Journal Article (174)

151.
Journal Article
Vallarino, J. G.; de Abreu e Lima, F.; Soria, C.; Tong, H.; Pott, D. M.; Willmitzer, L.; Fernie, A. R.; Nikoloski, Z.; Osorio, S.: Genetic diversity of strawberry germplasm using metabolomic biomarkers. Scientific Reports 8 (1), 14386 (2018)
152.
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van Oort, B.; Roy, L. M.; Xu, P.; Lu, Y.; Karcher, D.; Bock, R.; Croce, R.: Revisiting the Role of Xanthophylls in Nonphotochemical Quenching. The Journal of Physical Chemistry Letters 9 (2), pp. 346 - 352 (2018)
153.
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Verbančič, J.; Lunn, J. E.; Stitt, M.; Persson, S.: Carbon Supply and the Regulation of Cell Wall Synthesis. Molecular Plant 11 (1), pp. 75 - 94 (2018)
154.
Journal Article
Veyel, D.; Sokolowska, E.; Moreno, J.C.; Kierszniowska, S.; Cichon, J.; Wojciechowska, I.; Luzarowski, M.; Kosmacz, M.; Szlachetko, J.; Gorka, M. et al.; Meret, M.; Graf, A.; Meyer, E. H.; Willmitzer, L.; Skirycz, A.: PROMIS, global analysis of PROtein-metabolite interactions using size separation in Arabidopsis thaliana. The Journal of Biological Chemistry 293 (32), pp. 12440 - 12453 (2018)
155.
Journal Article
Virginia Osella, A.; Alberto Mengarelli, D.; Mateos, J.; Dong, S.; Yanovsky, M. J.; Balazadeh, S.; Marta Valle, E.; Ines Zanor, M.: FITNESS, a CCT domain-containing protein, deregulates reactive oxygen species levels and leads to fine-tuning trade-offs between reproductive success and defence responses in Arabidopsis. Plant, Cell and Environment 41 (10), pp. 2328 - 2341 (2018)
156.
Journal Article
Wang, Y.; Lysoe, E.; Armarego-Marriott, T.; Erban, A.; Paruch, L.; Van Eerde, A.; Bock, R.; Liu-Clarke, J.: Transcriptome and metabolome analyses provide insights into root and root-released organic anion responses to phosphorus deficiency in oat. Journal of Experimental Botany 69 (15), pp. 3759 - 3771 (2018)
157.
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Watanabe, M.; Netzer, F.; Tohge, T.; Orf, I.; Brotman, Y.; Dubbert, D.; Fernie, A. R.; Rennenberg, H.; Hoefgen, R.; Herschbach, C.: Metabolome and Lipidome Profiles of Populus x canescens Twig Tissues During Annual Growth Show Phospholipid- Linked Storage and Mobilization of C, N, and S. Frontiers in Plant Science 9, 1292 (2018)
158.
Journal Article
Watanabe, M.; Tohge, T.; Fernie, A. R.; Hoefgen, R.: The Effect of Single and Multiple SERAT Mutants on Serine and Sulfur Metabolism. Frontiers in Plant Science 9, 702 (2018)
159.
Journal Article
Watanabe, Y.; Schneider, R.; Barkwill, S.; Gonzales-Vigil, E.; Hill Jr., J. L.; Samuels, A. L.; Persson, S.; Mansfield, S. D.: Cellulose synthase complexes display distinct dynamic behaviors during xylem transdifferentiation. Proceedings of the National Academy of Sciences of the United States of America 115 (27), pp. E6366 - E6374 (2018)
160.
Journal Article
Wen, W.; Jin, M.; Li, K.; Liu, H.; Xiao, Y.; Zhao, M.; Alseekh, S.; Li, W.; de Abreu e Lima, F.; Brotman, Y. et al.; Willmitzer, L.; Fernie, A. R.; Yan, J.: An integrated multi-layered analysis of the metabolic networks of different tissues uncovers key genetic components of primary metabolism in maize. The Plant Journal 93 (6), pp. 1116 - 1128 (2018)
161.
Journal Article
Whitcomb, S. J.; Nguyen, H. C.; Brückner, F.; Hesse, H.; Hoefgen, R.: CYSTATHIONINE GAMMA-SYNTHASE activity in rice is developmentally regulated and strongly correlated with sulfate. Plant Science 270, pp. 234 - 244 (2018)
