Max Planck Institute of Molecular Plant Physiology

Publications of the institute

Journal Article (3994)

1.

Journal Article

Brigante, F. I.; Lucini Mas, A.; Erban, A.; Fehrle, I.; Martinez-Seidel, F.; Kopka, J.; Wunderlin, D. A.; Baroni, M. V.: Authenticity assessment of commercial bakery products with chia, flax and sesame seeds: Application of targeted and untargeted metabolomics results from seeds and lab-scale cookies. Food control 140, 109114 (2022)

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2.

Journal Article

Rivas, F.J.M.; Blanco-Portales, R.; Molina-Hidalgo, F.; Caballero, J.; de Souza, L. P.; Alseekh, S.; Fernie, A. R.; Munoz-Blanco, J.; Rodriguez-Franco, A.: Azacytidine arrests ripening in cultivated strawberry (Fragaria x ananassa) by repressing key genes and altering hormone contents. BMC Plant Biology 22 (1), 278 (2022)

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3.

Journal Article

Chen, B.; Maas, L.; Figueiredo, D.D.; Zhong, Y.; Reis, R.; Li, M.; Horstman, A.; Riksen, T.; Weemen, M.; Liu, H. et al.; Siemons, C.; Chen, S.; Angenent, G. C.; Boutilier, K.: BABY BOOM regulates early embryo and endosperm development. Proceedings of the National Academy of Sciences of the United States of America 119 (25), e2201761119 (2022)

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4.

Journal Article

Ralevski, A.; Apelt, F.; Olas, J.; Mueller-Roeber, B.; Rugarli, E.; Kragler, F.; Horvath, T.: Plant mitochondrial FMT and its mammalian homolog CLUH controls development and behavior in Arabidopsis and locomotion in mice. Cellular and Molecular Life Sciences 79 (6), 334 (2022)

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5.

Journal Article

Liu, Z.; Østerlund, I.; Ruhnow, F.; Cao, Y.; Huang, G.; Cai, W.; Zhang, J.; Liang, W.; Nikoloski, Z.; Persson, S. et al.; Zhang, D.: Fluorescent cytoskeletal markers reveal associations between the actin and microtubule cytoskeleton in rice cells. Development 149 (12), dev.200415 (2022)

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6.

Journal Article

Tabatabaei, I.; Alseekh, S.; Shahid, M.; Leniak, E.; Wagner, M.; Mahmoudi, H.; Thushar, S.; Fernie, A. R.; Murphy, K. M.; Schmöckel, S. M. et al.; Tester, M.; Mueller-Roeber, B.; Skirycz, A.; Balazadeh, S.: The diversity of quinoa morphological traits and seed metabolic composition. Scientific Data 9 (1), 323 (2022)

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7.

Journal Article

Salem, M.A.; El-Shiekh, R. A.; Fernie, A. R.; Alseekh, S.; Zayed, A.: Metabolomics-based profiling for quality assessment and revealing the impact of drying of Turmeric (Curcuma longa L.). Scientific Reports 12 (1), 10288 (2022)

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8.

Journal Article

Del-Saz, N.; Iglesias-Sanchez, A.; Alonso-Forn, D.; Lopez-Gomez, M.; Palma, F.; Clemente-Moreno, M.; Fernie, A. R.; Ribas-Carbo, M.; Florez-Sarasa, I.: The Lack of Alternative Oxidase 1a Restricts in vivo Respiratory Activity and Stress-Related Metabolism for Leaf Osmoprotection and Redox Balancing Under Sudden Acute Water and Salt Stress in Arabidopsis thaliana. FRONTIERS IN PLANT SCIENCE 13, 833113 (2022)

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9.

Journal Article

Yokoyama, R.; de Oliveira, M.V.V.; Takeda-Kimura, Y.; Ishihara, H.; Alseekh, S.; Arrivault, S.; Kukshal, V.; Jez, J.M.; Stitt, M.; Fernie, A. R. et al.; Maeda, H.A.: Point mutations that boost aromatic amino acid production and CO2 assimilation in plants. Science Advances 8 (23), eabo3416 (2022)

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10.

