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Journal Article (3195)

  1. 1.
    Journal Article
    Amthor, J. S.; Bar-Even, A.; Hanson, A. D.; Millar, A. H.; Stitt, M.; Sweetlove, L. J.; Tyerman, S. D.: Engineering Strategies to Boost Crop Productivity by Cutting Respiratory Carbon Loss. Plant Cell 31 (2), pp. 297 - 314 (2019)
  2. 2.
    Journal Article
    Annunziata, M. G.; Ciarmiello, L. F.; Woodrow, P.; Dell'Aversana, E.; Carillo, P.: Spatial and Temporal Profile of Glycine Betaine Accumulation in Plants Under Abiotic Stresses. Frontiers in Plant Science 10, 230 (2019)
  3. 3.
    Journal Article
    Arrivault, S.; Moraes, T. A.; Obata, T.; Medeiros, D.B.; Fernie, A. R.; Boulouis, A.; Ludwig, M.; Lunn, J. E.; Borghi, G.L.; Schlereth, A. et al.; Guenther, M.; Stitt, M.: Metabolite profiles reveal interspecific variation in operation of the Calvin–Benson cycle in both C4 and C3 plants. Journal of Experimental Botany 70 (6), pp. 1843 - 1858 (2019)
  4. 4.
    Journal Article
    Batista-Silva, W.; Medeiros, D. B.; Rodrigues-Salvador, A.; Daloso, D. M.; Omena-Garcia, R. P.; Oliveira, F. S.; Pino, L. E.; Pereira Peres, L. E.; Nunes-Nesi, A.; Fernie, A. R. et al.; Zsogon, A.; Araujo, W. L.: Modulation of auxin signalling through DIAGETROPICA and ENTIRE differentially affects tomato plant growth via changes in photosynthetic and mitochondrial metabolism. Plant, Cell and Environment 42 (2), pp. 448 - 465 (2019)
  5. 5.
    Journal Article
    Boehm, C.R.; Bock, R.: Recent Advances and Current Challenges in Synthetic Biology of the Plastid Genetic System and Metabolism. Plant Physiology 179 (3), pp. 794 - 802 (2019)
  6. 6.
    Journal Article
    Bozek, K.; Khrameeva, E. E.; Reznick, J.; Omerbasic, D.; Bennett, N. C.; Lewin, G. R.; Azpurua, J.; Gorbunova, V.; Seluanov, A.; Regnard, P. et al.; Wanert, F.; Marchal, J.; Pifferi, F.; Aujard, F.; Liu, Z.; Shi, P.; Paeaebo, S.; Schröder, F.; Willmitzer, L.; Giavalisco, P.; Khaitovich, P.: Publisher Correction: Lipidome determinants of maximal lifespan in mammals (vol 7, 5, 2017). Scientific Reports 9, 6972 (2019)
  7. 7.
    Journal Article
    Brog, Y. M.; Osorio, S.; Yichie, Y.; Alseekh, S.; Bensal, E.; Kochevenko, A.; Zamir, D.; Fernie, A. R.: A Solanum neorickii introgression population providing a powerful complement to the extensively characterized Solanum pennellii population. The Plant Journal 97 (2), pp. 391 - 403 (2019)
  8. 8.
    Journal Article
    Caldana, C.; Martins, M. C. M.; Mubeen, U.; Urrea-Castellanos, R.: The magic 'hammer' of TOR: the multiple faces of a single pathway in the metabolic regulation of plant growth and development. Journal of Experimental Botany 70 (8), pp. 2217 - 2225 (2019)
  9. 9.
    Journal Article
    Casartelli, A.; Melino, V. J.; Baumann, U.; Riboni, M.; Suchecki, R.; Jayasinghe, N. S.; Mendis, H.; Watanabe, M.; Erban, A.; Zuther, E. et al.; Hoefgen, R.; Roessner, U.; Okamoto, M.; Heuer, S.: Opposite fates of the purine metabolite allantoin under water and nitrogen limitations in bread wheat. Plant Molecular Biology 99 (4-5), pp. 477 - 497 (2019)
  10. 10.
