Journal Article (162)

101.
Journal Article
McCabe, M. S.; Klaas, M.; Gonzalez-Rabade, N.; Poage, M.; Badillo-Corona, J. A.; Zhou, F.; Karcher, D.; Bock, R.; Gray, J. C.; Dix, P. J.: Plastid transformation of high-biomass tobacco variety Maryland Mammoth for production of human immunodeficiency virus type 1 (HIV-1) p24 antigen. Plant Biotechnology Journal 6 (9), pp. 914 - 929 (2008)
102.
Journal Article
McKhann, H. I.; Gery, C.; Berard, A.; Leveque, S.; Zuther, E.; Hincha, D. K.; De Mita, S.; Brunel, D.; Teoule, E.: Natural variation in CBF gene sequence, gene expression and freezing tolerance in the Versailles core collection of Arabidopsis thaliana. BMC Plant Biology 8, p. 105 (2008)
103.
Journal Article
Melotto-Passarin, D. M.; Berger, I. J.; Dressano, K.; De Martin, V. D.; Oliveira, G. C. X.; Bock, R.; Carrer, H.: Phylogenetic relationships in Solanaceae and related species based on cpDNA sequence from plastid trnE-trnT region. Crop Breeding and Applied Biotechnology 8 (1), pp. 85 - 95 (2008)
104.
Journal Article
Mendoza-Cozatl, D. G.; Butko, E.; Springer, F.; Torpey, J. W.; Komives, E. A.; Kehr, J.; Schroeder, J. I.: Identification of high levels of phytochelatins, glutathione and cadmium in the phloem sap of Brassica napus. A role for thiol-peptides in the long-distance transport of cadmium and the effect of cadmium on iron translocation. Plant Journal 54 (2), pp. 249 - 259 (2008)
105.
Journal Article
Michelet, L.; Zaffagnini, M.; Vanacker, H.; Le Marechal, P.; Marchand, C.; Schroda, M.; Lemaire, S. D.; Decottignies, P.: In vivo targets of S-thiolation in Chlamydomonas reinhardtii. Journal of Biological Chemistry 283 (31), pp. 21571 - 21578 (2008)
106.
Journal Article
Morgan, M. J.; Lehmann, M.; Schwarzlander, M.; Baxter, C. J.; Sienkiewicz-Porzucek, A.; Williams, T. C. R.; Schauer, N.; Fernie, A. R.; Fricker, M. D.; Ratcliffe, R. G. et al.; Sweetlove, L. J.; Finkemeier, I.: Decrease in manganese superoxide dismutase leads to reduced root growth and affects tricarboxylic acid cycle flux and mitochondrial redox homeostasis. Plant Physiology 147 (1), pp. 101 - 114 (2008)
107.
Journal Article
Mutwil, M.; Debolt, S.; Persson, S.: Cellulose synthesis: a complex complex. Current Opinion in Plant Biology 11 (3), pp. 252 - 257 (2008)
108.
Journal Article
Mutwil, M.; Obro, J.; Willats, W. G. T.; Persson, S.: GeneCAT - novel webtools that combine BLAST and co-expression analyses. Nucleic Acids Research 36 (Web Server issue), pp. W320 - W326 (2008)
109.
Journal Article
Neigenfind, J.; Gyetvai, G.; Basekow, R.; Diehl, S.; Achenbach, U.; Gebhardt, C.; Selbig, J.; Kersten, B.: Haplotype inference from unphased SNP data in heterozygous polyploids based on SAT. BMC Genomics 9, p. 356 (2008)
110.
Journal Article
Neupert, J.; Karcher, D.; Bock, R.: Design of simple synthetic RNA thermometers for temperature-controlled gene expression in Escherichia coli. Nucleic Acids Research 36 (19), p. e124 (2008)
111.
Journal Article
Nikoloski, Z.; Grimbs, S.; May, P.; Selbig, J.: Metabolic networks are NP-hard to reconstruct. Journal of Theoretical Biology 254 (4), pp. 807 - 816 (2008)
112.
Journal Article
Nikoloski, Z.; Grimbs, S.; Selbig, J.; Ebenhoeh, O.: Hardness and Approximability of the Inverse Scope Problem. Algorithms in Bioinformatics, Wabi 2008 5251, pp. 99 - 112 (2008)
113.
