Publications of the MPI | Max Planck Institute of Molecular Plant Physiology

Max Planck Institute of Molecular Plant Physiology

Journal Article (171)

101.

Journal Article

Flis, A.; Fernandez, A. P.; Zielinski, T.; Mengin, V.; Sulpice, R.; Stratford, K.; Hume, A.; Pokhilko, A.; Southern, M. M.; Seaton, D. D. et al.; McWatters, H. G.; Stitt, M.; Halliday, K. J.; Millar, A. J.: Defining the robust behaviour of the plant clock gene circuit with absolute RNA timeseries and open infrastructure. Open biology 5 (10), 150042 (2015)

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102.

Journal Article

Fly, R.; Lloyd, J.; Krueger, S.; Fernie, A. R.; van der Merwe, M. J.: Improvements to define mitochondrial metabolomics using nonaqueous fractionation. Methods in Molecular Biology 1305, pp. 197 - 210 (2015)

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103.

Journal Article

Fristedt, R.; Martins, N. F.; Strenkert, D.; Clarke, C. A.; Suchoszek, M.; Thiele, W.; Schöttler, M. A.; Merchant, S. S.: The Thylakoid Membrane Protein CGL160 Supports CF1CF0 ATP Synthase Accumulation in Arabidopsis thaliana. PLoS One 10 (4), e0121658 (2015)

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104.

Journal Article

Garapati, P.; Feil, R.; Lunn, J. E.; Van Dijck, P.; Balazadeh, S.; Mueller-Roeber, B.: Transcription Factor Arabidopsis Activating Factor1 Integrates Carbon Starvation Responses with Trehalose Metabolism. Plant Physiology 169 (1), pp. 379 - 390 (2015)

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105.

Journal Article

Garapati, P.; Xue, G.-P.; Munne-Bosch, S.; Balazadeh, S.: Transcription Factor ATAF1 in Arabidopsis Promotes Senescence by Direct Regulation of Key Chloroplast Maintenance and Senescence Transcriptional Cascades. Plant Physiology 168 (3), pp. 1122 - 1139 (2015)

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106.

Journal Article

Gaude, N.; Bortfeld, S.; Erban, A.; Kopka, J.; Krajinski, F.: Symbiosis dependent accumulation of primary metabolites in arbuscule-containing cells. BMC Plant Biology 15 (1), 234 (2015)

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107.

Journal Article

Glaubitz, U.; Erban, A.; Kopka, J.; Hincha, D. K.; Zuther, E.: High night temperature strongly impacts TCA cycle, amino acid and polyamine biosynthetic pathways in rice in a sensitivity-dependent manner. Journal of Experimental Botany 66 (20), pp. 6385 - 6397 (2015)

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108.

Journal Article

Greiner, S.; Sobanski, J.; Bock, R.: Why are most organelle genomes transmitted maternally? Bioessays 37 (1), pp. 80 - 94 (2015)

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109.

Journal Article

Harb, J.; Alseekh, S.; Tohge, T.; Fernie, A. R.: Profiling of primary metabolites and flavonols in leaves of two table grape varieties collected from semiarid and temperate regions. Phytochemistry 117, pp. 444 - 455 (2015)

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110.

Journal Article

Heise, R.; Fernie, A. R.; Stitt, M.; Nikoloski, Z.: Pool size measurements facilitate the determination of fluxes at branching points in non-stationary metabolic flux analysis: the case of Arabidopsis thaliana. Frontiers in Plant Science 6, 386 (2015)

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111.

Journal Article

Hubberten, H. M.; Sieh, D.; Zoeller, D.; Hoefgen, R.; Krajinski, F.: Medicago truncatula Mtha1-2 mutants loose metabolic responses to mycorrhizal colonization. Plant Signaling & Behavior 10 (6), e989025 (2015)

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112.

Journal Article

Ikeue, D.; Schudoma, C.; Zhang, W.; Ogata, Y.; Sakamoto, T.; Kurata, T.; Furuhashi, T.; Kragler, F.; Aoki, K.: A bioinformatics approach to distinguish plant parasite and host transcriptomes in interface tissue by classifying RNA-Seq reads. Plant Methods 11, 34 (2015)

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113.