    Journal Article
    Claeys, H.; Vi, S. L.; Xu, X.; Satoh-Nagasawa, N.; Eveland, A. L.; Goldshmidt, A.; Feil, R.; Beggs, G. A.; Sakai, H.; Brennan, R. G. et al.; Lunn, J. E.; Jackson, D.: Control of meristem determinacy by trehalose 6-phosphate phosphatases is uncoupled from enzymatic activity. Nature Plants 5 (4), pp. 352 - 357 (2019)
  11. 11.
    Journal Article
    da Fonseca-Pereira, P.; Daloso, D. M.; Gago, J.; de Oliveira Silva, F.M.; Condori-Apfata, J.A.; Florez-Sarasa, I. D.; Tohge, T.; Reichheld, J.-P.; Nunes-Nesi, A.; Fernie, A. R. et al.; Araújo, W.L.: The Mitochondrial Thioredoxin System Contributes to the Metabolic Responses Under Drought Episodes in Arabidopsis. Plant amp; cell physiology 60 (1), pp. 213 - 229 (2019)
  12. 12.
    Journal Article
    de Haro, L. A.; Arellano, S. M.; Novák, O.; Feil, R.; Dumón, A. D.; Mattio, M. F.; Tarkowská, D.; Llauger, G.; Strnad, M.; Lunn, J. E. et al.; Pearce, S.; Figueroa, C. M.; del Vas, M.: Mal de Río Cuarto virus infection causes hormone imbalance and sugar accumulation in wheat leaves. BMC Plant Biology 19 (1), 112 (2019)
  13. 13.
    Journal Article
    De Smet, B.; Willems, P.; Fernandez-Fernandez, A. D.; Alseekh, S.; Fernie, A. R.; Messens, J.; Van Breusegem, F.: In vivo detection of protein cysteine sulfenylation in plastids. The Plant Journal 97 (4), pp. 765 - 778 (2019)
  14. 14.
    Journal Article
    de Souza, L. P.; Scossa, F.; Proost, S.; Bitocchi, E.; Papa, R.; Tohge, T.; Fernie, A. R.: Multi-tissue integration of transcriptomic and specialized metabolite profiling provides tools for assessing the common bean (Phaseolus vulgaris) metabolome. The Plant Journal 97 (6), pp. 1132 - 1153 (2019)
  15. 15.
    Journal Article
    Fàbregas, N.; Fernie, A. R.: The metabolic response to drought. Journal of Experimental Botany 70 (4), pp. 1077 - 1085 (2019)
  16. 16.
    Journal Article
    Fang, C.; Fernie, A. R.; Luo, J.: Exploring the Diversity of Plant Metabolism. Trends in Plant Science 24 (1), pp. 83 - 98 (2019)
  17. 17.
    Journal Article
    Fernie, A. R.; Gutierrez-Marcos, J.: From genome to phenome: genome-wide association studies and other approaches that bridge the genotype to phenotpe gap. Plant Journal 97 (1), pp. 5 - 7 (2019)
  18. 18.
    Journal Article
    Fernie, A. R.; Yan, J.: De Novo Domestication: An Alternative Route toward New Crops for the Future. Molecular Plant 12 (5), pp. 615 - 631 (2019)
  19. 19.
    Journal Article
    Ferrari, C.; Proost, S.; Janowski, M.; Becker, J.; Nikoloski, Z.; Bhattacharya, D.; Price, D.; Tohge, T.; Bar-Even, A.; Fernie, A. R. et al.; Stitt, M.; Mutwil, M.: Kingdom-wide comparison reveals the evolution of diurnal gene expression in Archaeplastida. Nature Communications 10, 737 (2019)
  20. 20.