Journal Article
Nunes-Nesi, A.; Sulpice, R.; Gibon, Y.; Fernie, A. R.: The enigmatic contribution of mitochondrial function in photosynthesis. Journal of Experimental Botany 59 (7), pp. 1675 - 1684 (2008)
114.
Journal Article
Oliver, S. N.; Lunn, J. E.; Urbanczyk-Wochniak, E.; Lytovchenko, A.; van Dongen, J. T.; Faix, B.; Schmalzlin, E.; Fernie, A. R.; Geigenberger, P.: Decreased Expression of Cytosolic Pyruvate Kinase in Potato Tubers Leads to a Decline in Pyruvate Resulting in an in Vivo Repression of the Alternative Oxidase. Plant Physiology 148 (3), pp. 1640 - 1654 (2008)
115.
Journal Article
Oliver, S. N.; Tiessen, A.; Fernie, A. R.; Geigenberger, P.: Decreased expression of plastidial adenylate kinase in potato tubers results in an enhanced rate of respiration and a stimulation of starch synthesis that is attributable to post-translational redox-activation of ADP-glucose pyrophosphorylase. Journal of Experimental Botany 59 (2), pp. 315 - 325 (2008)
116.
Journal Article
Palmieri, L.; Santoro, A.; Carrari, F.; Blanco, E.; Nunes-Nesi, A.; Arrigoni, R.; Genchi, F.; Fernie, A. R.; Palmieri, F.: Identification and Characterization of ADNT1, a Novel Mitochondrial Adenine Nucleotide Transporter from Arabidopsis. Plant Physiology 148 (4), pp. 1797 - 1808 (2008)
117.
Journal Article
Pant, B. D.; Buhtz, A.; Kehr, J.; Scheible, W.-R.: MicroRNA399 is a long-distance signal for the regulation of plant phosphate homeostasis. Plant Journal 53 (5), pp. 731 - 738 (2008)
118.
Journal Article
Paredez, A. R.; Persson, S.; Ehrhardt, D. W.; Somerville, C. R.: Genetic evidence that cellulose synthase activity influences microtubule cortical array organization. Plant Physiology 147 (4), pp. 1723 - 1734 (2008)
119.
Journal Article
Rautengarten, C.; Usadel, B.; Neumetzler, L.; Hartmann, J.; Buessis, D.; Altmann, T.: A subtilisin-like serine protease essential for mucilage release from Arabidopsis seed coats. Plant Journal 54 (3), pp. 466 - 480 (2008)
120.
Journal Article
Rauwolf, U.; Golczyk, H.; Meurer, J.; Herrmann, R. G.; Greiner, S.: Molecular marker systems for Oenothera genetics. Genetics 180 (3), pp. 1289 - 1306 (2008)
121.
Journal Article
Riano-Pachon, D. M.; Correa, L. G. G.; Trejos-Espinosa, R.; Mueller-Roeber, B.: Green transcription factors: A Chlamydomonas overview. Genetics 179 (1), pp. 31 - 39 (2008)
122.
Journal Article
Riewe, D.; Grosman, L.; Fernie, A. R.; Wucke, C.; Geigenberger, P.: The potato-specific apyrase is apoplastically localized and has influence on gene expression, growth, and development. Plant Physiology 147 (3), pp. 1092 - 1109 (2008)
123.
Journal Article
Riewe, D.; Grosman, L.; Fernie, A. R.; Zauber, H.; Wucke, C.; Geigenberger, P.: A Cell Wall-Bound Adenosine Nucleosidase is Involved in the Salvage of Extracellular ATP in Solanum tuberosum. Plant and Cell Physiology 49 (10), pp. 1572 - 1579 (2008)
124.
Journal Article
Riewe, D.; Grosman, L.; Zauber, H.; Wucke, C.; Fernie, A. R.; Geigenberger, P.: Metabolic and developmental adaptations of growing potato tubers in response to specific manipulations of the adenylate energy status. Plant Physiology 146 (4), pp. 1579 - 1598 (2008)
125.
Journal Article
Rinder, J.; Casazza, A. P.; Hoefgen, R.; Hesse, H.: Regulation of aspartate-derived amino acid homeostasis in potato plants (Solanum tuberosum L.) by expression of E-coli homoserine kinase. Amino Acids 34 (2), pp. 213 - 222 (2008)
126.
Journal Article
Rogalski, M.; Karcher, D.; Bock, R.: Superwobbling facilitates translation with reduced tRNA sets. Nature structural and molecular biology 15 (2), pp. 192 - 198 (2008)
127.
