Journal Article (189)

101.
Journal Article
Licausi, F.; Giorgi, F. M.; Schmalzlin, E.; Usadel, B.; Perata, P.; van Dongen, J. T.; Geigenberger, P.: HRE-Type Genes Are Regulated by Growth-Related Changes in Internal Oxygen Concentrations During the Normal Development of Potato (Solanum tuberosum) Tubers. Plant & Cell Physiology 52 (11), pp. 1957 - 1972 (2011)
102.
Journal Article
Licausi, F.; Kosmacz, M.; Weits, D. A.; Giuntoli, B.; Giorgi, F. M.; Voesenek, L. A. C. J.; Perata, P.; van Dongen, J. T.: Oxygen sensing in plants is mediated by an N-end rule pathway for protein destabilization. Nature 479 (7373), pp. 419 - 422 (2011)
103.
Journal Article
Licausi, F.; Weits, D. A.; Pant, B. D.; Scheible, W.-R.; Geigenberger, P.; van Dongen, J. T.: Hypoxia responsive gene expression is mediated by various subsets of transcription factors and miRNAs that are determined by the actual oxygen availability. New Phytologist 190 (2), pp. 442 - 456 (2011)
104.
Journal Article
Lisec, J.; Romisch-Margl, L.; Nikoloski, Z.; Piepho, H. P.; Giavalisco, P.; Selbig, J.; Gierl, A.; Willmitzer, L.: Corn hybrids display lower metabolite variability and complex metabolite inheritance patterns. The Plant Journal 68 (2), pp. 326 - 336 (2011)
105.
Journal Article
Lisso, J.; Schroeder, F.; Fisahn, J.; Muessig, C.: NFX1-LIKE2 (NFXL2) Suppresses Abscisic Acid Accumulation and Stomatal Closure in Arabidopsis thaliana. PLoS One 6 (11), p. e26982 (2011)
106.
Journal Article
Li, W.; Ruf, S.; Bock, R.: Chloramphenicol acetyltransferase as selectable marker for plastid transformation. Plant Molecular Biology 76 (3-5), pp. 443 - 451 (2011)
107.
Journal Article
Llorente, B.; Alonso, G. D.; Bravo-Almonacid, F.; Rodriguez, V.; Lopez, M. G.; Carrari, F.; Torres, H. N.; Flawia, M. M.: Safety assessment of nonbrowning potatoes: opening the discussion about the relevance of substantial equivalence on next generation biotech crops. Plant Biotechnology Journal 9 (2), pp. 136 - 150 (2011)
108.
Journal Article
Lombardo, V. A.; Osorio, S.; Borsani, J.; Lauxmann, M. A.; Bustamante, C. A.; Budde, C. O.; Andreo, C. S.; Lara, M. V.; Fernie, A. R.; Drincovich, M. F.: Metabolic profiling during peach fruit development and ripening reveals the metabolic networks that underpin each developmental stage. Plant Physiology 157 (4), pp. 1696 - 1710 (2011)
109.
Journal Article
Lytovchenko, A.; Eickmeier, I.; Pons, C.; Osorio, S.; Szecowka, M.; Lehmberg, K.; Arrivault, S.; Tohge, T.; Pineda, B.; Anton, M. T. et al.; Hedtke, B.; Lu, Y.; Fisahn, J.; Bock, R.; Stitt, M.; Grimm, B.; Granell, A.; Fernie, A. R.: Tomato fruit photosynthesis is seemingly unimportant in primary metabolism and ripening but plays a considerable role in seed development. Plant Physiology 157 (4), pp. 1650 - 1663 (2011)
110.
Journal Article
Maitrejean, M.; Wudick, M. M.; Voelker, C.; Prinsi, B.; Mueller-Roeber, B.; Czempinski, K.; Pedrazzini, E.; Vitale, A.: Assembly and Sorting of the Tonoplast Potassium Channel AtTPK1 and Its Turnover by Internalization into the Vacuole. Plant Physiology 156 (4), pp. 1783 - 1796 (2011)
111.
