Walther, D.; Brunnemann, R.; Selbig, J.: The Regulatory Code for Transcriptional Response Diversity and Its Relation to Genome Structural Properties in A. thaliana. PLoS Genetics 3 (2), p. e11 (2007)

Willmund, F.; Muehlhaus, T.; Wojciechowska, M.; Schroda, M.: The NH2-terminal domain of the chloroplast GrpE homolog CGE1 is required for dimerization and cochaperone function in vivo. Journal of Biological Chemistry 282 (15), pp. 11317 - 11328 (2007)

Winter, N.; Kollwig, G.; Zhang, S.; Kragler, F.: MPB2C, a microtubule-associated protein, regulates non-cell-autonomy of the homeodomain protein KNOTTED1. Plant Cell 19 (10), pp. 3001 - 3018 (2007)

Wurbs, D.; Ruf, S.; Bock, R.: Contained metabolic engineering in tomatoes by expression of carotenoid biosynthesis genes from the plastid genome. Plant Journal 49 (2), pp. 276 - 288 (2007)

Xiao, F.; Giavalisco, P.; Martin, G. B.: Pseudomonas syringae type III effector AvrPtoB is phosphorylated in plant cells on serine 258, promoting its virulence activity. Journal of Biological Chemistry 282 (42), pp. 30737 - 30744 (2007)

Zhou, F.; Karcher, D.; Bock, R.: Identification of a plastid intercistronic expression element (IEE) facilitating the expression of stable translatable monocistronic mRNAs from operons. Plant Journal 52 (5), pp. 961 - 972 (2007)

Zoschke, R.; Liere, K.; Boerner, T.: From seedling to mature plant: Arabidopsis plastidial genome copy number, RNA accumulation and transcription are differentially regulated during leaf development. The Plant Journal 50 (4), pp. 710 - 722 (2007)

Baginsky, S.; Fernie, A. R.: Plant Systems Biology. Birkhäuser Verlag, Basel, SUI (2007)

Weckwerth, W.: Metabolomics: Methods and Protocols. Humana Press Inc., Totowa, NJ, USA (2007)

Bock, R.: Structure, function, and inheritance of plastid genomes. In: Cell and Molecular Biology of Plastids, pp. 29 - 63 (Ed. Bock, R.). Springer-Verlag, Berlin, Heidelberg (2007)

Colditz, F.; Krajinski, F.; Niehaus, K.: Plant Proteomics Upon Fungal Attack. In: Plant Proteomics, 18, pp. 283 - 309 (Eds. Samaj, J.; Thelen, J. J.). Springer-Verlag, Berlin, Heidelberg (2007)

Dolch, D.; Batsaikhan, N.; Thiele, K.; Burger, F.; Scheffler, I.; Kiefer, A.; Mayer, F.; Samjaa, R.; Stubbe, A.; Stubbe, M. et al.; Krall, L.; Steinhauser, D.: Contributions to the Chiroptera of Mongolia with first evidences on species communities and ecological niches. Erforschung biologischer Ressourcen der Mongolischen Volksrepublik. In: Schriftenreihe der Martin-Luther Universität Halle, Vol. 10, pp. 407 - 458 (2007)

Erban, A.; Schauer, N.; Fernie, A. R.; Kopka, J.: Nonsupervised construction and application of mass spectral and retention time index libraries from time-of-flight gas chromatography-mass spectrometry metabolite profiles. In: Metabolomics: Methods and Protocols, pp. 19 - 38 (Ed. Weckwerth, W.). Humana Press Inc., Totowa, NJ, USA (2007)

Hennig, L.; Köhler, C.: Case studies for transcriptional profiling. In: Plant Systems Biology, Vol. 97, pp. 87 - 97 (Eds. Baginsky, S.; Fernie, A. R.) (2007)

Hoefgen, R.; Hesse, H.: Sulfur in plants as part of a metabolic network. In: Sulfur in plants. An ecological perspective (Eds. Hawkesford, M. J.; Kok, L. J. d.). Springer-Verlag, Dordrecht, NED (2007)

Hummel, J.; Selbig, J.; Walther, D.; Kopka, J.: The Golm Metabolome Database: a database for GC-MS based metabolite profiling. In: Metabolomics: A Powerful Tool in Systems Biology, pp. 75 - 95 (Eds. Nielsen, J.; Jewett, M.). Springer-Verlag, Berlin, Heidelberg, New York (2007)