Journal Article

Jiang, C.; Sun, J.; Li, R.; Yan, S.; Chen, W.; Guo, L.; Qin, G.; Wang, P.; Luo, C.; Huang, W. et al.; Zhang, Q.; Fernie, A. R.; Jackson, D.; Li, X.; Yan, J.: A reactive oxygen species burst causes haploid induction in maize. Molecular Plant 15 (6), pp. 943 - 955 (2022)

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11.

Journal Article

Alseekh, S.; Zhu, F.; Vallarino, J. G.; Sokolowska, E.; Yoshida, T.; Bergmann, S.; Wendenburg, R.; Bolze, A.; Skirycz, A.; Avin-Wittenberg, T. et al.; Fernie, A. R.: Autophagy modulates the metabolism and growth of tomato fruit during development. Horticulture Research, uhac129 (2022)

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12.

Journal Article

Bohra, A.; Tiwari, A.; Kaur, P.; Ganie, S. A.; Raza, A.; Roorkiwal, M.; Mir, R. R.; Fernie, A. R.; Smýkal, P.; Varshney, R. K.: The Key to the Future Lies in the Past: Insights from Grain Legume Domestication and Improvement Should Inform Future Breeding Strategies. Plant and Cell Physiology, pcac086 (2022)

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13.

Journal Article

Fischer, A.; Dotzek, J.; Walther, D.; Greiner, S.: Graph-based models of the Oenothera mitochondrial genome capture the enormous complexity of higher plant mitochondrial DNA organization. NAR: genomics and bioinformatics 4 (2), lqac027 (2022)

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14.

Journal Article

Hong, J.; Rosental, L.; Xu, Y.; Xu, D.; Orf, I.; Wang, W.; Hu, Z.; Su, S.; Bai, S.; Ashraf, M. et al.; Hu, C.; Zhang, C.; Li, Z.; Xu, J.; Liu, Q.; Zhang, H.; Zhang, F.; Luo, Z.; Chen, M.; Chen, X.; Betts, N.; Fernie, A. R.; Liang, W.; Chen, G.; Brotman, Y.; Zhang, D.; Shi, J.: Genetic architecture of seed glycerolipids in Asian cultivated rice. Plant, Cell and Environment (2022)

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15.

Journal Article

Li, P.; Ye, Z.; Fu, J.; Xu, Y.; Shen, Y.; Zhang, Y.; Tang, D.; Li, P.; Zuo, H.; Tong, W. et al.; Wang, S.; Fernie, A. R.; Zhao, J.: CsMYB184 regulates caffeine biosynthesis in tea plants. Plant Biotechnology Journal 20 (6), pp. 1012 - 1014 (2022)

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16.

Journal Article

Paschoal, D.; Costa, J. L.; da Silva, E. M.; da Silva, F. B.; Capelin, D.; Ometto, V.; Aricetti, J. A.; Carvalho, G. G.; Pimpinato, R. F.; de Oliveira, R. F. et al.; Carrera, E.; López-Díaz, I.; Rossi, M. L.; Tornisielo, V.; Caldana, C.; Riano-Pachon, D. M.; Cesarino, I.; Teixeira, P. J. P. L.; Figueira, A.: Infection by Moniliophthora perniciosa reprograms Micro-Tom physiology, establishes a sink and increases secondary cell wall synthesis. Journal of Experimental Botany 73 (11), pp. 3651 - 3670 (2022)

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17.

Journal Article

Rakpenthai, A.; Apodiakou, A.; Whitcomb, S. J.; Hoefgen, R.: In silico analysis of cis-elements and identification of transcription factors putatively involved in the regulation of the OAS cluster genes SDI1 and SDI2. The Plant Journal 110 (5), pp. 1286 - 1304 (2022)

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18.

Journal Article

Sedaghatmehr, M.; Stüwe, B.; Mueller-Roeber, B.; Balazadeh, S.: Heat shock factor HSFA2 fine-tunes resetting of thermomemory via plastidic metalloprotease FtsH6. Journal of Experimental Botany, erac257 (2022)

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19.

Journal Article

Skirycz, A.; Fernie, A. R.: Past accomplishments and future challenges of the multi-omics characterization of leaf growth. Plant Physiology 189 (2), pp. 473 - 489 (2022)

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20.