Journal Article
Maliga, P.; Bock, R.: Plastid Biotechnology: Food, Fuel, and Medicine for the 21st Century. Plant Physiology 155 (4), pp. 1501 - 1510 (2011)
112.
Journal Article
Marin, I. C.; Loef, I.; Bartetzko, L.; Searle, I.; Coupland, G.; Stitt, M.; Osuna, D.: Nitrate regulates floral induction in Arabidopsis, acting independently of light, gibberellin and autonomous pathways. Planta 233 (3), pp. 539 - 552 (2011)
113.
Journal Article
Matas, A. J.; Yeats, T. H.; Buda, G. J.; Zheng, Y.; Chatterjee, S.; Tohge, T.; Ponnala, L.; Adato, A.; Aharoni, A.; Stark, R. et al.; Fernie, A. R.; Fei, Z.; Giovannoni, J. J.; Rose, J. K. C.: Tissue- and Cell-Type Specific Transcriptome Profiling of Expanding Tomato Fruit Provides Insights into Metabolic and Regulatory Specialization and Cuticle Formation. The Plant Cell 23 (11), pp. 3893 - 3910 (2011)
114.
Journal Article
McDowell, N. G.; Beerling, D. J.; Breshears, D. D.; Fisher, R. A.; Raffa, K. F.; Stitt, M.: The interdependence of mechanisms underlying climate-driven vegetation mortality. Trends in Ecology & Evolution 26 (10), pp. 523 - 532 (2011)
115.
Journal Article
McKeown, P.C.; Laouielle-Duprat, S.; Prins, P.; Wolff, P.; Schmid, M.W.; Donoghue, M.T.A.; Fort, A.; Duszynska, D.; Comte, A.; Lao, N.T. et al.; Wennblom, T.J.; Smant, G.; Köhler, C.; Grossniklaus, U.; Spillane, C.: Identification of imprinted genes subject to parent-of-origin specific expression in Arabidopsis thaliana seeds. BMC Plant Biology 11, 113 (2011)
116.
Journal Article
Meitzel, T.; Radchuk, R.; Nunes-Nesi, A.; Fernie, A. R.; Link, W.; Weschke, W.; Weber, H.: Hybrid embryos of Vicia faba develop enhanced sink strength, which is established during early development. Plant Journal 65 (4), pp. 517 - 531 (2011)
117.
Journal Article
Michaeli, S.; Fait, A.; Lagor, K.; Nunes-Nesi, A.; Grillich, N.; Yellin, A.; Bar, D.; Khan, M.; Fernie, A. R.; Turano, F. J. et al.; Fromm, H.: A mitochondrial GABA permease connects the GABA shunt and the TCA cycle, and is essential for normal carbon metabolism. The Plant Journal 67 (3), pp. 485 - 498 (2011)
118.
Journal Article
Moheimani, N. R.; Isdepsky, A.; Lisec, J.; Raes, E.; Borowitzka, M. A.: Coccolithophorid Algae Culture in Closed Photobioreactors. Biotechnology and Bioengineering 108 (9), pp. 2078 - 2087 (2011)
119.
Journal Article
Moing, A.; Aharoni, A.; Biais, B.; Rogachev, I.; Meir, S.; Brodsky, L.; Allwood, J. W.; Erban, A.; Dunn, W. B.; Kay, L. et al.; de Koning, S.; de Vos, R. C. H.; Jonker, H.; Mumm, R.; Deborde, C.; Maucourt, M.; Bernillon, S.; Gibon, Y.; Hansen, T. H.; Husted, S.; Goodacre, R.; Kopka, J.; Schjoerring, J. K.; Rolin, D.; Hall, R. D.: Extensive metabolic cross-talk in melon fruit revealed by spatial and developmental combinatorial metabolomics. New Phytologist 190 (3), pp. 683 - 696 (2011)
120.
