Publications of the MPI | Max Planck Institute of Molecular Plant Physiology

Max Planck Institute of Molecular Plant Physiology

Journal Article (212)

151.

Journal Article

Pérez-Díaz, J.; Pérez-Díaz, J.R.; Medeiros, D.B.; Zuther, E.; Hong, C.-Y.; Nunes-Nesi, A.; Hincha, D. K.; Ruiz-Lara, S.; Casaretto, J.A.: Transcriptome analysis reveals potential roles of a barley ASR gene that confers stress tolerance in transgenic rice. Journal of Plant Physiology 238, pp. 29 - 39 (2019)

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152.

Journal Article

Perlikowski, D.; Augustyniak, A.; Masajada, K.; Skirycz, A.; Soja, A. M.; Eckhardt, Ä.; Wolter, G.; Kosmala, A.: Structural and metabolic alterations in root systems under limited water conditions in forage grasses of Lolium-Festuca complex. Plant Science 283, pp. 211 - 223 (2019)

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153.

Journal Article

Price, D.C.; Goodenough, U.W.; Roth, R.; Lee, J.-H.; Kariyawasam, T.; Mutwil, M.; Ferrari, C.; Facchinelli, F.; Ball, S.G.; Cenci, U. et al.; Chan, C.X.; Wagner, N.E.; Yoon, H.S.; Weber, A.P.M.; Bhattacharya, D.: Analysis of an improved Cyanophora paradoxa genome assembly. DNA research: an international journal for rapid publication of reports on genes and genomes 26 (4), pp. 287 - 299 (2019)

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154.

Journal Article

Razaghi-Moghadam, Z.; Namipashaki, A.; Farahmand, S.; Ansari-Pour, N.: Systems genetics of nonsyndromic orofacial clefting provides insights into its complex aetiology. European Journal of Human Genetics 27 (2), pp. 226 - 234 (2019)

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155.

Journal Article

Reinholdt, O.; Schwab, S.; Zhang, Y.; Reichheld, J.-P.; Fernie, A. R.; Hagemann, M.; Timm, S.: Redox-regulation of photorespiration through mitochondrial thioredoxin o1. Plant Physiology 181 (2), pp. 442 - 457 (2019)

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156.

Journal Article

Richter, J. A.; Behr, J. H.; Erban, A.; Kopka, J.; Zoerb, C.: Ion-dependent metabolic responses of Vicia faba L. to salt stress. Plant, Cell and Environment 42 (1-SI), pp. 295 - 309 (2019)

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157.

Journal Article

Riedel, S.; Siemiatkowska, B.; Watanabe, M.; Müller, C. S.; Schünemann, V.; Hoefgen, R.; Leimkühler, S.: The ABCB7-Like Transporter PexA in Rhodobacter capsulatus Is Involved in the Translocation of Reactive Sulfur Species. Frontiers in Microbiology 10, 406 (2019)

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158.

Journal Article

Rosado-Souza, L.; David, L.C.; Drapal, M.; Fraser, P.D.; Hofmann, J.; Klemens, P.A.W.; Ludewig, F.; Neuhaus, H.E.; Obata, T.; Perez-Fons, L. et al.; Schlereth, A.; Sonnewald, U.; Stitt, M.; Zeeman, S.C.; Zierer, W.; Fernie, A. R.: Cassava Metabolomics and Starch Quality. Current protocols in plant biology 4 (4), e20102 (2019)

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159.

Journal Article

Rosado-Souza, L.; Proost, S.; Moulin, M.; Bergmann, S.; Bocobza, S. E.; Aharoni, A.; Fitzpatrick, T. B.; Mutwil, M.; Fernie, A. R.; Obata, T.: Appropriate Thiamin Pyrophosphate Levels Are Required for Acclimation to Changes in Photoperiod. Plant Physiology 180 (1), pp. 185 - 197 (2019)

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160.

Journal Article

Ruf, S.; Forner, J.; Hasse, C.; Kroop, X.; Seeger, S.; Schollbach, L.; Schadach, A.; Bock, R.: High-efficiency generation of fertile transplastomic Arabidopsis plants. Nature Plants 5 (3), pp. 282 - 289 (2019)

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161.