Journal Article

Sun, S.; Feng, L.; Chung, K. P.; Lee, K.-M.; Cheung, H. H.-Y.; Luo, M.; Ren, K.; Law, K. C.; Jiang, L.; Wong, K.-B. et al.; Zhuang, X.: Mechanistic insights into an atypical interaction between ATG8 and SH3P2 in Arabidopsis thaliana. Autophagy 18 (6), pp. 1350 - 1366 (2022)

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21.

Journal Article

Wang, S.; Li, Y.; He, L.; Yang, J.; Fernie, A. R.; Luo, J.: Natural variance at the interface of plant primary and specialized metabolism. Current Opinion in Plant Biology 67, 102201 (2022)

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22.

Journal Article

Wenk, S.; Claassens, N.J.; Lindner, S. N.: Synthetic metabolism approaches: A valuable resource for systems biology. Current Opinion in Systems Biology 30, 100417 (2022)

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23.

Journal Article

Zhu, F.; Jadhav, S. S.; Tohge, T.; Salem, M. A.; Li, J. M.; Giovannoni, J. J.; Cheng, Y.; Alseekh, S.; Fernie, A. R.: A comparative transcriptomics and eQTL approach identifies SlWD40 as a tomato fruit ripening regulator. Plant Physiology (2022)

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24.

Journal Article

Cheong, B. E.; Yu, D.; Martinez-Seidel, F.; Ho, W. W. H.; Rupasinghe, T. W. T.; Dolferus, R.; Roessner, U.: The Effect of Cold Stress on the Root-Specific Lipidome of Two Wheat Varieties with Contrasting Cold Tolerance. Plants 11 (10), 1364 (2022)

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25.

Journal Article

Stefan, T.; Wu, X.; Zhang, Y.; Fernie, A. R.; Schulze, W.: Regulatory Modules of Metabolites and Protein Phosphorylation in Arabidopsis Genotypes With Altered Sucrose Allocation. Frontiers in Plant Science 13, 891405 (2022)

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26.

Journal Article

Borghi, M.; de Souza, L. P.; Tohge, T.; Mi, J.; Melandri, G.; Proost, S.; Martins, M.; Al-Babili, S.; Bouwmeester, H.; Fernie, A. R.: High-energy-level metabolism and transport occur at the transition from closed to open flowers. Plant Physiology (2022)

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27.

Journal Article

Moraes, T. A.; Mengin, V.; Peixoto, B.; Encke, B.; Krohn, N.; Höhne, M.; Krause, U.; Stitt, M.: The circadian clock mutant lhy cca1 elf3 paces starch mobilization to dawn despite severely disrupted circadian clock function. Plant Physiology, kiac226 (2022)

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28.

Journal Article

Zhao, Y.; Agrawal, N.; Ghareeb, H.; Habib, M. T.; Dickmeis, S.; Schwachtje, J.; Iven, T. E.; Kopka, J.; Feussner, I.; Schirawski, J.: The Sporisorium reilianum Effector Vag2 Promotes Head Smut Disease via Suppression of Plant Defense Responses. Journal of Fungi 8 (5), 498 (2022)

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29.

Journal Article

Hoang, Y.; Gryzik, S.; Hoppe, I.; Rybak, A.; Schädlich, M.; Kadner, I.; Walther, D.; Vera, J.; Radbruch, A.; Groth, D. et al.; Baumgart, S.; Baumgrass, R.: PRI: Re-analysis of a public mass cytometry dataset reveals patterns of effective tumor treatments. Frontiers in immunology 13, 849329 (2022)

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30.

Journal Article

Chew, Y. H.; Seaton, D. D.; Mengin, V.; Flis, A.; Mugford, S. T.; George, G. M.; Moulin, M.; Hume, A.; Zeeman, S. C.; Fitzpatrick, T. B. et al.; Smith, A. M.; Stitt, M.; Millar, A. J.: The Arabidopsis Framework Model version 2 predicts the organism-level effects of circadian clock gene mis-regulation. in silico Plants, diac010 (2022)

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31.