Journal Article
Rogalski, M.; Schöttler, M. A.; Thiele, W.; Schulze, W. X.; Bock, R.: Rpl33, a nonessential plastid-encoded ribosomal protein in tobacco, is required under cold stress conditions. The Plant Cell 20 (8), pp. 2221 - 2237 (2008)
128.
Journal Article
Rogato, A.; D'Apuzzo, E.; Barbulova, A.; Omrane, S.; Stedel, C.; Simon-Rosin, U.; Katinakis, P.; Flemetakis, M.; Udvardi, M. K.; Chiurazzi, M.: Tissue-specific down-regulation of LjAMT1;1 compromises nodule function and enhances nodulation in Lotus japonicus. Plant Molecular Biology 68 (6), pp. 585 - 595 (2008)
129.
Journal Article
Ruffel, S.; Freixes, S.; Balzergue, S.; Tillard, P.; Jeudy, C.; Martin-Magniette, M. L.; van der Merwe, M. J.; Kakar, K.; Gouzy, J.; Fernie, A. R. et al.; Udvardi, M. K.; Salon, C.; Gojon, A.; Lepetit, M.: Systemic signaling of the plant nitrogen status triggers specific transcriptome responses depending on the nitrogen source in Medicago truncatula. Plant Physiology 146 (4), pp. 2020 - 2035 (2008)
130.
Journal Article
Rumpler, M.; Woesz, A.; Dunlop, J. W. C.; van Dongen, J. T.; Fratzl, P.: The effect of geometry on three-dimensional tissue growth. Journal of the Royal Society Interface 5 (27), pp. 1173 - 1180 (2008)
131.
Journal Article
Sanchez, D. H.; Lippold, F.; Redestig, H.; Hannah, M. A.; Erban, A.; Kraemer, U.; Kopka, J.; Udvardi, M. K.: Integrative functional genomics of salt acclimatization in the model legume Lotus japonicus. Plant Journal 53 (6), pp. 973 - 987 (2008)
132.
Journal Article
Sanchez, D. H.; Redestig, H.; Kraemer, U.; Udvardi, M. K.; Kopka, J.: Metabolome-ionome-biomass interactions: What can we learn about salt stress by multiparallel phenotyping? Plant Signaling & Behavior 3 (8), pp. 598 - 600 (2008)
133.
Journal Article
Sanchez, D. H.; Siahpoosh, M. R.; Roessner, U.; Udvardi, M. K.; Kopka, J.: Plant metabolomics reveals conserved and divergent metabolic responses to salinity. Physiologia Plantarum 132 (2), pp. 209 - 219 (2008)
134.
Journal Article
Scarpeci, T. E.; Zanor, M. I.; Carrillo, N.; Mueller-Roeber, B.; Valle, E. M.: Generation of superoxide anion in chloroplasts of Arabidopsis thaliana during active photosynthesis: a focus on rapidly induced genes. Plant Molecular Biology 66 (4), pp. 361 - 378 (2008)
135.
Journal Article
Schauer, N.; Semel, Y.; Balbo, I.; Steinfath, M.; Repsilber, D.; Selbig, J.; Pleban, T.; Zamir, D.; Fernie, A. R.: Mode of inheritance of primary metabolic traits in tomato. The Plant Cell 20 (3), pp. 509 - 523 (2008)
136.
Journal Article
Scheffel, A.; Gaerdes, A.; Gruenberg, K.; Wanner, G.; Schueler, D.: The major magnetosome proteins MamGFDC are not essential for magnetite biomineralization in Magnetospirillum gryphiswaldense but regulate the size of magnetosome crystals. Journal of Bacteriology 190 (1), pp. 377 - 386 (2008)
137.
Journal Article
Schippers, J. H. M.; Nunes-Nesi, A.; Apetrei, R.; Hille, J.; Fernie, A. R.; Dijkwel, P. P.: The Arabidopsis onset of leaf death5 Mutation of Quinolinate Synthase Affects Nicotinamide Adenine Dinucleotide Biosynthesis and Causes Early Ageing. The Plant Cell 20 (10), pp. 2909 - 2925 (2008)
138.
Journal Article
Schweighofer, A.; Meskiene, I.: Regulation of stress hormones jasmonates and ethylene by MAPK pathways in plants. Molecular Biosystems 4 (8), pp. 799 - 803 (2008)
139.