    Journal Article
    Flis, A.; Mengin, V.; Ivakov, A.; Mugford, S.T.; Hubberten, H. M.; Encke, B.; Krohn, N.; Höhne, M.; Feil, R.; Hoefgen, R. et al.; Lunn, J. E.; Millar, A.J.; Smith, A.M.; Sulpice, R.; Stitt, M.: Multiple circadian clock outputs regulate diel turnover of carbon and nitrogen reserves. Plant, Cell and Environment 42 (2), pp. 549 - 573 (2019)
  21. 21.
    Journal Article
    Flores-Tornero, M.; Proost, S.; Mutwil, M.; Scutt, C. P.; Dresselhaus, T.; Sprunck, S.: Transcriptomics of manually isolated Amborella trichopoda egg apparatus cells. Plant Reproduction 32 (1-SI), pp. 15 - 27 (2019)
  22. 22.
    Journal Article
    Goehring, I.; Sauter, N. S.; Catchpole, G.; Assmann, A.; Shu, L.; Zien, K. S.; Moehlig, M.; Pfeiffer, A. F. H.; Oberholzer, J.; Willmitzer, L. et al.; Spranger, J.; Maedler, K.: Correction to: Identification of an intracellular metabolic signature impairing beta cell function in the rat beta cell line INS-1E and human islets. Diabetologia 62 (3), pp. 553 - 554 (2019)
  23. 23.
    Journal Article
    Goehring, I.; Sauter, N. S.; Catchpole, G.; Assmann, A.; Shu, L.; Zien, K. S.; Moehlig, M.; Pfeiffer, A. F. H.; Oberholzer, J.; Willmitzer, L. et al.; Spranger, J.; Maedler, K.: Identification of an intracellular metabolic signature impairing beta cell function in the rat beta cell line INS-1E and human islets (vol 54, pg 2584, 2011). Diabetologia 62 (3), pp. 553 - 554 (2019)
  24. 24.
    Journal Article
    Kaiser, E.; Ouzounis, T.; Giday, H.; Schipper, R.; Heuvelink, E.; Marcelis, L.F.M.: Adding blue to red supplemental light increases biomass and yield of greenhouse-grown tomatoes, but only to an optimum. Frontiers in Plant Science 9, 2002 (2019)
  25. 25.
    Journal Article
    Kaiser, E.; Weerheim, K.; Schipper, R.; Dieleman, J. A.: Partial replacement of red and blue by green light increases biomass and yield in tomato. Scientia Horticulturae 249, pp. 271 - 279 (2019)
  26. 26.
    Journal Article
    Kesten, C.; Wallmann, A.; Schneider, R.; McFarlane, H. E.; Diehl, A.; Khan, G. A.; van Rossum, B.-J.; Lampugnani, E. R.; Szymanski, W. G.; Cremer, N. et al.; Schmieder, P.; Ford, K. L.; Seiter, F.; Heazlewood, J. L.; Sanchez-Rodriguez, C.; Oschkinat, H.; Persson, S.: The companion of cellulose synthase 1 confers salt tolerance through a Tau-like mechanism in plants. Nature Communications 10 (1), 857 (2019)
  27. 27.
    Journal Article
    Koubaa, S.; Bremer, A.; Hincha, D. K.; Brini, F.: Structural properties and enzyme stabilization function of the intrinsically disordered LEA_4 protein TdLEA3 from wheat. Scientific Reports 9 (1), 3720 (2019)
  28. 28.
    Journal Article
    Kubis, A.; Bar-Even, A.: Synthetic biology approaches for improving photosynthesis. Journal of Experimental Botany 70 (5), pp. 1425 - 1433 (2019)
  29. 29.
    Journal Article
    Kudo, M.; Kidokoro, S.; Yoshida, T.; Mizoi, J.; Kojima, M.; Takebayashi, Y.; Sakakibara, H.; Fernie, A. R.; Shinozaki, K.; Yamaguchi-Shinozaki, K.: A gene-stacking approach to overcome the trade-off between drought stress tolerance and growth in Arabidopsis. The Plant Journal 97 (2), pp. 240 - 256 (2019)
  30. 30.
