. Cellular and Molecular Life Sciences 81 (1), 117 (2024)

MPG.PuRe

227.

Journal Article

Habibpour, M.; Razaghi-Moghadam, Z.; Nikoloski, Z.: Prediction and integration of metabolite-protein interactions with genome-scale metabolic models. Metabolic Engineering 82, pp. 216 - 224 (2024)

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228.

Journal Article

John, S.; Apelt, F.; Kumar, A.; Acosta, I.; Bents, D.; Annunziata, M. G.; Fichtner, F.; Gutjahr, C.; Mueller-Roeber, B.; Olas, J. J.: The Transcription factor HSFA7b controls thermomemory at the shoot apical meristem by regulating ethylene biosynthesis and signaling in Arabidopsis. Plant Communications 5 (3), 100743 (2024)

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229.

Journal Article

Martinez Rivas, F.J.; Fernie, A. R.; Aarabi, F.: Roles and Regulation of the RBOHD Enzyme in Initiating ROS-Mediated Systemic Signaling During Biotic and Abiotic Stress. Plant Stress 11, 100327 (2024)

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230.

Journal Article

Naake, T.; Zhu, F.; Alseekh, S.; Scossa, F.; de Souza, L. P.; Borghi, M.; Brotman, Y.; Mori, T.; Nakabayashi, R.; Tohge, T. et al.; Fernie, A. R.: Genome-wide association studies identify loci controlling specialized seed metabolites in Arabidopsis. Plant Physiology 194 (3), pp. 1705 - 1721 (2024)

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231.

Journal Article

Sageman-Furnas, K.; Duarte, G. T.; Laitinen, R. A.E.: Detailing early shoot growth arrest in Kro-0 x BG-5 hybrids of Arabidopsis thaliana. Plant and Cell Physiology 65 (3), pp. 420 - 427 (2024)

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232.

Journal Article

Schulz-Mirbach, H.; Dronsella, B.; He, H.; Erb, T.J.: Creating new-to-nature carbon fixation: A guide. Metabolic Engineering 82, pp. 12 - 28 (2024)

MPG.PuRe

233.

Journal Article

Takahashi, D.; Soga, K.; Kikuchi, T.; Kutsuno, T.; Hao, P.; Sasaki, K.; Nishiyama, Y.; Kidokoro, S.; Sampathkumar, A.; Bacic, A. et al.; Johnson, K. L.; Kotake, T.: Structural changes in cell wall pectic polymers contribute to freezing tolerance induced by cold acclimation in plants. Current Biology 34 (5), pp. 958 - 968 (2024)

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234.

Journal Article

Timm, S.; Klaas, N.; Niemann, J.; Jahnke, K.; Alseekh, S.; Zhang, Y.; Souza, P.V.L.; Hou, L.-Y.; Cosse, M.; Selinski, J. et al.; Geigenberger, P.; Daloso, D.M.; Fernie, A. R.; Hagemann, M.: Thioredoxins o1 and h2 jointly adjust mitochondrial dihydrolipoamide dehydrogenase-dependent pathways towards changing environments. Plant, Cell and Environment 47 (7), pp. 2542 - 2560 (2024)

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235.

Journal Article

Tiozon, R. J. N.; Buenafe, R.J.Q.; Jain, V.; Sen, P.; Molina, L.R.; Anacleto, R.; Sreenivasulu, N.: Machine learning technique unraveled subspecies-specific ionomic variation with the preferential mineral enrichment in rice. Cereal Chemistry 101 (2), pp. 367 - 381 (2024)

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236.

Journal Article

Tóth, D.; Kuntam, S.; Ferenczi, Á.; Vidal-Meireles, A.; Kovács, L.; Wang, L.; Sarkadi, Z.; Migh, E.; Szentmihályi, K.; Tengölics, R. et al.; Neupert, J.; Bock, R.; Jonikas, M. C.; Molnar, A.; Tóth, S. Z.: Chloroplast phosphate transporter CrPHT4-7 regulates phosphate homeostasis and photosynthesis in Chlamydomonas. Plant Physiology 194 (3), pp. 1646 - 1661 (2024)

MPG.PuRe

237.

Journal Article

Uflewski, M.; Rindfleisch, T.; Korkmaz, K.; Tietz, E.; Mielke, S.; Correa Galvis, V.; Dünschede, B.; Luzarowski, M.; Skirycz, A.; Schwarzländer, M. et al.; Strand, D.; Hertle, A. P.; Schünemann, D.; Walther, D.; Thalhammer, A.; Wolff, M.; Armbruster, U.: The thylakoid proton antiporter KEA3 regulates photosynthesis in response to the chloroplast energy status. Nature Communications 15, 2792 (2024)

MPG.PuRe

238.

Journal Article

Wang, H.; Li, L.; Ma, L.; Fernie, A. R.; Fu, A.; Bai, C.; Sang, Z.; Guo, S.; Zhang, F.; Wang, Q. et al.; Zheng, Y.; Zuo, J.: Revealing the specific regulations of nitric oxide on the postharvest ripening and senescence of bitter melon fruit. aBIOTECH 5, pp. 29 - 45 (2024)

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239.

Journal Article

Yokoyama, R.: How to make green and purple from gold. Plant Physiology 194 (3), pp. 1268 - 1270 (2024)

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240.

