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101.
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Pertl, H.; Schulze, W. X.; Obermeyer, G.: The Pollen Organelle Membrane Proteome Reveals Highly Spatial-Temporal Dynamics during Germination and Tube Growth of Lily Pollen. Journal of Proteome Research 8 (11), pp. 5142 - 5152 (2009)
102.
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Piques, M.; Schulze, W. X.; Hoehne, M.; Usadel, B.; Gibon, Y.; Rohwer, J.; Stitt, M.: Ribosome and transcript copy numbers, polysome occupancy and enzyme dynamics in Arabidopsis. Molecular Systems Biology 5, p. 314 (2009)
103.
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Pivovarova, O.; Nikiforova, V. J.; Pfeiffer, A. F. H.; Rudovich, N.: The influence of genetic variations in HHEX gene on insulin metabolism in the German MESYBEPO cohort. Diabetes-Metabolism Research and Reviews 25 (2), pp. 156 - 162 (2009)
104.
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Rasmusson, A. G.; Fernie, A. R.; van Dongen, J. T.: Alternative oxidase: a defence against metabolic fluctuations? Physiologia Plantarum 137 (4), pp. 371 - 382 (2009)
105.
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Riano-Pachon, D. M.; Nagel, A.; Neigenfind, J.; Wagner, R.; Basekow, R.; Weber, E.; Mueller-Roeber, B.; Diehl, S.; Kersten, B.: GabiPD: the GABI primary database-a plant integrative 'omics' database. Nucleic Acids Research 37 (Database issue), pp. 954 - 959 (2009)
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Rotter, A.; Camps, C.; Lohse, M.; Kappel, C.; Pilati, S.; Hren, M.; Stitt, M.; Coutos-Thevenot, P.; Moser, C.; Usadel, B. et al.; Delrot, S.; Gruden, K.: Gene expression profiling in susceptible interaction of grapevine with its fungal pathogen Eutypa lata: Extending MapMan ontology for grapevine. BMC Plant Biology 9, p. 104 (2009)
107.
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Rubin, G.; Tohge, T.; Matsuda, F.; Saito, K.; Scheible, W.-R.: Members of the LBD Family of Transcription Factors Repress Anthocyanin Synthesis and Affect Additional Nitrogen Responses in Arabidopsis. Plant Cell 21 (11), pp. 3567 - 3584 (2009)
108.
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Rupprecht, J.: From systems biology to fuel-Chlamydomonas reinhardtii as a model for a systems biology approach to improve biohydrogen production. Journal of Biotechnology 142 (1), pp. 10 - 20 (2009)
109.
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Scherling, C.; Ulrich, K.; Ewald, D.; Weckwerth, W.: A Metabolic Signature of the Beneficial Interaction of the Endophyte Paenibacillus sp Isolate and In Vitro-Grown Poplar Plants Revealed by Metabolomics. Molecular Plant-Microbe Interactions 22 (8), pp. 1032 - 1037 (2009)
110.
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Schroda, M.; Muehlhaus, T.: A 'foldosome' in the chloroplast? Plant Signaling & Behavior 4 (4), pp. 301 - 303 (2009)
111.
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Schroeder, C.; Bleidorn, C.; Hartmann, S.; Tiedemann, R.: Occurrence of Can-SINEs and intron sequence evolution supports robust phylogeny of pinniped carnivores and their terrestrial relatives. Gene 448 (2), pp. 221 - 226 (2009)
112.
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Schroeder, F.; Lisso, J.; Lange, P.; Muessig, C.: The extracellular EXO protein mediates cell expansion in Arabidopsis leaves. BMC Plant Biology 9, p. 20 (2009)
113.
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Skupin, A.; Falcke, M.: From puffs to global Ca2+ signals: How molecular properties shape global signals. Chaos 19 (3), p. 037111 (2009)
114.
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Stegemann, S.; Bock, R.: Exchange of Genetic Material Between Cells in Plant Tissue Grafts. Science 324 (5927), pp. 649 - 651 (2009)
115.
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Strodtkotter, I.; Padmasree, K.; Dinakar, C.; Speth, B.; Niazi, P. S.; Wojtera, J.; Voss, I.; Do, P. T.; Nunes-Nesi, A.; Fernie, A. R. et al.; Linke, V.; Raghavendra, A. S.; Scheibe, R.: Induction of the AOX1D Isoform of Alternative Oxidase in A-thaliana T-DNA Insertion Lines Lacking Isoform AOX1A Is Insufficient to Optimize Photosynthesis when Treated with Antimycin A. Molecular Plant 2 (2), pp. 284 - 297 (2009)