Journal Article

Ishihara, H.; Obata, T.; Sulpice, R.; Fernie, A. R.; Stitt, M.: Quantifying Protein Synthesis and Degradation in Arabidopsis by Dynamic 13CO2 Labeling and Analysis of Enrichment in Individual Amino Acids in Their Free Pools and in Protein. Plant Physiology 168 (1), pp. 74 - 93 (2015)

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114.

Journal Article

Jiang, H.; Yi, J.; Boavida, L. C.; Chen, Y.; Becker, J. D.; Köhler, C.; McCormick, S.: Intercellular communication in Arabidopsis thaliana pollen discovered via AHG3 transcript movement from the vegetative cell to sperm. Proceedings of the National Academy of Sciences of the United States of America 112 (43), pp. 13378 - 13383 (2015)

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115.

Journal Article

Klähn, S.; Orf, I.; Schwarz, D.; Matthiessen, J. K. F.; Kopka, J.; Hess, W. R.; Hagemann, M.: Integrated Transcriptomic and Metabolomic Characterization of the Low-Carbon Response Using an ndhR Mutant of Synechocystis sp. PCC 6803. Plant physiology 169 (3), pp. 1540 - 156 (2015)

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116.

Journal Article

Koehl, K. I.: Growing rice in controlled environments. Annals of Applied Biology 167 (2), pp. 157 - 177 (2015)

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117.

Journal Article

Koehl, K. I.; Gremmels, J.: A software tool for the input and management of phenotypic data using personal digital assistants and other mobile devices. Plant methods 11, 25 (2015)

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118.

Journal Article

Koeslin-Findeklee, F.; Rizi, V. S.; Becker, M. A.; Parra-Londono, S.; Arif, M.; Balazadeh, S.; Mueller-Roeber, B.; Kunze, R.; Horst, W. J.: Transcriptomic analysis of nitrogen starvation- and cultivar-specific leaf senescence in winter oilseed rape (Brassica napus L.). Plant Science 233, pp. 174 - 185 (2015)

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119.

Journal Article

Korkuc, P.; Walther, D.: Physicochemical characteristics of structurally determined metabolite-protein and drug-protein binding events with respect to binding specificity. Frontiers in molecular biosciences 2, 51 (2015)

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120.

Journal Article

Kosmacz, M.; Parlanti, S.; Schwarzlander, M.; Kragler, F.; Licausi, F.; van Dongen, J. T.: The stability and nuclear localization of the transcription factor RAP2.12 are dynamically regulated by oxygen concentration. Plant, Cell and Environment 38 (6), pp. 1094 - 1103 (2015)

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121.

Journal Article

Kragler, F.: Analysis of the conductivity of plasmodesmata by microinjection. Methods in Molecular Biology 1217, pp. 173 - 184 (2015)

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122.

Journal Article

Kuehn, K.; Yin, G.; Duncan, O.; Law, S. R.; Kubiszewski-Jakubiak, S.; Kaur, P.; Meyer, E. H.; Wang, Y.; Small, C. C. d. F.; Giraud, E. et al.; Narsai, R.; Whelan, J.: Decreasing Electron Flux through the Cytochrome and/or Alternative Respiratory Pathways Triggers Common and Distinct Cellular Responses Dependent on Growth Conditions. Plant Physiology 167 (1), pp. 228 - 250 (2015)

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123.

Journal Article

Lambers, H.; Finnegan, P. M.; Jost, R.; Plaxton, W. C.; Shane, M. W.; Stitt, M.: Phosphorus nutrition in Proteaceae and beyond. Nature Plants 1, 15109 (2015)

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124.

Journal Article

Le, M. Q.; Pagter, M.; Hincha, D. K.: Global changes in gene expression, assayed by microarray hybridization and quantitative RT-PCR, during acclimation of three Arabidopsis thaliana accessions to sub-zero temperatures after cold acclimation. Plant Molecular Biology 87 (1-2), pp. 1 - 15 (2015)

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125.

Journal Article

Leida, C.; Moser, C.; Esteras, C.; Sulpice, R.; Lunn, J. E.; de langen, F.; Monforte, A. J.; Pico, B.: Variability of candidate genes, genetic structure and association with sugar accumulation and climacteric behavior in a broad germplasm collection of melon (Cucumis melo L.). BMC Genetics 16, 28 (2015)

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126.