162.
Journal Article
Winter, N.; Kragler, F.: Conceptual and Methodological Considerations on mRNA and Proteins as Intercellular and Long-Distance Signals. Plant and Cell Physiology 59 (9), pp. 1700 - 1713 (2018)
163.
Journal Article
Wu, G.; Chalvin, C.; Hölscher, M.; Meyer, E. H.; Wu, X. N.; Bock, R.: Control of Retrograde Signaling by Rapid Turnover of GENOMES UNCOUPLED1. Plant Physiology 176 (3), pp. 2472 - 2495 (2018)
164.
Journal Article
Wu, S.; Tohge, T.; Cuadros-Inostroza, A. C.; Tong, H.; Tenenboim, H.; Kooke, R.; Méret, M.; Keurentjes, J. B.; Nikoloski, Z.; Fernie, A. R. et al.; Willmitzer, L.; Brotman, Y.: Mapping the Arabidopsis Metabolic Landscape by Untargeted Metabolomics at Different Environmental Conditions. Molecular Plant 11 (1), pp. 118 - 134 (2018)
165.
Journal Article
Yan, W.; Chen, D.; Smaczniak, C.; Engelhorn, J.; Liu, H.; Yang, W.; Graf, A.; Carles, C. C.; Zhou, D.-X.; Kaufmann, K.: Dynamic and spatial restriction of Polycomb activity by plant histone demethylases. Nature Plants 4 (9), pp. 681 - 689 (2018)
166.
Journal Article
Yishai, O.; Bouzon, M.; Doering, V.; Bar-Even, A.: In Vivo Assimilation of One-Carbon via a Synthetic Reductive Glycine Pathway in Escherichia coli. ACS Synthetic Biology 7 (9), pp. 2023 - 2028 (2018)
167.
Journal Article
Yoshida, T.; Fernie, A. R.: Remote Control of Transpiration via ABA. Trends in Plant Science 23 (9), pp. 755 - 758 (2018)
168.
Journal Article
Zhai, Z.; Keereetaweep, J.; Liu, H.; Feil, R.; Lunn, J. E.; Shanklin, J.: Trehalose 6-Phosphate Positively Regulates Fatty Acid Synthesis by Stabilizing WRINKLED1. The Plant Cell 30 (10), pp. 2616 - 2627 (2018)
169.
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Zhang, Y.; Fernie, A. R.: On the role of the tricarboxylic acid cycle in plant productivity. Journal of Integrative Plant Biology 60 (12 - SI), pp. 1199 - 1216 (2018)
170.
Journal Article
Zhang, Y.; Giuliani, R.; Zhang, Y.; Zhang, Y.; Araujo, W. L.; Wang, B.; Liu, P.; Sun, Q.; Cousins, A.; Edwards, G. et al.; Fernie, A. R.; Brutnell, T. P.; Li, P.: Characterization of maize leaf pyruvate orthophosphate dikinase using high throughput sequencing. Journal of Integrative Plant Biology 60 (8), pp. 670 - 690 (2018)
171.
Journal Article
Zhang, Y.; Swart, C.; Alseekh, S.; Scossa, F.; Jiang, L.; Obata, T.; Graf, A.; Fernie, A. R.: The Extra-Pathway Interactome of the TCA Cycle: Expected and Unexpected Metabolic Interactions. Plant Physiology 177 (3), pp. 966 - 979 (2018)
172.
Journal Article
Zhang, Y.; Zhang, Y.; McFarlane, H. E.; Obata, T.; Richter, A. S.; Lohse, M.; Grimm, B.; Persson, S.; Fernie, A. R.; Giavalisco, P.: Inhibition of TOR Represses Nutrient Consumption, Which Improves Greening after Extended Periods of Etiolation. Plant Physiology 178 (1), pp. 101 - 117 (2018)
173.
Journal Article
Zhu, G.; Wang, S.; Huang, Z.; Zhang, S.; Liao, Q.; Zhang, C.; Lin, T.; Qin, M.; Peng, M.; Yang, C. et al.; Cao, X.; Han, X.; Wang, X.; van der Knaap, E.; Zhang, Z.; Cui, X.; Klee, H.; Fernie, A. R.; Luo, J.; Huang, S.: Rewiring of the Fruit Metabolome in Tomato Breeding. Cell 172 (1), pp. 249 - 261.e12 (2018)
174.
Journal Article
Zoschke, R.; Bock, R.: Chloroplast Translation: Structural and Functional Organization, Operational Control, and Regulation. Plant Cell 30 (4), pp. 745 - 770 (2018)