Journal Article
Shao, N.; Beck, C. F.; Lemaire, S. D.; Krieger-Liszkay, A.: Photosynthetic electron flow affects H2O2 signaling by inactivation of catalase in Chlamydomonas reinhardtii. Planta 228 (6), pp. 1055 - 1066 (2008)
140.
Journal Article
Shao, N.; Bock, R.: A codon-optimized luciferase from Gaussia princeps facilitates the in vivo monitoring of gene expression in the model alga Chlamydomonas reinhardtii. Current Genetics 53 (6), pp. 381 - 388 (2008)
141.
Journal Article
Sienkiewicz-Porzucek, A.; Nunes-Nesi, A.; Sulpice, R.; Lisec, J.; Centeno, D. C.; Carillo, P.; Leisse, A.; Urbanczyk-Wochniak, E.; Fernie, A. R.: Mild reductions in mitochondrial citrate synthase activity result in a compromised nitrate assimilation and reduced leaf pigmentation but have no effect on photosynthetic performance or growth. Plant Physiology 147 (1), pp. 115 - 127 (2008)
142.
Journal Article
Skirycz, A.; Radziejwoski, A.; Busch, W.; Hannah, M. A.; Czeszejko, J.; Kwasniewski, M.; Zanor, M. I.; Lohmann, J. U.; De Veylder, L.; Witt, I. et al.; Mueller-Roeber, B.: The DOF transcription factor OBP1 is involved in cell cycle regulation in Arabidopsis thaliana. The Plant Journal 56 (5), pp. 779 - 792 (2008)
143.
Journal Article
Sreenivasulu, N.; Usadel, B.; Winter, A.; Radchuk, V.; Scholz, U.; Stein, N.; Weschke, W.; Strickert, M.; Close, T. J.; Stitt, M. et al.; Graner, A.; Wobus, U.: Barley grain maturation and germination: Metabolic pathway and regulatory network commonalities and differences highlighted by new MapMan/PageMan profiling tools. Plant Physiology 146 (4), pp. 1738 - 1758 (2008)
144.
Journal Article
Steinfath, M.; Groth, D.; Lisec, J.; Selbig, J.: Metabolite profile analysis: from raw data to regression and classification. Physiologia Plantarum 132 (2), pp. 150 - 161 (2008)
145.
Journal Article
Strehmel, N.; Hummel, J.; Erban, A.; Strassburg, K.; Kopka, J.: Retention index thresholds for compound matching in GC-MS metabolite profiling. Journal of Chromatography B-Analytical Technologies in the Biomedical and Life Sciences 871 (2), pp. 182 - 190 (2008)
146.
Journal Article
Sweetlove, L. J.; Fell, D.; Fernie, A. R.: Getting to grips with the plant metabolic network. Biochemical Journal 409 (1), pp. 27 - 41 (2008)
147.
Journal Article
Timm, S.; Nunes-Nesi, A.; Pamik, T.; Morgenthal, K.; Wienkoop, S.; Keerberg, O.; Weckwerth, W.; Kleczkowski, L. A.; Fernie, A. R.; Bauwe, H.: A Cytosolic Pathway for the Conversion of Hydroxypyruvate to Glycerate during Photorespiration in Arabidopsis. The Plant Cell 20 (10), pp. 2848 - 2859 (2008)
148.
Journal Article
Toerjek, O.; Meyer, R. C.; Zehnsdorf, M.; Teltow, M.; Strompen, G.; Witucka-Wall, H.; Blacha, A.; Altmann, T.: Construction and analysis of 2 reciprocal Arabidopsis introgression line populations. Journal of Heredity 99 (4), pp. 396 - 406 (2008)
149.
Journal Article
Usadel, B.; Blaesing, O. E.; Gibon, Y.; Poree, F.; Hoehne, M.; Guenter, M.; Trethewey, R.; Kamlage, B.; Poorter, H.; Stitt, M.: Multilevel genomic analysis of the response of transcripts, enzyme activities and metabolites in Arabidopsis rosettes to a progressive decrease of temperature in the non-freezing range. Plant, Cell and Environment 31 (4), pp. 518 - 547 (2008)
150.
Journal Article
Usadel, B.; Blaesing, O. E.; Gibon, Y.; Retzlaff, K.; Hoehne, M.; Guenther, M.; Stitt, M.: Global transcript levels respond to small changes of the carbon status during progressive exhaustion of carbohydrates in Arabidopsis rosettes. Plant Physiology 146 (4), pp. 1834 - 1861 (2008)
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