Journal Article
Molla-Morales, A.; Sarmiento-Manus, R.; Robles, P.; Quesada, V.; Perez-Perez, J. M.; Gonzalez-Bayon, R.; Hannah, M. A.; Willmitzer, L.; Ponce, M. R.; Micol, J. L.: Analysis of ven3 and ven6 reticulate mutants reveals the importance of arginine biosynthesis in Arabidopsis leaf development. Plant Journal 65 (3), pp. 335 - 345 (2011)
121.
Journal Article
Muehlhaus, T.; Weiss, J.; Hemme, D.; Sommer, F.; Schroda, M.: Quantitative shotgun proteomics using a uniform 15N-labeled standard to monitor proteome dynamics in time course experiments reveals new insights into the heat stress response of Chlamydomonas reinhardtii. Molecular and Cellular Proteomics 10 (9), p. M110 004739 (2011)
122.
Journal Article
Mueller, B.; Pantin, F.; Genard, M.; Turc, O.; Freixes, S.; Piques, M.; Gibon, Y.: Water deficits uncouple growth from photosynthesis, increase C content, and modify the relationships between C and growth in sink organs. Journal of Experimental Botany 62 (6), pp. 1715 - 1729 (2011)
123.
Journal Article
Mutwil, M.; Klie, S.; Tohge, T.; Giorgi, F. M.; Wilkins, O.; Campbell, M. M.; Fernie, A. R.; Usadel, B.; Nikoloski, Z.; Persson, S.: PlaNet: Combined Sequence and Expression Comparisons across Plant Networks Derived from Seven Species. The Plant Cell 23 (3), pp. 895 - 910 (2011)
124.
Journal Article
Nafati, M.; Cheniclet, C.; Hernould, M.; Do, P. T.; Fernie, A. R.; Chevalier, C.; Gevaudant, F.: The specific overexpression of a cyclin-dependent kinase inhibitor in tomato fruit mesocarp cells uncouples endoreduplication and cell growth. The Plant Journal 65 (4), pp. 543 - 556 (2011)
125.
Journal Article
Nagel, A.; Lohse, M.; Bolger, A.; Bolger, A. M.; Stitt, M.; Usadel, B.: Visualizing large, high-throughput datasets based on the cognitive representation of biological pathways. Human Vision and Electronic Imaging Xvi 7865, p. 78650h (2011)
126.
Journal Article
Narsai, R.; Rocha, M.; Geigenberger, P.; Whelan, J.; van Dongen, J. T.: Comparative analysis between plant species of transcriptional and metabolic responses to hypoxia. New Phytologist 190 (2), pp. 472 - 487 (2011)
127.
Journal Article
Nikoloski, Z.; Grimbs, S.; Klie, S.; Selbig, J.: Complexity of automated gene annotation. Biosystems 104 (1), pp. 1 - 8 (2011)
128.
Journal Article
Nunes-Nesi, A.; Araujo, W. L.; Fernie, A. R.: Targeting Mitochondrial Metabolism and Machinery as a Means to Enhance Photosynthesis. Plant Physiology 155 (1), pp. 101 - 107 (2011)
129.
Journal Article
Obata, T.; Matthes, A.; Koszior, S.; Lehmann, M.; Araujo, W. L.; Bock, R.; Sweetlove, L. J.; Fernie, A. R.: Alteration of mitochondrial protein complexes in relation to metabolic regulation under short-term oxidative stress in Arabidopsis seedlings. Phytochemistry 72 (10), pp. 1081 - 1091 (2011)
130.
