All Publications

Journal Article (3306)

  1. 1.
    Journal Article
    Rosa-Téllez, S.; Anoman, A.D.; Alcántara-Enguídanos, A.; Garza-Aguirre, R.A.; Alseekh, S.; Ros, R.: PGDH family genes differentially affect Arabidopsis tolerance to salt stress. Plant Science 290, 110284 (2020)
  2. 2.
    Journal Article
    Al-Aama, J.; Al Mahdi, H. B.; Salama, M. A.; Bakur, K.; Alhozali, A.; Mosli, H.; Bahijri, S. M.; Bahieldin, A.; Elango, R.; Willmitzer, L. et al.; Edris, S.: Rapid detection of type II diabetes mellitus in Saudi patients via simultaneous screening of multiple SNPs. BIOTECHNOLOGY & BIOTECHNOLOGICAL EQUIPMENT 33 (1), pp. 1319 - 1326 (2019)
  3. 3.
    Journal Article
    Amthor, J. S.; Bar-Even, A.; Hanson, A. D.; Millar, A. H.; Stitt, M.; Sweetlove, L. J.; Tyerman, S. D.: Engineering Strategies to Boost Crop Productivity by Cutting Respiratory Carbon Loss. Plant Cell 31 (2), pp. 297 - 314 (2019)
  4. 4.
    Journal Article
    Angeleska, A.; Nikoloski, Z.: Coherent network partitions. Discrete applied mathematics 266, pp. 283 - 290 (2019)
  5. 5.
    Journal Article
    Annunziata, M. G.; Ciarmiello, L. F.; Woodrow, P.; Dell'Aversana, E.; Carillo, P.: Spatial and Temporal Profile of Glycine Betaine Accumulation in Plants Under Abiotic Stresses. Frontiers in Plant Science 10 (2019)
  6. 6.
    Journal Article
    Anoman, A. D.; Flores-Tornero, M.; Benstein, R. M.; Blau, S.; Rosa-Tellez, S.; Braeutigam, A.; Fernie, A. R.; Munoz-Bertomeu, J.; Schilasky, S.; Meyer, A. J. et al.; Kopriva, S.; Segura, J.; Krueger, S.; Ros roc, R.: Deficiency in the Phosphorylated Pathway of Serine Biosynthesis Perturbs Sulfur Assimilation. Plant Physiology 180 (1), pp. 153 - 170 (2019)
  7. 7.
    Journal Article
    Armarego-Marriott, T.; Kowalewska, L.; Burgos, A.; Fischer, A.; Thiele, W.; Erban, A.; Strand, D.; Kahlau, S.; Hertle, A. P.; Kopka, J. et al.; Walther, D.; Reich, Z.; Schöttler, M. A.; Bock, R.: Highly Resolved Systems Biology to Dissect the Etioplast-to-Chloroplast Transition in Tobacco Leaves. Plant Physiology 180 (1), pp. 654 - 681 (2019)
  8. 8.
    Journal Article
    Arrivault, S.; Moraes, T. A.; Obata, T.; Medeiros, D.B.; Fernie, A. R.; Boulouis, A.; Ludwig, M.; Lunn, J. E.; Borghi, G.L.; Schlereth, A. et al.; Guenther, M.; Stitt, M.: Metabolite profiles reveal interspecific variation in operation of the Calvin–Benson cycle in both C4 and C3 plants. Journal of Experimental Botany 70 (6), pp. 1843 - 1858 (2019)
  9. 9.
    Journal Article
    Batista-Silva, W.; Medeiros, D. B.; Rodrigues-Salvador, A.; Daloso, D. M.; Omena-Garcia, R. P.; Oliveira, F. S.; Pino, L. E.; Pereira Peres, L. E.; Nunes-Nesi, A.; Fernie, A. R. et al.; Zsogon, A.; Araujo, W. L.: Modulation of auxin signalling through DIAGETROPICA and ENTIRE differentially affects tomato plant growth via changes in photosynthetic and mitochondrial metabolism. Plant, Cell and Environment 42 (2), pp. 448 - 465 (2019)
  10. 10.