Kersten, B.; Wanker, E.E.: Klinische Proteomik. In: Grundlagen der Molekularen Medizin, 3.1, p. 397 (Eds. Ganten, D.; Ruckpaul, K.). Springer-Verlag, Berlin, Heidelberg, New York (2007)

Morgenthal, K.; Wienkoop, S.; Wolschin, F.; Weckwerth, W.: Integrative profiling of metabolites and proteins: improving pattern recognition and biomarker selection for systems level approaches. In: Metabolomics: Methods and Protocols, pp. 57 - 75 (Ed. Weckwerth, W.). Humana Press Inc., Totowa, NJ, USA (2007)

Nikiforova, V. J.; Willmitzer, L.: Network visualization and network analysis. In: Plant Systems Biology, pp. 245 - 275. Birkhäuser Verlag, Basel, SUI (2007)

Redestig, H.; Sohler, F.; Zimmer, R.; Selbig, J.: Unsupervised Decision Trees Structured by Gene Ontology (GO-UDTs) for the Interpretation of Microarray Data. In: Advances in Data Analysis, pp. 585 - 592 (Eds. Decker, R.; Lenz, H. -.). Springer-Verlag, Berlin, Heidelberg (2007)

Scholz, M.; Selbig, J.: Visualisation and Analysis of Molecular Data. In: Metabolomics: Methods and Protocols, pp. 87 - 104 (Ed. Weckwerth, W.). Humana Press Inc., Totowa, NJ, USA (2007)

Steinfath, M.; Repsilber, D.; Scholz, M.; Walther, D.; Selbig, J.: Integrated data analysis for genome-wide research. In: Plant Systems Biology, pp. 309 - 329 (Eds. Baginski, S.; Fernie, A.). Birkhäuser Verlag, Basel, Boston, Berlin (2007)

Steinhauser, D.; Kopka, J.: Methods, applications and concepts of metabolite profiling: primary metabolism. In: Plant Systems Biology, pp. 171 - 194 (Eds. Baginsky, S.; Fernie, A. R.). Verlag Birkhäuser, Basel, SUI (2007)

Steuer, R.; Morgenthal, K.; Weckwerth, W.; Selbig, J.: A gentle guide to the analysis of metabolomic data. In: Metabolomics: Methods and Protocols, pp. 105 - 126 (Ed. Weckwerth, W.). Humana Press Inc., Totowa, NJ, USA (2007)

Urbanczyk-Wochniak, E.; Willmitzer, L.; Fernie, A. R.: Integrating profiling data: using linear correlation to reveal coregulation of transcript and metabolites. In: Metabolomics: Methods and Protocols, pp. 77 - 85 (Ed. Weckwerth, W.). Humana Press Inc., Totowa, NJ, USA (2007)

Zuther, E.; Koehl, K. I.; Kopka, J.: Comparative metabolome analysis of the salt response in breeding cultivars of rice. In: Advances in molecular breeding toward drought and salt tolerant crops., pp. 285 - 315 (Eds. Jenks, M. A.; Hasegawa, P. M.; Jain, S. M.). Springer-Verlag, Berlin, Heidelberg, New York (2007)

Birkemeye, C.; Kopka, J.: Design of metabolite recovery by variations of the metabolite profiling protocol. In: Concepts in Plant Metabolomics, pp. 45 - 69. 3rd International Congress on Plant Metabolomics, Ames, IA. (2007)

Urbanczyk-Wochniak, E.; Baxter, C.; Sweetlove, L. J.; Fernie, A. R.: Profiling diurnal changes in metabolite and transcript levels in potato leaves. In: 3rd International Congress on Plant Metabolomics, pp. 183 - 192. 3rd International Congress on Plant Metabolomics, Iowa State Univ, Ames, IA. (2007)

Willmitzer, L.; Caldana, C.; Fernie, A. R.; Giavalisco, P.; MA, H.; Redestig, H.; Steinhauser, D.: Integrative Analysis of Transcriptome and Metabolome Data. In: Proceedings of the German Conference on Bioinformatics, Vol. 01. Proceedings of the German Conference on Bioinformatics, GCB 2007, Potsdam, Germany, September 26, 2007 - September 28, 2007. (2007)

Bednarczyk, D.; Bock, R.; Schoettler, M.: Genetic manipulation of PSI biogenesis in higher plants. In Photosynthesis Research, 91 (2-3), p. 195 - 195. (2007)

Cuong, N. H.; Hesse, H.; Hoefgen, R.: Improvement of amino acid content in rice (O-sativa). In Amino Acids, 33 (3), p. Xxxv - Xxxv. (2007)