116.
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Sulpice, R.; Pyl, E. T.; Ishihara, H.; Trenkamp, S.; Steinfath, M.; Witucka-Wall, H.; Gibon, Y.; Usadel, B.; Poree, F.; Piques, M. C. et al.; von Korff, M.; Steinhauser, M.-C.; Keurentjes, J. J. B.; Guenther, M.; Hoehne, M.; Selbig, J.; Fernie, A. R.; Altmann, T.; Stitt, M.: Starch as a major integrator in the regulation of plant growth. Proceedings of the National Academy of Sciences of the United States of America 106 (25), pp. 10348 - 10353 (2009)
117.
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Szarzynska, B.; Sobkowiak, L.; Pant, B. D.; Balazadeh, S.; Scheible, W.-R.; Mueller-Roeber, B.; Jarmolowski, A.; Szweykowska-Kulinska, Z.: Gene structures and processing of Arabidopsis thaliana HYL1-dependent pri-miRNAs. Nucleic Acids Research 37 (9), pp. 3083 - 3093 (2009)
118.
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Szymanski, J.; Jozefczuk, S.; Nikoloski, Z.; Selbig, J.; Nikiforova, V.; Catchpole, G.; Willmitzer, L.: Stability of Metabolic Correlations under Changing Environmental Conditions in Escherichia coli - A Systems Approach. PLoS One 4 (10), p. e7441 (2009)
119.
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Tohge, T.; Fernie, A. R.: Web-based resources for mass-spectrometry-based metabolomics: A user's guide. Phytochemistry 70 (4), pp. 450 - 456 (2009)
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Tohge, T.; Nunes-Nesi, A.; Fernie, A. R.: Finding the paths -metabolomics and approaches to metabolic flux analysis for defining metabolic pathways and their regulation. Biochemist 31, pp. 2 - 6 (2009)
121.
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Trenkamp, S.; Eckes, P.; Busch, M.; Fernie, A. R.: Temporally resolved GC-MS-based metabolic profiling of herbicide treated plants treated reveals that changes in polar primary metabolites alone can distinguish herbicides of differing mode of action. Metabolomics 5 (3), pp. 277 - 291 (2009)
122.
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Tschoep, H.; Gibon, Y.; Carillo, P.; Armengaud, P.; Szecowka, M.; Nunes-Nesi, A.; Fernie, A. R.; Koehl, K. I.; Stitt, M.: Adjustment of growth and central metabolism to a mild but sustained nitrogen-limitation in Arabidopsis. Plant, Cell and Environment 32 (3), pp. 300 - 318 (2009)
123.
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Usadel, B.; Obayashi, T.; Mutwil, M.; Giorgi, F. M.; Bassel, G. W.; Tanimoto, M.; Chow, A.; Steinhauser, D.; Persson, S.; Provart, N. J.: Co-expression tools for plant biology: opportunities for hypothesis generation and caveats. Plant Cell and Environment 32 (12), pp. 1633 - 1651 (2009)
124.
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Usadel, B.; Poree, F.; Nagel, A.; Lohse, M.; Czedik-Eysenberg, A.; Stitt, M.: A guide to using MapMan to visualize and compare Omics data in plants: a case study in the crop species, Maize. Plant Cell and Environment 32 (9), pp. 1211 - 1229 (2009)
125.
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Valkov, V. T.; Scotti, N.; Kahlau, S.; MacLean, D.; Grillo, S.; Gray, J. C.; Bock, R.; Cardi, T.: Genome-Wide Analysis of Plastid Gene Expression in Potato Leaf Chloroplasts and Tuber Amyloplasts: Transcriptional and Posttranscriptional Control. Plant Physiology 150 (4), pp. 2030 - 2044 (2009)
126.
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van der Ent, S.; van Hulten, M.; Pozo, M. J.; Czechowski, T.; Udvardi, M. K.; Pieterse, C. M. J.; Ton, J.: Priming of plant innate immunity by rhizobacteria and beta-aminobutyric acid: differences and similarities in regulation. New Phytologist 183 (2), pp. 419 - 431 (2009)
127.
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van der Merwe, M. J.; Osorio, S.; Moritz, T.; Nunes-Nesi, A.; Fernie, A. R.: Decreased Mitochondrial Activities of Malate Dehydrogenase and Fumarase in Tomato Lead to Altered Root Growth and Architecture via Diverse Mechanisms. Plant Physiology 149 (2), pp. 653 - 669 (2009)
128.