    Journal Article
    Battat, M.; Eitan, A.; Rogachev, I.; Hanhineva, K.; Fernie, A. R.; Tohge, T.; Beekwilder, J.; Aharoni, A.: A MYB Triad Controls Primary and Phenylpropanoid Metabolites for Pollen Coat Patterning. Plant Physiology 180 (1), pp. 87 - 108 (2019)
  11. 11.
    Journal Article
    Bdolach, E.; Prusty, M. R.; Faigenboim-Doron, A.; Filichkin, T.; Helgerson, L.; Schmid, K. J.; Greiner, S.; Fridman, E.: Thermal plasticity of the circadian clock is under nuclear and cytoplasmic control in wild barley. Plant, Cell and Environment 42 (11), pp. 3105 - 3120 (2019)
  12. 12.
    Journal Article
    Belouah, I.; Nazaret, C.; Petriacq, P.; Prigent, S.; Benard, C.; Mengin, V.; Blein-Nicolas, M.; Denton, A. K.; Balliau, T.; Auge, S. et al.; Bouchez, O.; Mazat, J.-P.; Stitt, M.; Usadel, B.; Zivy, M.; Beauvoit, B.; Gibon, Y.; Colombie, S.: Modeling Protein Destiny in Developing Fruit. Plant Physiology 180 (3), pp. 1709 - 1724 (2019)
  13. 13.
    Journal Article
    Ben-Jabeur, M.; Vicente, R.; López-Cristoffanini, C.; Alesami, N.; Djébali, N.; Gracia-Romero, A.; Serret, M. D.; López-Carbonell, M.; Araus, J. L.; Hamada, W.: A Novel Aspect of Essential Oils: Coating Seeds with Thyme Essential Oil induces Drought Resistance in Wheat. Plants 8 (10), 371 (2019)
  14. 14.
    Journal Article
    Beshir, W. F.; Tohge, T.; Watanabe, M.; Hertog, M. L. A. T. M.; Hoefgen, R.; Fernie, A. R.; Nicolaï, B. M.: Non-aqueous fractionation revealed changing subcellular metabolite distribution during apple fruit development. Horticulture Research 6 (1), 98 (2019)
  15. 15.
    Journal Article
    Boehm, C.R.; Bock, R.: Recent Advances and Current Challenges in Synthetic Biology of the Plastid Genetic System and Metabolism. Plant Physiology 179 (3), pp. 794 - 802 (2019)
  16. 16.
    Journal Article
    Borghi, G.L.; Moraes, T. A.; Günther, M.; Feil, R.; Mengin, V.; Lunn, J. E.; Stitt, M.; Arrivault, S.: Relationship between irradiance and levels of Calvin-Benson cycle and other intermediates in the model eudicot Arabidopsis and the model monocot rice. Journal of Experimental Botany (accepted)
  17. 17.
    Journal Article
    Borghi, M.; de Souza, L. P.; Yoshida, T.; Fernie, A. R.: Flowers and climate change: a metabolic perspective. New Phytologist (accepted)
  18. 18.
    Journal Article
    Bovdilova, A.; Alexandre, B. M.; H{ö}ppner, A.; Matias Lu{í}s, I.; Alvarez, C. E.; Bickel, D.; Gohlke, H.; Decker, C.; Nagel-Steger, L.; Alseekh, S. et al.; Fernie, A. R.; Drincovich, M. F.; Abreu, I. A.; Maurino, V. G.: Posttranslational modification of the NADP-malic enzyme involved in C4 photosynthesis fine-tunes the enzymatic activity during the day. The Plant Cell (accepted)
  19. 19.
    Journal Article
    Bozek, K.; Khrameeva, E. E.; Reznick, J.; Omerbašić, D.; Bennett, N. C.; Lewin, G. R.; Azpurua, J.; Gorbunova, V.; Seluanov, A.; Regnard, P. et al.; Wanert, F.; Marchal, J.; Pifferi, F.; Aujard, F.; Liu, Z.; Shi, P.; Pääbo, S.; Schröder, F.; Willmitzer, L.; Giavalisco, P.; Khaitovich, P.: Publisher Correction: Lipidome determinants of maximal lifespan in mammals. Scientific Reports 9 (1), 6972 (2019)
  20. 20.