    Journal Article
    Küken, A.; Eloundou-Mbebi, J. M. O.; Basler, G.; Nikoloski, Z.: Cellular determinants of metabolite concentration ranges. PLoS Computational Biology 15 (1), e1006687 (2019)
  31. 31.
    Journal Article
    Küken, A.; Nikoloski, Z.: Computational Approaches to Design and Test Plant Synthetic Metabolic Pathways. Plant Physiology 179 (3), pp. 894 - 906 (2019)
  32. 32.
    Journal Article
    Laitinen, R.; Nikoloski, Z.: Genetic basis of plasticity in plants. Journal of Experimental Botany 70 (3), pp. 739 - 745 (2019)
  33. 33.
    Journal Article
    Lazare, S.; Bechar, D.; Fernie, A. R.; Brotman, Y.; Zaccai, M.: The proof is in the bulb: glycerol influences key stages of lily development. The Plant Journal 97 (2), pp. 321 - 340 (2019)
  34. 34.
    Journal Article
    Levey, M.; Timm, S.; Mettler-Altmann, T.; Borghi, G.L.; Koczor, M.; Arrivault, S.; Pm Weber, A.; Bauwe, H.; Gowik, U.; Westhoff, P.: Efficient 2-phosphoglycolate degradation is required to maintain carbon assimilation and allocation in the C4 plant Flaveria bidentis. Journal of Experimental Botany 70 (2), pp. 575 - 587 (2019)
  35. 35.
    Journal Article
    Li, J.; Tietz, S.; Cruz, J. A.; Strand, D.; Xu, Y.; Chen, J.; Kramer, D. M.; Hu, J.: Photometric screens identified Arabidopsis peroxisome proteins that impact photosynthesis under dynamic light conditions. PLANT JOURNAL 97 (3), pp. 460 - 474 (2019)
  36. 36.
    Journal Article
    Li, M.; Keenan, C. R.; Lopez-Campos, G.; Mangum, J. E.; Chen, Q.; Prodanovic, D.; Xia, Y. C.; Langenbach, S. Y.; Harris, T.; Hofferek, V. et al.; Reid, G. E.; Stewart, A. G.: A Non-canonical Pathway with Potential for Safer Modulation of Transforming Growth Factor-beta 1 in Steroid-Resistant Airway Diseases. ISCIENCE 12, pp. 232 - 246 (2019)
  37. 37.
    Journal Article
    Li, Y.; Lu, Y.; Li, L.; Chu, Z.; Zhang, H.; Li, H.; Fernie, A. R.; Ouyang, B.: Impairment of hormone pathways results in a general disturbance of fruit primary metabolism in tomato. Food Chemistry 274, pp. 170 - 179 (2019)
  38. 38.
    Journal Article
    Liang, Y.; Kong, F.; Torres-Romero, I.; Burlacot, A.; Cuine, S.; Légeret, B.; Billon, E.; Brotman, Y.; Alseekh, S.; Fernie, A. R. et al.; Beisson, F.; Peltier, G.; Li-Beisson, Y.: Branched-Chain Amino Acid Catabolism Impacts Triacylglycerol Homeostasis in Chlamydomonas reinhardtii. Plant Physiology 179 (4), pp. 1502 - 1514 (2019)
  39. 39.
    Journal Article
    Ligas, J.; Pineau, E.; Bock, R.; Huynen, M. A.; Meyer, E. H.: The assembly pathway of complex I in Arabidopsis thaliana. The Plant Journal 97 (3), pp. 447 - 459 (2019)
  40. 40.