Journal Article
Osorio, S.; Alba, R.; Damasceno, C. M. B.; Lopez-Casado, G.; Lohse, M.; Zanor, M. I.; Tohge, T.; Usadel, B.; Rose, J. K. C.; Fei, Z. J. et al.; Giovannoni, J. J.; Fernie, A. R.: Systems Biology of Tomato Fruit Development: Combined Transcript, Protein, and Metabolite Analysis of Tomato Transcription Factor (nor, rin) and Ethylene Receptor (Nr) Mutants Reveals Novel Regulatory Interactions. Plant Physiology 157 (1), pp. 405 - 425 (2011)
131.
Journal Article
Osorio, S.; Bombarely, A.; Giavalisco, P.; Usadel, B.; Stephens, C.; Araguez, I.; Medina-Escobar, N.; Botella, M. A.; Fernie, A. R.; Valpuesta, V.: Demethylation of oligogalacturonides by FaPE1 in the fruits of the wild strawberry Fragaria vesca triggers metabolic and transcriptional changes associated with defence and development of the fruit. Journal of Experimental Botany 62 (8), pp. 2855 - 2873 (2011)
132.
Journal Article
Palmieri, F.; Pierri, C. L.; De Grassi, A.; Nunes-Nesi, A.; Fernie, A. R.: Evolution, structure and function of mitochondrial carriers: a review with new insights. The Plant Journal 66 (1), pp. 161 - 181 (2011)
133.
Journal Article
Parlitz, S.; Kunze , R.; Mueller-Roeber, B.; Balazadeh, S.: Regulation of photosynthesis and transcription factor expression by leaf shading and re-illumination in Arabidopsis thaliana leaves. Journal of Plant Physiology 168 (12), pp. 1311 - 1319 (2011)
134.
Journal Article
Pertl, H.; Rittmann, S.; Schulze, W. X.; Obermeyer, G.: Identification of lily pollen 14-3-3 isoforms and their subcellular and time-dependent expression profile. Journal of Biological Chemistry 392 (3), pp. 249 - 262 (2011)
135.
Journal Article
Petersen, K.; Bock, R.: High-level expression of a suite of thermostable cell wall-degrading enzymes from the chloroplast genome. Plant Molecular Biology 76 (3-5), pp. 311 - 321 (2011)
136.
Journal Article
Petersen, K.; Schöttler, M. A.; Karcher, D.; Thiele, W.; Bock, R.: Elimination of a group II intron from a plastid gene causes a mutant phenotype. Nucleic Acids Research 39 (12), pp. 5181 - 5192 (2011)
137.
Journal Article
Ponnu, J.; Wahl, V.; Schmid, M.: Trehalose-6-phosphate: connecting plant metabolism and development. Frontiers in Plant Science 2, 70 (2011)
138.
Journal Article
Popova, A. V.; Hincha, D.: Thermotropic phase behavior and headgroup interactions of the nonbilayer lipids phosphatidylethanolamine and monogalactosyldiacylglycerol in the dry state. BMC Biophysics 4, p. 11 (2011)
139.
Journal Article
Popova, A. V.; Hundertmark, M.; Seckler, R.; Hincha, D. K.: Structural transitions in the intrinsically disordered plant dehydration stress protein LEA7 upon drying are modulated by the presence of membranes. Biochimica Et Biophysica Acta-Biomembranes 1808 (7), pp. 1879 - 1887 (2011)
140.
Journal Article
Quadrana, L.; Rodriguez, M. C.; Lopez, M.; Bermudez, L.; Nunes-Nesi, A.; Fernie, A. R.; Descalzo, A.; Asis, R.; Rossi, M.; Asurmendi, S. et al.; Carrari, F.: Coupling Virus-Induced Gene Silencing to Exogenous Green Fluorescence Protein Expression Provides a Highly Efficient System for Functional Genomics in Arabidopsis and across All Stages of Tomato Fruit Development. Plant Physiology 156 (3), pp. 1278 - 1291 (2011)
141.