    Journal Article
    Brog, Y. M.; Osorio, S.; Yichie, Y.; Alseekh, S.; Bensal, E.; Kochevenko, A.; Zamir, D.; Fernie, A. R.: A Solanum neorickii introgression population providing a powerful complement to the extensively characterized Solanum pennellii population. The Plant Journal 97 (2), pp. 391 - 403 (2019)
  21. 21.
    Journal Article
    Burschel, S.; Kreuzer Decovic, D.; Nuber, F.; Stiller, M.; Hofmann, M.; Zupok, A.; Siemiatkowska, B.; Gorka, M.; Leimkühler, S.; Friedrich, T.: Iron-sulfur cluster carrier proteins involved in the assembly of Escherichia coli NADH:ubiquinone oxidoreductase (complex I). Molecular Microbiology 111 (1), pp. 31 - 45 (2019)
  22. 22.
    Journal Article
    Caldana, C.; Martins, M. C. M.; Mubeen, U.; Urrea-Castellanos, R.: The magic 'hammer' of TOR: the multiple faces of a single pathway in the metabolic regulation of plant growth and development. Journal of Experimental Botany 70 (8), pp. 2217 - 2225 (2019)
  23. 23.
    Journal Article
    Casartelli, A.; Melino, V. J.; Baumann, U.; Riboni, M.; Suchecki, R.; Jayasinghe, N. S.; Mendis, H.; Watanabe, M.; Erban, A.; Zuther, E. et al.; Hoefgen, R.; Roessner, U.; Okamoto, M.; Heuer, S.: Opposite fates of the purine metabolite allantoin under water and nitrogen limitations in bread wheat. Plant Molecular Biology 99 (4-5), pp. 477 - 497 (2019)
  24. 24.
    Journal Article
    Ceusters, N.; Luca, S.; Feil, R.; Claes, J. E.; Lunn, J. E.; Van den Ende, W.; Ceusters, J.: Hierarchical clustering reveals unique features in the diel dynamics of metabolites in the CAM orchid Phalaenopsis. Journal of Experimental Botany 70 (12), pp. 3269 - 3281 (2019)
  25. 25.
    Journal Article
    Chaves, I. d. S.; Feitosa-Araujo, E.; Florian, A.; Medeiros, D. B.; da Fonseca-Pereira, P.; Charton, L.; Heyneke, E.; Apfata, J. A. C.; Pires V, M.; Mettler-Altmann, T. et al.; Araujo, W. L.; Neuhaus, H. E.; Palmieri, F.; Obata, T.; Weber, A. P. M.; Linka, N.; Fernie, A. R.; Nunes-Nesi, A.: The mitochondrial NAD(+) transporter (NDT1) plays important roles in cellular NAD(+) homeostasis in Arabidopsis thaliana. The Plant Journal 100 (3), pp. 487 - 504 (2019)
  26. 26.
    Journal Article
    Claassens, N. J.; Cotton, C. A. R.; Kopljar, D.; Bar-Even, A.: Making quantitative sense of electromicrobial production. Nature Catalysis 2 (5), pp. 437 - 447 (2019)
  27. 27.
    Journal Article
    Claassens, N. J.; He, H.; Bar-Even, A.: Synthetic Methanol and Formate Assimilation Via Modular Engineering and Selection Strategies. CURRENT ISSUES IN MOLECULAR BIOLOGY 33, pp. 237 - 248 (2019)
  28. 28.
    Journal Article
    Claassens, N. J.; Finger-Bou, M.; Scholten, B.; Muis, F.; De Groot, J.J.; De Gier, J.-W.; De Vos, W.M.; Van Der Oost, J.: Bicistronic Design-Based Continuous and High-Level Membrane Protein Production in Escherichia coli. ACS Synthetic Biology 8 (7), pp. 1685 - 1690 (2019)
  29. 29.