    Journal Article
    Lortzing, V.; Oberlaender, J.; Lortzing, T.; Tohge, T.; Steppuhn, A.; Kunze, R.; Hilker, M.: Insect egg deposition renders plant defence against hatching larvae more effective in a salicylic acid-dependent manner. Plant, Cell and Environment 42 (3 - SI), pp. 1019 - 1032 (2019)
  41. 41.
    Journal Article
    Machin, F. Q.; Beckers, M.; Tian, X.; Fairnie, A.; Cheng, T.; Scheible, W.-R.; Doerner, P.: Inducible reporter/driver lines for the Arabidopsis root with intrinsic reporting of activity state. The Plant Journal 98 (1), pp. 153 - 164 (2019)
  42. 42.
    Journal Article
    Martins, A. O.; Omena-Garcia, R. P.; Oliveira, F. S.; Silva, W. A.; Hajirezaei, M.-R.; Vallarino, J. G.; Ribeiro, D. M.; Fernie, A. R.; Nunes-Nesi, A.; Araujo, W. L.: Differential root and shoot responses in the metabolism of tomato plants exhibiting reduced levels of gibberellin. Environmental and Experimental Botany 157, pp. 331 - 343 (2019)
  43. 43.
    Journal Article
    Matz, J. M.; Watanabe, M.; Falade, M.; Tohge, T.; Hoefgen, R.; Matuschewski, K.: Plasmodium Para-Aminobenzoate Synthesis and Salvage Resolve Avoidance of Folate Competition and Adaptation to Host Diet. Cell Reports 26 (2), pp. 356 - 363 (2019)
  44. 44.
    Journal Article
    Medeiros, D.B.; da Luz, L.M.; de Oliveira, H.O.; Araújo, W.L.; Daloso, D.M.; Fernie, A. R.: Metabolomics for understanding stomatal movements. Theoretical and Experimental Plant Physiology 31 (1), pp. 91 - 102 (2019)
  45. 45.
    Journal Article
    Moraes, T. A.; Mengin, V.; Annunziata, M. G.; Encke, B.; Krohn, N.; Höhne, M.; Stitt, M.: Response of the Circadian Clock and Diel Starch Turnover to One Day of Low Light or Low CO2. Plant Physiology 179 (4), pp. 1457 - 1478 (2019)
  46. 46.
    Journal Article
    Moreno, J.C.: The proteOMIC era: a useful tool to gain deeper insights into plastid physiology. Theoretical and Experimental Plant Physiology 31 (1), pp. 157 - 171 (2019)
  47. 47.
    Journal Article
    Murik, O.; Tirichine, L.; Prihoda, J.; Thomas, Y.; Araujo, W. L.; Allen, A. E.; Fernie, A. R.; Bowler, C.: Downregulation of mitochondrial alternative oxidase affects chloroplast function, redox status and stress response in a marine diatom. New Phytologist 221 (3), pp. 1303 - 1316 (2019)
  48. 48.
    Journal Article
    Naake, T.; Fernie, A. R.: MetNet: Metabolite Network Prediction from High-Resolution Mass Spectrometry Data in R Aiding Metabolite Annotation. Analytical Chemistry 91 (3), pp. 1768 - 1772 (2019)
  49. 49.
    Journal Article
    Nieuwkoop, T.; Claassens, N. J.; van der Oost, J.: Improved protein production and codon optimization analyses in Escherichia coli by bicistronic design. Microbial Biotechnology 12 (1), pp. 173 - 179 (2019)
  50. 50.
    Journal Article
    Nunes-Nesi, A.; Alseekh, S.; de Silva, O.; Magnum, F.; Omranian, N.; Lichtenstein, G.; Mirnezhad, M.; González, R. R. R.; Garcia, J. S. y.; Conte, M. et al.; Leiss, K. A.; Klinkhamer, P. G. L.; Nikoloski, Z.; Carrari, F.; Fernie, A. R.: Identification and characterization of metabolite quantitative trait loci in tomato leaves and comparison with those reported for fruits and seeds. Metabolomics 15 (4), 46 (2019)
 
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