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van Dongen, J. T.; Frohlich, A.; Ramirez-Aguilar, S. J.; Schauer, N.; Fernie, A. R.; Erban, A.; Kopka, J.; Clark, J.; Langer, A.; Geigenberger, P.: Transcript and metabolite profiling of the adaptive response to mild decreases in oxygen concentration in the roots of arabidopsis plants. Annals of Botany 103 (2), pp. 269 - 280 (2009)
129.
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Voll, L. M.; Hajirezaei, M.-R.; Czogalla-Peter, C.; Lein, W.; Stitt, M.; Sonnewald, U.; Bornke, F.: Antisense inhibition of enolase strongly limits the metabolism of aromatic amino acids, but has only minor effects on respiration in leaves of transgenic tobacco plants. New Phytologist 184 (3), pp. 607 - 618 (2009)
130.
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Wang, H.; Schauer, N.; Usadel, B.; Frasse, P.; Zouine, M.; Hernould, M.; Latche, A.; Pech, J. C.; Fernie, A. R.; Bouzayen, M.: Regulatory Features Underlying Pollination-Dependent and -Independent Tomato Fruit Set Revealed by Transcript and Primary Metabolite Profiling. The Plant Cell 21 (5), pp. 1428 - 1452 (2009)
131.
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Weigelt, K.; Kuester, H.; Rutten, T.; Fait, A.; Fernie, A. R.; Miersch, O.; Wasternack, C.; Emery, R. J. N.; Desel, C.; Hosein, F. et al.; Mueller, M.; Saalbach, I.; Weber, H.: ADP-Glucose Pyrophosphorylase-Deficient Pea Embryos Reveal Specific Transcriptional and Metabolic Changes of Carbon-Nitrogen Metabolism and Stress Responses. Plant Physiology 149 (1), pp. 395 - 411 (2009)
132.
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Wirth, J.; Poletti, S.; Aeschlimann, B.; Yakandawala, N.; Drosse, B.; Osorio, S.; Tohge, T.; Fernie, A. R.; Gunther, D.; Gruissem, W. et al.; Sautter, C.: Rice endosperm iron biofortification by targeted and synergistic action of nicotianamine synthase and ferritin. Plant Biotechnology Journal 7 (7), pp. 631 - 644 (2009)
133.
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Yazdanbakhsh, N.; Fisahn, J.: High throughput phenotyping of root growth dynamics, lateral root formation, root architecture and root hair development enabled by PlaRoM. Functional Plant Biology 36 (10-11), pp. 938 - 946 (2009)
134.
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Zabalza, A.; van Dongen, J. T.; Froehlich, A.; Oliver, S. N.; Faix, B.; Gupta, K. J.; Schmalzlin, E.; Igal, M.; Orcaray, L.; Royuela, M. et al.; Geigenberger, P.: Regulation of Respiration and Fermentation to Control the Plant Internal Oxygen Concentration. Plant Physiology 149 (2), pp. 1087 - 1098 (2009)
135.
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Zanor, M. I.; Osorio, S.; Nunes-Nesi, A.; Carrari, F.; Lohse, M.; Usadel, B.; Kuehn, C.; Bleiss, W.; Giavalisco, P.; Willmitzer, L. et al.; Sulpice, R.; Zhou, Y. H.; Fernie, A. R.: RNA Interference of LIN5 in Tomato Confirms Its Role in Controlling Brix Content, Uncovers the Influence of Sugars on the Levels of Fruit Hormones, and Demonstrates the Importance of Sucrose Cleavage for Normal Fruit Development and Fertility. Plant Physiology 150 (3), pp. 1204 - 1218 (2009)
136.
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Zanor, M. I.; Rambla, J. L.; Chaib, J.; Steppa, A.; Medina, A.; Granell, A.; Fernie, A. R.; Causse, M.: Metabolic characterization of loci affecting sensory attributes in tomato allows an assessment of the influence of the levels of primary metabolites and volatile organic contents. Journal of Experimental Botany 60 (7), pp. 2139 - 2154 (2009)
137.
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Zhang, S.; Sun, L.; Kragler, F.: The phloem-delivered RNA pool contains small noncoding RNAs and interferes with translation. Plant Physiology 150 (1), pp. 378 - 387 (2009)
138.
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Zrenner, R.; Riegler, H.; Marquard, C. R.; Lange, P. R.; Geserick, C.; Bartosz, C. E.; Chen, C. T.; Slocum, R. D.: A functional analysis of the pyrimidine catabolic pathway in Arabidopsis. New Phytologist 183 (1), pp. 117 - 132 (2009)
139.
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Zuther, E.; Hincha, D. K.: Vom Nutzen der Vielfalt – Untersuchung komplexer pflanzlicher Eigenschaften mit Hilfe natürlicher genetischer Diversität. GenomXpress 3 (9), pp. 9 - 10 (2009)