Journal Article

Fünfgeld, M. F.F.; Wang, W.; Ishihara, H.; Arrivault, S.; Feil, R.; Smith, A. M.; Stitt, M.; Lunn, J. E.; Niittylä, T.: Sucrose synthases are not involved in starch synthesis in Arabidopsis leaves. Nature Plants 8, pp. 574 - 582 (2022)

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32.

Journal Article

Li, P.; Xia, E.; Fu, J.; Xu, Y.; Zhao, X.; Tong, W.; Tang, Q.; Tadege, M.; Fernie, A. R.; Zhao, J.: Diverse roles of MYB transcription factors in regulating secondary metabolite biosynthesis, shoot development, and stress responses in tea plants (Camellia sinensis). The Plant Journal 110 (4), pp. 1144 - 1165 (2022)

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33.

Journal Article

Rodrigues-Salvador, A.; Lana-Costa, J.; Omena-Garcia, R.P.; Batista-Silva, W.; Scossa, F.; Rosado-Souza, L.; Pérez-Díaz, J.L.; Menezes-Silva, P.E.; DaMatta, F.M.; Sulpice, R. et al.; Araújo, W.L.; Zsögön, A.; Fernie, A. R.; Nunes-Nesi, A.: Metabolic shifts during fruit development in pungent and non-pungent peppers. Food Chemistry 375, 131850 (2022)

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34.

Journal Article

Amanda, D.; Frey, F. P.; Neumann, U.; Przybyl, M.; Šimura, J.; Zhang, Y.; Chen, Z.; Gallavotti, A.; Fernie, A. R.; Ljung, K. et al.; Acosta, I. F.: Auxin boosts energy generation pathways to fuel pollen maturation in barley. Current Biology 32 (8), pp. 1798 - 1811 (2022)

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35.

Journal Article

Rahimi, A.; Karami, O.; Lestari, A. D.; de Werk, T.; Amakorová, P.; Shi, D.; Novák, O.; Greb, T.; Offringa, R.: Control of cambium initiation and activity in Arabidopsis by the transcriptional regulator AHL15. Current Biology 32 (8), pp. 1764 - 1775.e3 (2022)

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36.

Journal Article

Siqueira, J.; Wakin, T.; Batista-Silva, W.; Silva, J.; Vicente, M.; Silva, J.; Clarindo, W.; Zsogon, A.; Peres, L.; De Veylder, L. et al.; Fernie, A. R.; Nunes-Nesi, A.; Araujo, W.: A long and stressful day: Photoperiod shapes aluminium tolerance in plants. Journal of Hazardous Materials 432, 128704 (2022)

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37.

Journal Article

Ayatollahi, Z.; Kazanaviciute, V.; Shubchynskyy, V.; Kvederaviciute, K.; Schwanninger, M.; Rozhon, W.; Stumpe, M.; Mauch, F.; Bartels, S.; Ulm, R. et al.; Balazadeh, S.; Mueller-Roeber, B.; Meskiene, I.; Schweighofer, A.: Dual control of MAPK activities by AP2C1 and MKP1 MAPK phosphatases regulates defence responses in Arabidopsis. Journal of Experimental Botany 73 (8), pp. 2369 - 2384 (2022)

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38.

Journal Article

Ishihara, H.; Alseekh, S.; Feil, R.; Perera, P.; George, G. M.; Niedzwiecki, P.; Arrivault, S.; Zeeman, S. C.; Fernie, A. R.; Lunn, J. E. et al.; Smith, A. M.; Stitt, M.: Rising rates of starch degradation during daytime and trehalose 6-phosphate optimize carbon availability. Plant Physiology, kiac162 (2022)

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39.

Journal Article

Skeffington, A. W.; Gentzel, M.; Ohara, A.; Milentyev, A.; Heintze, C.; Boettcher, L.; Goerlich, S.; Shevchenko, A.; Poulsen, N.; Kroeger, N.: Shedding light on silica biomineralization by comparative analysis of the silica-associated proteomes from three diatom species. The Plant Journal (2022)

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40.

Journal Article

Wu, M.; Dong, Y.; Zhang, Q.; Li, S.; Chang, L.; Loiacono, F.V.; Ruf, S.; Zhang, i.; Bock, R.: Efficient control of western flower thrips by plastid-mediated RNA interference. Proceedings of the National Academy of Sciences of the United States of America 119 (15), e2120081119 (2022)

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41.