Fluegel, C.; Thiele, W.; Bock, R.; Schoettler, M.: Ontogenetic changes in the biogenesis of the cytochrome-b(6)f complex. In Photosynthesis Research, 91 (2-3), p. 267 - 267. (2007)

Hincha, D.; Hannah, M.; Le, M.; Heyer, A. G.: Plant freezing tolerance: From gene expression to functional adaptation. In Comparative Biochemistry and Physiology a-Molecular & Integrative Physiology, 146 (4), p. S151 - S151. (2007)

Hundertmark, M.; Hincha, D.: Genome-wide analysis of LEA (late embryogenesis abundant) genes in the model plant Arabidopsis thaliana. In Comparative Biochemistry and Physiology a-Molecular & Integrative Physiology, 146 (4), p. S262 - S262. (2007)

Korn, M.; Hincha, D.; Heyer, A. G.: Heterosis in the frost tolerance of crosses between different Arabidopsis thaliana accessions. In Comparative Biochemistry and Physiology a-Molecular & Integrative Physiology, 146 (4), p. S153 - S153. (2007)

Nunes-Nesi, A.: Upregulation of photosynthetic performance and growth as a consequence of a decreased TCA cycle enzymes activity in genetic manipulated tomato plants. In Photosynthesis Research, 91 (2-3), pp. 247 - 248. (2007)

Schoettler, M.; Fluegel, C.; Thiele, W.; Piepenburg, K.; Bock, R.: Photosystem I does not contribute to photosynthetic flux control. In Photosynthesis Research, 91 (2-3), p. 188 - 188. (2007)

Willmitzer, L.: Small molecules, genes and complex traits. In FEBS Journal, 274, p. 64 - 64. (2007)

Bock, R.: Plastid biotechnology: prospects for herbicide and insect resistance, metabolic engineering and molecular farming. Current Opinion in Biotechnology 18 (2), pp. 100 - 106 (2007)

Doermann, P.: Functional diversity of tocochromanols in plants. Planta 225 (2), pp. 269 - 276 (2007)

Fernie, A. R.: The future of metabolic phytochemistry: Larger numbers of metabolites, higher resolution, greater understanding. Phytochemistry 68 (22-24), pp. 2861 - 2880 (2007)

Hoelzl, G.; Doermann, P.: Structure and function,of glycoglycerolipids in plants and bacteria. Progress in Lipid Research 46 (5), pp. 225 - 243 (2007)

Kraemer, U.; Talke, I. N.; Hanikenne, M.: Transition metal transport. FEBS Letters 581 (12), pp. 2263 - 2272 (2007)

Krajinski, F.; Frenzel, A.: Towards the elucidation of AM-specific transcription in Medicago truncatula. Phytochemistry 68 (1), pp. 75 - 81 (2007)

Kuester, H.; Becker, A.; Firnhaber, C.; Hohnjec, N.; Manthey, K.; Perlick, A. M.; Bekel, T.; Dondrup, M.; Henckel, K.; Goesmann, A. et al.; Meyer, F.; Wipf, D.; Requena, N.; Hildebrandt, U.; Hampp, R.; Nehls, U.; Krajinski, F.; Franken, P.; Puehler, A.: Development of bioinformatic tools to support EST-sequencing, in silico- and microarray-based transcriptome profiling in mycorrhizal symbioses. Phytochemistry 68 (1), pp. 19 - 32 (2007)

Lytovchenko, A.; Sonnewald, U.; Fernie, A. R.: The complex network of non-cellulosic carbohydrate metabolism. Current Opinion in Plant Biology 10 (3), pp. 227 - 235 (2007)

Mueller-Roeber, B.; Dreyer, I.: Ion homeostasis: plants feel better with proper control. EMBO Reports 8 (8), pp. 735 - 736 (2007)

Nunes-Nesi, A.; Sweetlove, L. J.; Fernie, A. R.: Operation and function of the tricarboxylic acid cycle in the illuminated leaf. Physiologia Plantarum 129 (1), pp. 45 - 56 (2007)

Reumann, S.; Babujee, L.; Ma, C.; Wienkoop, S.; Siemsen, T.; Antonicelli, G. E.; Rasche, N.; Luder, F.; Weckwerth, W.; Jahn, O.: Proteome analysis of Arabidopsis leaf peroxisomes reveals novel targeting peptides, metabolic pathways, and defense mechanisms. Plant Cell 19 (10), pp. 3170 - 3193 (2007)

Smith, A. M.; Stitt, M.: Coordination of carbon supply and plant growth. Plant Cell and Environment 30 (9), pp. 1126 - 1149 (2007)