    Journal Article
    Claassens, N. J.; Burgener, S.; Vögeli, B.; Erb, T.J.; Bar-Even, A.: A critical comparison of cellular and cell-free bioproduction systems. Current Opinion in Biotechnology 60, pp. 221 - 229 (2019)
  30. 30.
    Journal Article
    Claeys, H.; Vi, S. L.; Xu, X.; Satoh-Nagasawa, N.; Eveland, A. L.; Goldshmidt, A.; Feil, R.; Beggs, G. A.; Sakai, H.; Brennan, R. G. et al.; Lunn, J. E.; Jackson, D.: Control of meristem determinacy by trehalose 6-phosphate phosphatases is uncoupled from enzymatic activity. Nature Plants 5 (4), pp. 352 - 357 (2019)
  31. 31.
    Journal Article
    Clemente-Moreno, M.J.; Gago, J.; Díaz-Vivancos, P.; Bernal, A.; Miedes, E.; Bresta, P.; Liakopoulos, G.; Fernie, A. R.; Hernández, J.A.; Flexas, J.: The apoplastic antioxidant system and altered cell wall dynamics influence mesophyll conductance and the rate of photosynthesis. The Plant Journal 99 (6), pp. 1031 - 1046 (2019)
  32. 32.
    Journal Article
    Condori-Apfata, J. A.; Batista-Silva, W.; Medeiros, D. B.; Vargas, J. R.; Valente, L. M. L.; Heyneke, E.; Pérez-Diaz, J. L.; Fernie, A. R.; Araújo, W. L.; Nunes-Nesi, A.: The Arabidopsis E1 subunit of the 2-oxoglutarate dehydrogenase complex modulates plant growth and seed production. Plant Molecular Biology 101 (1), pp. 183 - 202 (2019)
  33. 33.
    Journal Article
    D´Andrea, L.; Rodriguez-Concepcion, M.: Manipulation of Plastidial Protein Quality Control Components as a New Strategy to Improve Carotenoid Contents in Tomato Fruit. Frontiers in Plant Science 10 (2019)
  34. 34.
    Journal Article
    da Fonseca-Pereira, P.; Daloso, D. M.; Gago, J.; de Oliveira Silva, F.M.; Condori-Apfata, J.A.; Florez-Sarasa, I. D.; Tohge, T.; Reichheld, J.-P.; Nunes-Nesi, A.; Fernie, A. R. et al.; Araújo, W.L.: The Mitochondrial Thioredoxin System Contributes to the Metabolic Responses Under Drought Episodes in Arabidopsis. Plant and Cell Physiology 60 (1), pp. 213 - 229 (2019)
  35. 35.
    Journal Article
    de Haro, L. A.; Arellano, S. M.; Novák, O.; Feil, R.; Dumón, A. D.; Mattio, M. F.; Tarkowská, D.; Llauger, G.; Strnad, M.; Lunn, J. E. et al.; Pearce, S.; Figueroa, C. M.; del Vas, M.: Mal de Río Cuarto virus infection causes hormone imbalance and sugar accumulation in wheat leaves. BMC Plant Biology 19 (1), 112 (2019)
  36. 36.
    Journal Article
    De Smet, B.; Willems, P.; Fernandez-Fernandez, A. D.; Alseekh, S.; Fernie, A. R.; Messens, J.; Van Breusegem, F.: In vivo detection of protein cysteine sulfenylation in plastids. The Plant Journal 97 (4), pp. 765 - 778 (2019)
  37. 37.
    Journal Article
    de Souza, L. P.; Scossa, F.; Proost, S.; Bitocchi, E.; Papa, R.; Tohge, T.; Fernie, A. R.: Multi-tissue integration of transcriptomic and specialized metabolite profiling provides tools for assessing the common bean (Phaseolus vulgaris) metabolome. The Plant Journal 97 (6), pp. 1132 - 1153 (2019)
  38. 38.
    Journal Article
    Decros, G.; Beauvoit, B.; Colombié, S.; Cabasson, C.; Bernillon, S.; Arrivault, S.; Guenther, M.; Belouha, I.; Prigent, S.; Gibon, Y. et al.; Pétriacq, Y.: Regulation of pyridine nucleotide metabolism during tomato fruit development through transcript and protein profiling. Frontiers in Plant Science (accepted)
  39. 39.