Journal Article

Huc, J.; Dziasek, K.; Pachamuthu, K.; Woh, T.; Köhler, C.; Borges, F.: Bypassing reproductive barriers in hybrid seeds using chemically induced epimutagenesis. The Plant Cell 34 (3), pp. 989 - 1001 (2022)

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42.

Journal Article

Artins, A.; Caldana, C.: The metabolic homeostaTOR: The balance of holding on or letting grow. Current Opinion in Plant Biology 66, 102196 (2022)

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43.

Journal Article

Batista-Silva, W.; de Oliveira; Carvalho, A.; Oliveira Martins, A.; Siqueira, J. A.; Rodrigues-Salvador, A.; Omena-Garcia, R. P.; Medeiros, D.B.; Peres, L. E. P.; Ribeiro, D. M. et al.; Zsögön, A.; Fernie, A. R.; Nunes-Nesi, A.; Araújo, W. L.: Reduced auxin signalling through the cyclophilin DIAGEOTROPICA impacts tomato fruit development and metabolism during ripening. Journal of Experimental Botany, erac143 (2022)

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44.

Journal Article

Bock, R.: Transplastomic approaches for metabolic engineering. Current Opinion in Plant Biology 66, 102185 (2022)

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45.

Journal Article

Einhardt, A.M.; Oliveira, L.M.; Ferreira, S.; Araújo, W.L.; Medeiros, D.B.; Fernie, A. R.; Rodrigues, F.Á.: Defense responses and oxidative metabolism of glyphosate-resistant soybean plants infected by Phakopsora pachyrhizi modulated by glyphosate and nickel. Physiological and Molecular Plant Pathology 118, 101817 (2022)

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46.

Journal Article

Kosmacz, M.; Kerber, O.; Gorka, M.; Moreno, J.C.; Maruri-Lopez, I.; Minen, R.; Sampathkumar, A.; Nelson, A.; Skirycz, A.: 2 ',3 '-cAMP treatment mimics the stress molecular response in Arabidopsis thaliana. Plant Physiology 188 (4), pp. 1966 - 1978 (2022)

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47.

Journal Article

Luo, Y.; Zhang, M.; Liu, Y.; Liu, J.; Li, W.; Chen, G.; Peng, Y.; Jin, M.; Wei, W.; Jian, L. et al.; Yan, J.; Fernie, A. R.; Yan, J.: Genetic variation in YIGE1 contributes to ear length and grain yield in maize. New Phytologist 234 (2), pp. 513 - 526 (2022)

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48.

Journal Article

Naves, E. R.; Scossa, F.; Araújo, W. L.; Nunes-Nesi, A.; Fernie, A. R.; Zsögön, A.: Heterosis and reciprocal effects for agronomic and fruit traits in Capsicum pepper hybrids. Scientia Horticulturae 295, 110821 (2022)

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49.

Journal Article

Powell, A. F.; Feder, A.; Li, J.; Schmidt, M. H.-W.; Courtney, L.; Alseekh, S.; Jobson, E. M.; Vogel, A.; Xu, Y.; Lyon, D. et al.; Dumschott, K.; McHale, M.; Sulpice, R.; Bao, K.; Lal, R.; Duhan, A.; Hallab, A.; Denton, A. K.; Bolger, M. E.; Fernie, A. R.; Hind, S. R.; Mueller, L. A.; Martin, G. B.; Fei, Z.; Martin, C.; Giovannoni, J. J.; Strickler, S. R.; Usadel, B.: A Solanum lycopersicoides reference genome facilitates insights into tomato specialized metabolism and immunity. The Plant Journal (2022)

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50.

Journal Article

Rivas, F.J.M.; Blanco-Portales, R.; Moyano, E.; Alseekh, S.; Caballero, J. L.; Schwab, W.; Fernie, A. R.; Muñoz-Blanco, J.; Molina-Hidalgo, F. J.: Strawberry fruit FanCXE1 carboxylesterase is involved in the catabolism of volatile esters during the ripening process. Horticulture Research, uhac095 (2022)

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