Journal Article

Salem, M.A.; Giavalisco, P.: Regulatory-Associated Protein of TOR 1B (RAPTOR1B) regulates hormonal switches during seed germination in Arabidopsis thaliana. Plant Signaling & Behavior 14 (7), e1613130 (2019)

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162.

Journal Article

Salem, M.A.; Giavalisco, P.: Mutation in the Arabidopsis regulatory-associated protein TOR 1B (RAPTOR1B) leads to decreased jasmonates levels in leaf tissue. Plant Signaling & Behavior 14 (10), e1649567 (2019)

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163.

Journal Article

Sampathkumar, A.; Peaucelle, A.; Fujita, M.; Schuster, C.; Persson, S.; Wasteneys, G.O.; Meyerowitz, E.M.: Primary wall cellulose synthase regulates shoot apical meristem mechanics and growth. Development 146 (10), dev179036 (2019)

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164.

Journal Article

Sánchez-Guerrero, A.; Fernández del-Saz, N.; Florez-Sarasa, I. D.; Ribas-Carbó, M.; Fernie, A. R.; Jiménez, A.; Sevilla, F.: Coordinated responses of mitochondrial antioxidative enzymes, respiratory pathways and metabolism in Arabidopsis thaliana thioredoxin trxo1 mutants under salinity. Environmental and Experimental Botany 162, pp. 212 - 222 (2019)

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165.

Journal Article

Schneider, R.; Sampathkumar, A.; Persson, S.: Quantification of Cytoskeletal Dynamics in Time-Lapse Recordings. Current protocols in plant biology 4 (2), e20091 (2019)

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166.

Journal Article

Scholz, M.; Gaebelein, P.; Xue, H.; Mosebach, L.; Bergner, S.V.; Hippler, M.: Light-dependent N-terminal phosphorylation of LHCSR3 and LHCB4 are interlinked in Chlamydomonas reinhardtii. The Plant Journal 99 (5), pp. 877 - 894 (2019)

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167.

Journal Article

Schwachtje, J.; Whitcomb, S. J.; Firmino, A.; Zuther, E.; Hincha, D. K.; Kopka, J.: Induced, Imprinted, and Primed Responses to Changing Environments: Does Metabolism Store and Process Information? Frontiers in Plant Science 10, 106 (2019)

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168.

Journal Article

Schwacke, R.; Ponce-Soto, G. Y.; Krause, K.; Bolger, A. M.; Arsova, B.; Hallab, A.; Gruden, K.; Stitt, M.; Bolger, M. E.; Usadel, B.: MapMan4: A Refined Protein Classification and Annotation Framework Applicable to Multi-Omics Data Analysis. Molecular Plant 12 (6), pp. 879 - 892 (2019)

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169.

Journal Article

Scossa, F.; Roda, F.; Tohge, T.; Georgiev, M.I.; Fernie, A. R.: The Hot and the Colorful: Understanding the Metabolism, Genetics and Evolution of Consumer Preferred Metabolic Traits in Pepper and Related Species. Critical Reviews in Plant Sciences 38 (5-6), pp. 339 - 381 (2019)

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170.

Journal Article

Sedaghatmehr, M.; Thirumalaikumar, V. P.; Kamranfar, I.; Marmagne, A.; Masclaux-Daubresse, C.; Balazadeh, S.: A regulatory role of autophagy for resetting the memory of heat stress in plants. Plant, Cell and Environment 42 (3 - SI), pp. 1054 - 1064 (2019)

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171.

Journal Article

Shamsizadeh, S.; Goliaei, S.; Razaghi-Moghadam, Z.: CAMIRADA: Cancer microRNA association discovery algorithm, a case study on breast cancer. Journal of biomedical informatics 94, 103180 (2019)

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172.