Book Chapter (13)

175.
Book Chapter
Alseekh, S.; Wu, S.; Brotman, Y.; Fernie, A. R.: Guidelines for Sample Normalization to Minimize Batch Variation for Large-Scale Metabolic Profiling of Plant Natural Genetic Variance. In: Methods in Molecular Biology, Vol. 1778, pp. 33 - 46 (Ed. António, C.). Humana Press, Clifton, N.J. (2018)
176.
Book Chapter
de Abreu e Lima, F.; Leifels, L.; Nikoloski, Z.: Regression-Based Modeling of Complex Plant Traits Based on Metabolomics Data. In: Plant Metabolomics: Methods and Protocols, pp. 321 - 327 (Ed. António, C.). Humana Press, New York (2018)
177.
Book Chapter
de Souza, L. P.; Fernie, A. R.; Tohge, T.: Carbon Atomic Survey for Identification of Selected Metabolic Fluxes. In: Methods in Molecular Biology, Vol. 1778, pp. 59 - 70 (Ed. António, C.). Humana Press, Clifton, N.J. (2018)
178.
Book Chapter
Feil, R.; Lunn, J. E.: Quantification of Soluble Sugars and Sugar Alcohols by LC-MS/MS. In: Methods in Molecular Biology, Vol. 1778, pp. 87 - 100 (Ed. Walker, J. M.). Humana Press, Clifton, N.J. (2018)
179.
Book Chapter
Hoffmam, Z. B.; da Silva, V. C. H.; Martins, M. C. M.; Caldana, C.: Applications of Mass Spectrometry in Synthetic Biology. In: Mass Spectrometry in Chemical Biology: Evolving Applications, pp. 159 - 172. Royal Society of Chemistry, Cambridge (2018)
180.
Book Chapter
Martins, M. C. M.; Caldana, C.; Wolf, L. D.; de Abreu, L. G. F.: The Importance of Experimental Design, Quality Assurance, and Control in Plant Metabolomics Experiments. In: Methods in Molecular Biology, Vol. 1778, pp. 3 - 18 (Ed. António, C.). Humana Press, Clifton, N.J. (2018)
181.
Book Chapter
Salem, M.A.; Giavalisco, P.: Semi-targeted Lipidomics of Plant Acyl Lipids Using UPLC-HR-MS in Combination with a Data-Independent Acquisition Mode. In: Methods in Molecular Biology, Vol. 1778, pp. 137 - 156 (Ed. Walker, J. M.). Humana Press, Clifton, N.J. (2018)
182.
Book Chapter
Stuchfield, D.; France, A. P.; Migas, L. G.; Thalhammer, A.; Bremer, A.; Bellina, B.; Barran, P. E.: The Use of Mass Spectrometry to Examine IDPs: Unique Insights and Caveats. In: INTRINSICALLY DISORDERED PROTEINS, pp. 459 - 502 (Ed. Rhoades, E.). Academic Press, Cambridge, MA (2018)
183.
Book Chapter
Takahashi, D.; Uemura, M.; Kawamura, Y.: Freezing tolerance of plant cells: From the aspect of plasma membrane and microdomain. In: Advances in Experimental Medicine and Biology, Vol. 1081, pp. 61 - 79 (Eds. Cohen, I. R.; Lajtha, A.; Lambris, J. D.; Paoletti, R.; Rezaei, N.). Springer Nature, Singapore (2018)
184.
Book Chapter
Vallarino, J. G.; Erban, A.; Fehrle, I.; Fernie, A. R.; Kopka, J.; Osorio, S.: Acquisition of Volatile Compounds by Gas Chromatography–Mass Spectrometry (GC-MS). In: Methods in Molecular Biology, Vol. 1778, pp. 225 - 240 (Ed. António, C.). Humana Press, Clifton, N.J. (2018)
185.
Book Chapter
Watanabe, M.; Tohge, T.; Balazadeh, S.; Erban, A.; Giavalisco, P.; Kopka, J.; Mueller-Roeber, B.; Fernie, A. R.; Hoefgen, R.: Comprehensive Metabolomics Studies of Plant Developmental Senescence. In: Plant Senescence: Methods and Protocols, pp. 339 - 358 (Ed. Guo, Y.). Springer New York, New York, NY (2018)
186.
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Wenk, S.; Yishai, O.; Lindner, S. N.; Bar-Even, A.: An Engineering Approach for Rewiring Microbial Metabolism. In: ENZYMES IN SYNTHETIC BIOLOGY, pp. 329 - 367 (Ed. Scrutton, N.). Academic Press, Cambridge, MA (2018)
187.
Book Chapter
Zuther, E.; Lee, Y. P.; Erban, A.; Kopka, J.; Hincha, D. K.: Natural Variation in Freezing Tolerance and Cold Acclimation Response in Arabidopsis thaliana and Related Species. In: Survival Strategies in Extreme Cold and Desiccation: Adaptation Mechanisms and Their Applications, pp. 81 - 98 (Eds. Iwaya-Inoue, M.; Sakurai, M.; Uemura, M.). Springer Singapore, Singapore (2018)