Journal Article

Zhu, A.; Liu, M.; Tian, Z.; Liu, W.; Hu, X.; Ao, M.; Jia, J.; Shi, T.; Liu, H.; Li, D. et al.; Mao, H.; Su, H.; Yan, W.; Li, Q.; Lan, C.; Fernie, A. R.; Chen, W.: Chemical-tag-based semi-annotated metabolomics facilitates gene identification and specialized metabolic pathway elucidation in wheat. The Plant Cell 36 (3), pp. 540 - 558 (2024)

MPG.PuRe

241.

Journal Article

He, Y.; Zhang, K.; Shi, Y.; Lin, H.; Huang, X.; Lu, X.; Wang, Z.; Li, W.; Feng, X.; Shi, T. et al.; Chen, Q.; Wang, J.; Tang, Y.; Chapman, M. A.; Germ, M.; Luthar, Z.; Kreft, I.; Janovská, D.; Meglič, V.; Woo, S.-H.; Quinet, M.; Fernie, A. R.; Liu, X.; Zhou, M.: Genomic insight into the origin, domestication, dispersal, diversification and human selection of Tartary buckwheat. Genome Biology: Biology for the Post-Genomic Era 25 (1), 61 (2024)

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242.

Journal Article

Borghi, M.; Pacifico, D.; Crucitti, D.; Squartini, A.; Berger, M.M.J.; Gamboni, M.; Carimi, F.; Lehad, A.; Costa, A.; Gallusci, P. et al.; Fernie, A. R.; Zottini, M.: Smart selection of soil microbes for resilient and sustainable viticulture. The Plant Journal 118 (5), pp. 1258 - 1267 (2024)

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243.

Journal Article

Kreisz, P.; Hellens, A. M.; Fröschel, C.; Krischke, M.; Maag, D.; Feil, R.; Wildenhain, T.; Draken, J.; Braune, G.; Erdelitsch, L. et al.; Cecchino, L.; Wagner, T. C.; Ache, P.; Mueller, M. J.; Becker, D.; Lunn, J. E.; Hanson, J.; Beveridge, C. A.; Fichtner, F.; Barbier, F. F.; Weiste, C.: S1 basic leucine zipper transcription factors shape plant architecture by controlling C/N partitioning to apical and lateral organs. Proceedings of the National Academy of Sciences of the United States of America 121 (7), e2313343121 (2024)

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244.

Journal Article

Yan, M.; Li, M.; Wang, Y.; Wang, X.; Moeinzadeh, M.-H.; Quispe-Huamanquispe, D. G.; Fan, W.; Fang, Y.; Wang, Y.; Nie, H. et al.; Wang, Z.; Tanaka, A.; Heider, B.; Kreuze, J. F.; Gheysen, G.; Wang, H.; Vingron, M.; Bock, R.; Yang, J.: Haplotype-based phylogenetic analysis and population genomics uncover the origin and domestication of sweetpotato. Molecular Plant 17 (2), pp. 277 - 296 (2024)

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245.

Journal Article

Abrar Hasnat, M.; Zupok, A.; Gorka, M.; Iobbi-Nivol, C.; Skirycz, A.; Jourlin-Castelli, C.; Bier, F.; Agarwal, S.; Irefo, E.; Leimkühler, S.: Iron limitation indirectly reduces the Escherichia coli torCAD operon expression by a reduction of molybdenum cofactor availability. Microbiology Spectrum 12 (2), e03480-23 (2024)

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246.

Journal Article

Baldet, P.; Mori, K.; Decros, G.; Beauvoit, B.; Colombie, S.; Prigent, S.; Petriacq, P.; Gibon, Y.: Multi-regulated GDP-L-galactose phosphorylase calls the tune in ascorbate biosynthesis. Journal of Experimental Botany 75 (9), pp. 2631 - 2643 (2024)

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247.

Journal Article

Boutoub, O.; Jadhav, S.; Zheng, X.; El Ghadraoui, L.; Al Babili, S.; Fernie, A. R.; Figueiredo, A.C.; Miguel, M.G.; Borghi, M.: Biochemical characterization of Euphorbia resinifera floral cyathia. Journal of Plant Physiology 293, 154184 (2024)

MPG.PuRe

248.

Journal Article

Dziubek, D.; Poeker, L.; Siemiatkowska, B.; Graf, A.; Marino, G.; Alseekh, S.; Arrivault, S.; Fernie, A. R.; Armbruster, U.; Geigenberger, P.: NTRC and thioredoxins m1/m2 underpin the light acclimation of plants on proteome and metabolome levels. Plant Physiology 194, pp. 982 - 1005 (2024)

MPG.PuRe

249.

Journal Article

Elbanna, A. H.; Abdelghany, S.; Alseekh, S.; Fernie, A. R.; Farag, M. A.: Seasonal and taxa impact on edible sea cucumber metabolome as analyzed via a multiplex approach of mass spectroscopy-based metabolomics. Food Bioscience 57, 103456 (2024)

MPG.PuRe

250.

Journal Article

Fuchs, P.; Feixes-Prats, E.; Arruda, P.; Feitosa-Araújo, E.; Fernie, A. R.; Grefen, C.; Lichtenauer, S.; Linka, N.; de Godoy Maia, I.; Meyer, A. J. et al.; Schilasky, S.; Sweetlove, L. J.; Wege, S.; Weber, A. P. M.; Millar, A. H.; Keech, O.; Florez-Sarasa, I.; Barreto, P.; Schwarzländer, M.: PLANT UNCOUPLING MITOCHONDRIAL PROTEIN 2 localizes to the Golgi. Plant Physiology 194 (2), pp. 623 - 628 (2024)

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