Journal Article

Shapiguzov, A.; Vainonen, J.P.; Hunter, K.; Tossavainen, H.; Tiwari, A.; Järvi, S.; Hellman, M.; Aarabi, F.; Alseekh, S.; Wybouw, B. et al.; Van Der Kelen, K.; Nikkanen, L.; Krasensky-Wrzaczek, J.; Sipari, N.; Keinänen, M.; Tyystjärvi, E.; Rintamäki, E.; De Rybel, B.; Salojärvi, J.; Van Breusegem, F.; Fernie, A. R.; Brosché, M.; Permi, P.; Aro, E.-M.; Wrzaczek, M.; Kangasjärvi, J.; Kangasjärvi, J.: Arabidopsis RCD1 coordinates chloroplast and mitochondrial functions through interaction with ANAC transcription factors. eLife 8, 43284 (2019)

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173.

Journal Article

Shou, K.; Bremer, A.; Rindfleisch, T.; Knox-Brown, P.; Hirai, M.; Rekas, A.; Garvey, C.J.; Hincha, D. K.; Stadler, A.M.; Thalhammer, A.: Conformational selection of the intrinsically disordered plant stress protein COR15A in response to solution osmolarity-an X-ray and light scattering study. Physical Chemistry Chemical Physics 21 (34), pp. 18727 - 18740 (2019)

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174.

Journal Article

Smith, S. R.; Dupont, C. L.; McCarthy, J. K.; Broddrick, J. T.; Obornik, M.; Horak, A.; Fussy, Z.; Cihlar, J.; Kleessen, S.; Zheng, H. et al.; McCrow, J. P.; Hixson, K. K.; Araujo, W. L.; Nunes-Nesi, A.; Fernie, A. R.; Nikoloski, Z.; Palsson, B. O.; Allen, A. E.: Evolution and regulation of nitrogen flux through compartmentalized metabolic networks in a marine diatom. Nature Communications 10, 4552 (2019)

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175.

Journal Article

Sobanski, J.; Giavalisco, P.; Fischer, A.; Kreiner, J.M.; Walther, D.; Schöttler, M. A.; Pellizzer, T.; Golczyk, H.; Obata, T.; Bock, R. et al.; Sears, B.B.; Greiner, S.: Chloroplast competition is controlled by lipid biosynthesis in evening primroses. Proceedings of the National Academy of Sciences of the United States of America 116 (12), pp. 5665 - 5674 (2019)

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176.

Journal Article

Sokolowska, E.; Schlossarek, D.; Luzarowski, M.; Skirycz, A.: PROMIS: Global Analysis of PROtein-Metabolite Interactions. Current protocols in plant biology 4 (4), e20101 (2019)

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177.

Journal Article

Song, Y.; Li, G.; Nowak, J.; Zhang, X.; Xu, D.; Yang, X.; Huang, G.; Liang, W.; Yang, L.; Wang, C. et al.; Bulone, V.; Nikoloski, Z.; Hu, J.; Persson, S.; Zhang, D.: The Rice Actin-Binding Protein RMD Regulates Light-Dependent Shoot Gravitropism. Plant Physiology 181 (2), pp. 630 - 644 (2019)

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178.

Journal Article

Souza, P. V. L.; Lima-Melo, Y.; Carvalho, F. E.; Reichheld, J.-P.; Fernie, A. R.; Silveira, J. A. G.; Daloso, D. M.: Function and Compensatory Mechanisms Among the Components of the Chloroplastic Redox Network. Critical Reviews in Plant Sciences 38 (1), pp. 1 - 28 (2019)

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179.

Journal Article

Stanstrup, J.; Broeckling, C. D.; Helmus, R.; Hoffmann, N.; Mathé, E.; Naake, T.; Nicolotti, L.; Peters, K.; Rainer, J.; Salek, R. M. et al.; Schulze, T.; Schymanski, E. L.; Stravs, M. A.; Thévenot, E. A.; Treutler, H.; Weber, R. J. M.; Willighagen, E.; Witting, M.; Neumann, S.: The metaRbolomics Toolbox in Bioconductor and beyond. Metabolites 9 (10), 200 (2019)

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180.