Journal Article
Ramirez-Aguilar, S. J.; Keuthe, M.; Rocha, M.; Fedyaev, V. V.; Kramp, K.; Gupta, K. J.; Rasmusson, A. G.; Schulze, W. X.; van Dongen, J. T.: The Composition of Plant Mitochondrial Supercomplexes Changes with Oxygen Availability. Journal of Biological Chemistry 286 (50), pp. 43045 - 43053 (2011)
142.
Journal Article
Rashke, M.; Boycheva, S.; Crèvecoeur, M.; Nunes-Nesi, A.; Witt, S.; Fernie, A. R.; Amrhein, N.; Fitzpatrick, T. B.: Enhanced levels of vitamin B6 increase aerial organ size and positively affect stress tolerance in Arabidopsis. The Plant Journal 66 (3), pp. 414 - 432 (2011)
143.
Journal Article
Rautengarten, C.; Ebert, B.; Herter, T.; Petzold, C. J.; Ishii, T.; Mukhopadhyay, A.; Usadel, B.; Scheller, H. V.: The Interconversion of UDP-Arabinopyranose and UDP-Arabinofuranose Is Indispensable for Plant Development in Arabidopsis. Plant Cell 23 (4), pp. 1373 - 1390 (2011)
144.
Journal Article
Rauwolf, U.; Greiner, S.; Mracek, J.; Rauwolf, M.; Golczyk, H.; Mohler, V.; Herrmann, R. G.; Meurer, J.: Uncoupling of sexual reproduction from homologous recombination in homozygous Oenothera species. Heredity 107 (1), pp. 87 - 94 (2011)
145.
Journal Article
Reiland, S.; Grossmann, J.; Baerenfaller, K.; Gehrig, P.; Nunes-Nesi, A.; Fernie, A. R.; Gruissem, W.; Baginsky, S.: Integrated proteome and metabolite analysis of the de-etiolation process in plastids from rice (Oryza sativa L.). Proteomics 11 (9), pp. 1751 - 1763 (2011)
146.
Journal Article
Riegler, H.; Geserick, C.; Zrenner, R.: Arabidopsis thaliana nucleosidase mutants provide new insights into nucleoside degradation. New Phytologist 191 (2), pp. 349 - 359 (2011)
147.
Journal Article
Rohrmann, J.; Tohge, T.; Alba, R.; Osorio, S.; Caldana, C.; McQuinn, R.; Arvidsson, S.; van der Merwe, M. J.; Riano-Pachon, D. M.; Mueller-Roeber, B. et al.; Fei, Z.; Nunes-Nesi, A.; Giovannoni, J. J.; Fernie, A. R.: Combined transcription factor profiling, microarray analysis and metabolite profiling reveals the transcriptional control of metabolic shifts occurring during tomato fruit development. The Plant Journal 68 (6), pp. 999 - 1013 (2011)
148.
Journal Article
Roszak, P.; Köhler, C.: Polycomb group proteins are required to couple seed coat initiation to fertilization. Proceedings of the National Academy of Sciences of the United States of America 108 (51), pp. 20826 - 20831 (2011)
149.
Journal Article
Rott, M.; Martins, N. F.; Thiele, W.; Lein, W.; Bock, R.; Kraemer, D. M.; Schöttler, M. A.: ATP Synthase Repression in Tobacco Restricts Photosynthetic Electron Transport, CO2 Assimilation, and Plant Growth by Overacidification of the Thylakoid Lumen. The Plant Cell 23 (1), pp. 304 - 321 (2011)
150.
Journal Article
Rudovich, N. N.; Nikiforova, V. J.; Otto, B.; Pivovarova, O.; Gogebakan, O.; Erban, A.; Mohlig, M.; Weickert, M. O.; Spranger, J.; Tschop, M. H. et al.; Willmitzer, L.; Nauck, M.; Pfeiffer, A. F. H.: Metabolomic linkage reveals functional interaction between glucose-dependent insulinotropic polypeptide and ghrelin in humans. American Journal of Physiology-Endocrinology and Metabolism 301 (4), pp. E608 - E617 (2011)
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