    Journal Article
    Dong, Z.; Xiao, Y.; Govindarajulu, R.; Feil, R.; Siddoway, M. L.; Nielsen, T.; Lunn, J. E.; Hawkins, J.; Whipple, C.; Chuck, G.: The regulatory landscape of a core maize domestication module controlling bud dormancy and growth repression. Nature Communications 10 (1), 3810 (2019)
  40. 40.
    Journal Article
    Erban, A.; Fehrle, I.; Martinez-Seidel, F.; Brigante, F.; Más, A. L.; Baroni, V.; Wunderlin, D.; Kopka, J.: Discovery of food identity markers by metabolomics and machine learning technology. Scientific Reports 9 (1), 9697 (2019)
  41. 41.
    Journal Article
    Fàbregas, N.; Fernie, A. R.: The metabolic response to drought. Journal of Experimental Botany 70 (4), pp. 1077 - 1085 (2019)
  42. 42.
    Journal Article
    Fang, C.; Fernie, A. R.; Luo, J.: Exploring the Diversity of Plant Metabolism. Trends in Plant Science 24 (1), pp. 83 - 98 (2019)
  43. 43.
    Journal Article
    Fernie, A. R.: Resolving the role of strigolactone in the early steps of rice axillary bud dormancy. The Plant Journal 97 (6), pp. 1003 - 1005 (2019)
  44. 44.
    Journal Article
    Fernie, A. R.; Gutierrez-Marcos, J.: From genome to phenome: genome-wide association studies and other approaches that bridge the genotype to phenotpe gap. Plant Journal 97 (1), pp. 5 - 7 (2019)
  45. 45.
    Journal Article
    Fernie, A. R.: Evolution: An Early Role for Flavonoids in Defense against Oomycete Infection. Current Biology 29 (14), pp. R688 - R690 (2019)
  46. 46.
    Journal Article
    Fernie, A. R.; Yan, J.: De Novo Domestication: An Alternative Route toward New Crops for the Future. Molecular Plant 12 (5), pp. 615 - 631 (2019)
  47. 47.
    Journal Article
    Ferrari, C.; Proost, S.; Janowski, M.; Becker, J.; Nikoloski, Z.; Bhattacharya, D.; Price, D.; Tohge, T.; Bar-Even, A.; Fernie, A. R. et al.; Stitt, M.; Mutwil, M.: Kingdom-wide comparison reveals the evolution of diurnal gene expression in Archaeplastida. Nature Communications 10 (2019)
  48. 48.
    Journal Article
    Flis, A.; Mengin, V.; Ivakov, A.; Mugford, S.T.; Hubberten, H. M.; Encke, B.; Krohn, N.; Höhne, M.; Feil, R.; Hoefgen, R. et al.; Lunn, J. E.; Millar, A.J.; Smith, A.M.; Sulpice, R.; Stitt, M.: Multiple circadian clock outputs regulate diel turnover of carbon and nitrogen reserves. Plant, Cell and Environment 42 (2), pp. 549 - 573 (2019)
  49. 49.
    Journal Article
    Flores-Tornero, M.; Proost, S.; Mutwil, M.; Scutt, C. P.; Dresselhaus, T.; Sprunck, S.: Transcriptomics of manually isolated Amborella trichopoda egg apparatus cells. Plant Reproduction 32 (1-SI), pp. 15 - 27 (2019)
  50. 50.
    Journal Article
    Florez-Sarasa, I. D.; Obata, T.; Del-Saz, N. F.; Reichheld, J.-P.; Meyer, E. H.; Rodriguez-Concepcion, M.; Ribas-Carbo, M.; Fernie, A. R.: The Lack of Mitochondrial Thioredoxin TRXo1 Affects In Vivo Alternative Oxidase Activity and Carbon Metabolism under Different Light Conditions. Plant and Cell Physiology 60 (11), pp. 2369 - 2381 (2019)
 
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