Journal Article

Takahashi, D.; Gorka, M.; Erban, A.; Graf, A.; Kopka, J.; Zuther, E.; Hincha, D. K.: Both cold and sub-zero acclimation induce cell wall modification and changes in the extracellular proteome in Arabidopsis thaliana. Scientific Reports 9 (1), 2289 (2019)

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181.

Journal Article

Tan, J.; Zhang, F.; Karcher, D.; Bock, R.: Engineering of high-precision base editors for site-specific single nucleotide replacement. Nature Communications 10 (1), 439 (2019)

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182.

Journal Article

Tan, J.; Zhang, F.; Karcher, D.; Bock, R.: Author Correction: Engineering of high-precision base editors for site-specific single nucleotide replacement (Nature Communications, (2019), 10, 1, (439), 10.1038/s41467-018-08034-8). Nature Communications 10 (1), 2019 (2019)

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183.

Journal Article

Torralbo, F.; Vicente, R.; Morcuende, R.; Gonzalez-Murua, C.; Aranjuelo, I.: C and N metabolism in barley leaves and peduncles modulates responsiveness to changing CO2. Journal of Experimental Botany 70 (2), pp. 599 - 611 (2019)

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184.

Journal Article

Ulaszewska, M. M.; Weinert, C. H.; Trimigno, A.; Portmann, R.; Andres Lacueva, C.; Badertscher, R.; Brennan, L.; Brunius, C.; Bub, A.; Capozzi, F. et al.; Rosso, M. C.; Cordero, C. E.; Daniel, H.; Durand, S.; Egert, B.; Ferrario, P. G.; Feskens, E. J. M.; Franceschi, P.; Garcia-Aloy, M.; Giacomoni, F.; Giesbertz, P.; Gonzalez-Dominguez, R.; Hanhineva, K.; Hemeryck, L. Y.; Kopka, J.; Kulling, S. E.; Llorach, R.; Manach, C.; Mattivi, F.; Migne, C.; Munger, L. H.; Ott, B.; Picone, G.; Pimentel, G.; Pujos-Guillot, E.; Riccadonna, S.; Rist, M. J.; Rombouts, C.; Rubert, J.; Skurk, T.; Harsha, P. S. C. S.; Van Meulebroek, L.; Vanhaecke, L.; Vazquez-Fresno, R.; Wishart, D.; Vergeres, G.: Nutrimetabolomics: An Integrative Action for Metabolomic Analyses in Human Nutritional Studies. Molecular Nutriton & Food Research 63 (1-SI), 1800384 (2019)

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185.

Journal Article

Vaid, N.; Laitinen, R.: Diverse paths to hybrid incompatibility in Arabidopsis. The Plant Journal 97 (1-SI), pp. 199 - 213 (2019)

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186.

Journal Article

Vallarino, J. G.; Pott, D. M.; Cruz-Rus, E.; Miranda, L.; Medina-Minguez, J. J.; Valpuesta, V.; Fernie, A. R.; Sánchez-Sevilla, J. F.; Osorio, S.; Amaya, I.: Identification of quantitative trait loci and candidate genes for primary metabolite content in strawberry fruit. Horticulture Research 6 (1), 4 (2019)

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187.

Journal Article

Van Dingenen, J.; Hanzalova, K.; Salem, M.A.; Abel, C.; Seibert, T.; Giavalisco, P.; Wahl, V.: Limited nitrogen availability has cultivar-dependent effects on potato tuber yield and tuber quality traits. Food Chemistry 288, pp. 170 - 177 (2019)

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188.

Journal Article

Varghese, F.; Kabasakal, B.V.; Cotton, C. A. R.; Schumacher, J.; Rutherford, A.W.; Fantuzzi, A.; Murray, J.W.: A low-potential terminal oxidase associated with the irononly nitrogenase from the nitrogen-fixing bacterium Azotobacter vinelandii. The Journal of Biological Chemistry 294 (24), pp. 9367 - 9376 (2019)

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189.