Book (2)

140.
Book
Hartmann, S.; Selbig, J.: Introductory Bioinformatics. Books on Demand, Norderstedt, GER (2009), 260 pp.
141.
Book
Scheible, W.-R.: Regulation der pflanzlichen Phosphat-Homöostase. Max-Planck-Gesellschaft zur Förderung der Wissenschaft e.V., München, GER (2009)

Book Chapter (7)

142.
Book Chapter
Bromke, M. A.; Hoefgen, R.; Hesse, H.: Amino acids in Thalassiosira pseudonana. In: Sulfur Metabolism in Higher Plants (Regulatory Aspects Significance of Sulfur in the Food Chain, Agriculture and the Environment), pp. 289 - 292 (Eds. Sirko, A.; de Kok, L. J.; Hanneklaus, S.; Hawkesford, M. J.; Rennenberg, H. et al.). Backhuys Publishers, Leiden, NED (2009)
143.
Book Chapter
Hesse, H.; Kosmehl, T.; Hoefgen, R.: Regulatory impacts of an AP2 transcription factor on plant metabolism. In: Sulfur Metabolism in Higher Plants (Regulatory Aspects Significance of Sulfur in the Food Chain, Agriculture and the Environment), pp. 157 - 160 (Eds. Sirko, A.; de Kok, L. J.; Hanneklaus, S.; Hawkesford, M. J.; Rennenberg, H. et al.). Backhuys Publishers, Leiden, NED (2009)
144.
Book Chapter
Hubberten, H.-M.; Hesse, H.; Hoefgen, R.: Lateral root growth in sulphur enriched patches. In: Sulfur Metabolism in Higher Plants (Regulatory Aspects Significance of Sulfur in the Food Chain, Agriculture and the Environment), pp. 105 - 108 (Eds. Sirko, A.; de Kok, L. J.; Hanneklaus, S.; Hawkesford, M. J.; Rennenberg, H. et al.). Backhuys Publishers, Leiden, NED (2009)
145.
Book Chapter
Kempa, S.; Walther, D.; Ebenhoeh, O.; Weckwerth, W.: Metabolic Engineering. In: Molecular Biology and Biotechnology, pp. 194 - 217 (Eds. Walker, J.; Rapley, R.). Royal Society of Chemistry (2009)
146.
Book Chapter
Kersten, B.; Feilner, T.: Protein microarrays for phosphorylation studies. In: The Protein Protocols Handbook, Vol. 162, pp. 1567 - 1578 (Ed. Walker, J. M.). Humana Press Inc., Totowa, NJ, USA (2009)
147.
Book Chapter
Schroda, M.; Vallon, O.: Chaperones and Proteases. In: The Chlamydomonas Sourcebook, Second Edition, Vol. 2, 19, pp. 671 - 730 (Ed. Stern, D. B.). Elsevier, Oxford, UK (2009)
148.
Book Chapter
Schulze, W. X.; Kierszniowska, S.: „Lipid Rafts“ – Spezielle Bereiche der Plasmamembran. In: Jahrbuch der Max-Planck Gesellschaft (Ed. Plehn, G.). Max-Planck-Gesellschaft zur Förderung der Wissenschaft e.V., München, GER (2009)

Proceedings (1)

149.
Proceedings
Metabolic, Transcriptional and Proteomic Profiling of Cold Response in Fragaria vesca. 6th International Strawberry Symposium, Huelva, SPAIN, 2009-08. (2009)

Conference Paper (4)

150.
Conference Paper
Bock, R.: Transgenic plastids as expression factories in biotechnology. NEW BIOTECHNOLOGY 25, p. S282 - S282 (2009)
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