Meeting Abstract (3)

188.
Meeting Abstract
Clarke, J. L.; Branza-Nichita, N.; Stavaru, C. S.; Sivertsen, A.; Steen, H.; Paruch, L.; Eerde, A.; Heldal, I.; Dobrica, M.-O.; Tucureanu, C. et al.; Onu, A.; Ciulean, S.; Petrareanu, C.; Lazar, C.; Popescu, I.; Haugslien, S.; Bock, R.; Dubuisson, J.: Lettuce-produced hepatitis C virus E1E2 heterodimer triggers immune responses in mice and antibody production after oral vaccination. In In vitro cellular & developmental biology-plant, 54 (Supplement 1), pp. S118 - S119. 14th Quadrennial Congress of the International-Association-of-Plant-Biotechnology (IAPB), Dublin, IRELAND, August 19, 2018 - August 24, 2018. (2018)
189.
Meeting Abstract
Gal, A.; Mahamid, J.; Faivre, D.; Scheffel, A.: Elucidating the intracellular chemical environment that regulates biological calcite crystallization in marine plankton. In Abstracts of Papers of the American Chemical Society, 255, 21. 255th National Meeting and Exposition of the American-Chemical-Society (ACS) - Nexus of Food, Energy, and Water, New Orleans, LA, March 18, 2018 - March 22, 2018. (2018)
190.
Meeting Abstract
Treves, H.; Raanan, H.; Murik, O.; Kedem, I.; Keren, N.; Kaplan, A.: The alga that never read the literature-fastest growing photodamage tolerant alga isolated from desert crust. In In Vitro Cellular & Developmental Biology-Plant, 54 (Supplement 1), pp. S4 - S5. 14th Quadrennial Congress of the International-Association-of-Plant-Biotechnology (IAPB), Dublin, IRELAND, August 19, 2018 - August 24, 2018. (2018)

Editorial (1)

191.
Editorial
Kopka, J.; Fernie, A. R.: Editorial overview: Plant synthetic and systems biology. Current Opinion in Biotechnology 49, pp. viii - xi (2018)

Film (1)

192.
Film
Luzarowski, M.; Wojciechowska, I.; Skirycz, A.: 2 in 1: One-step Affinity Purification for the Parallel Analysis of Protein-Protein and Protein-Metabolite Complexes. (2018)
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