Journal Article

Vicente, R.; Bolger, A. M.; Martinez-Carrasco, R.; Pérez, P.; Gutiérrez, E.; Usadel, B.; Morcuende, R.: De novo transcriptome analysis of durum wheat flag leaves provides new insights into the regulatory response to elevated CO2 and high temperature. Frontiers in Plant Science 10, 1605 (2019)

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190.

Journal Article

Vyse, K.; Pagter, M.; Zuther, E.; Hincha, D. K.: Deacclimation after cold acclimation - a crucial, but widely neglected part of plant winter survival. The Journal of Experimental Biology 70 (18), pp. 4595 - 4604 (2019)

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191.

Journal Article

Wang, H.; Yan, S.; Xin, H.; Huang, W.; Zhang, H.; Teng, S.; Yu, Y.-C.; Fernie, A. R.; Lu, X.; Li, P. et al.; Li, S.; Zhang, C.; Ruan, Y.-L.; Chen, L.-Q.; Lang, Z.: A Subsidiary Cell-Localized Glucose Transporter Promotes Stomatal Conductance and Photosynthesis. Plant Cell 31 (6), pp. 1328 - 1343 (2019)

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192.

Journal Article

Wang, S.; Alseekh, S.; Fernie, A. R.; Luo, J.: The Structure and Function of Major Plant Metabolite Modifications. Molecular Plant 12 (7), pp. 899 - 919 (2019)

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193.

Journal Article

Wany, A.; Gupta, A. K.; Kumari, A.; Mishra, S.; Singh, N.; Pandey, S.; Vanvari, R.; Igamberdiev, A. U.; Fernie, A. R.; Gupta, K. J.: Nitrate nutrition influences multiple factors in order to increase energy efficiency under hypoxia in Arabidopsis. Annals of Botany 123 (4), pp. 691 - 705 (2019)

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194.

Journal Article

Webb, A. A. R.; Seki, M.; Satake, A.; Caldana, C.: Continuous dynamic adjustment of the plant circadian oscillator. Nature Communications 10 (1), 550 (2019)

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195.

Journal Article

Weber, A. P. M.; Bar-Even, A.: Update: Improving the Efficiency of Photosynthetic Carbon Reactions. Plant Physiology 179 (3), pp. 803 - 812 (2019)

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196.

Journal Article

Wenke, K.; Kopka, J.; Schwachtje, J.; van Dongen, J. T.; Piechulla, B.: Volatiles of rhizobacteria Serratia and Stenotrophomonas alter growth and metabolite composition of Arabidopsis thaliana. Plant Biology 21 (SI suppl.), pp. 109 - 119 (2019)

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197.

Journal Article

Wu, G.; Meyer, E. H.; Richter, A. S.; Schuster, M.; Ling, Q.; Schöttler, M. A.; Walther, D.; Zoschke, R.; Grimm, B.; Jarvis, R. P. et al.; Bock, R.: Control of retrograde signalling by protein import and cytosolic folding stress. Nature Plants 5 (5), pp. 525 - 538 (2019)

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198.

Journal Article

Wu, G.; Meyer, E. H.; Wu, S.; Bock, R.: Extensive Posttranscriptional Regulation of Nuclear Gene Expression by Plastid Retrograde Signals. Plant Physiology 180 (4), pp. 2034 - 2048 (2019)

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199.

Journal Article

Yang, L.; Perrera, V.; Saplaoura, E.; Apelt, F.; Bahin, M.; Kramdi, A.; Olas, J.; Mueller-Roeber, B.; Sokolowska, E.; Zhang, W. et al.; Li, R.; Pitzalis, N.; Heinlein, M.; Zhang, W.; Genovesio, A.; Colot, V.; Kragler, F.: m5C Methylation Guides Systemic Transport of Messenger RNA over Graft Junctions in Plants. Current Biology 29, pp. 2465 - 2476 (2019)

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200.

Journal Article

Yoshida, T.; Christmann, A.; Yamaguchi-Shinozaki, K.; Grill, E.; Fernie, A. R.: Revisiting the Basal Role of ABA - Roles Outside of Stress. Trends in Plant Science 24 (7), pp. 625 - 635 (2019)

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