Journal Article

Li, N.; Gügel, I. L.; Giavalisco, P.; Zeisler, V.; Schreiber, L.; Soll, J.; Philippar, K.: FAX1, a Novel Membrane Protein Mediating Plastid Fatty Acid Export. PLoS Biology 13 (2), e1002053 (2015)

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127.

Journal Article

Li, X.; Lawas, L. M. F.; Malo, R.; Glaubitz, U.; Erban, A.; Mauleon, R.; Heuer, S.; Zuther, E.; Kopka, J.; Hincha, D. K. et al.; Jagadish, K. S. V.: Metabolic and transcriptomic signatures of rice floral organs reveal sugar starvation as a factor in reproductive failure under heat and drought stress. Plant, Cell and Environment 38 (10), pp. 2171 - 2192 (2015)

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128.

Journal Article

Liu, Z.; Persson, S.; Sanchez-Rodriguez, C.: At the border: the plasma membrane-cell wall continuum. Journal of Experimental Botany 66 (6), pp. 1553 - 1563 (2015)

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129.

Journal Article

Liu, Z.; Persson, S.; Zhang, Y.: The connection of cytoskeletal network with plasma membrane and the cell wall. Journal of Integrative Plant Biology 57 (4), pp. 330 - 340 (2015)

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130.

Journal Article

Lotkowska, M. E.; Tohge, T.; Fernie, A. R.; Xue, G.-P.; Balazadeh, S.; Mueller-Roeber, B.: The Arabidopsis Transcription Factor MYB112 Promotes Anthocyanin Formation during Salinity and under High Light Stress. Plant Cell Physiology 169 (3), pp. 1862 - 1880 (2015)

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131.

Journal Article

Luo, Y.; Scholl, S.; Doering, A.; Zhang, Y.; Irani, N. G.; Di Rubbo, S.; Neumetzler, L.; Krishnamoorthy, P.; Van Houtte, I.; Mylle, E. et al.; Bischoff, V.; Vernhettes, S.; Winne, J.; Friml, J.; Stierhof, Y.-D.; Schumacher, K.; Persson, S.; Russinova, E.: V-ATPase activity in the TGN/EE is required for exocytosis and recycling in Arabidopsis. Nature Plants 1, 15094 (2015)

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132.

Journal Article

Mucha, S.; Walther, D.; Mueller, T. M.; Hincha, D. K.; Glawischnig, E.: Substantial reprogramming of the Eutrema salsugineum (Thellungiella salsuginea) transcriptome in response to UV and silver nitrate challenge. BMC Plant Biology 15, 137 (2015)

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133.

Journal Article

Nikoloski, Z.; Perez-Storey, R.; Sweetlove, L. J.: Inference and Prediction of Metabolic Network Fluxes. Plant Physiology 169 (3), pp. 1443 - 1455 (2015)

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134.

Journal Article

Obata, T.; Witt, S.; Lisec, J.; Palacios-Rojas, N.; Florez-Sarasa, I. D.; Yousfi, S.; Araus, J. L.; Cairns, J. E.; Fernie, A. R.: Metabolite Profiles of Maize Leaves in Drought, Heat, and Combined Stress Field Trials Reveal the Relationship between Metabolism and Grain Yield. Plant Physiology 169 (4), pp. 2665 - 2683 (2015)

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135.

Journal Article

Omranian, N.; Kleessen, S.; Tohge, T.; Klie, S.; Basler, G.; Mueller-Roeber, B.; Fernie, A. R.; Nikoloski, Z.: Differential metabolic and coexpression networks of plant metabolism. Trends in Plant Science 20 (5), pp. 266 - 268 (2015)

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136.

Journal Article

Omranian, N.; Mueller-Roeber, B.; Nikoloski, Z.: Segmentation of biological multivariate time-series data. Scientific Reports 5, p. 8937 - 8937 (2015)

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137.

Journal Article

Orf, I.; Klähn, S.; Schwarz, D.; Frank, M.; Hess, W. R.; Hagemann, M.; Kopka, J.: Integrated Analysis of Engineered Carbon Limitation in a Quadruple CO2/HCO3- Uptake Mutant of Synechocystis sp. PCC 6803. Plant Cell Physiology 169 (3), pp. 1787 - 1806 (2015)

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138.

Journal Article

Pant, B. D.; Burgos, A.; Pant, P.; Cuadros-Inostroza, A. C.; Willmitzer, L.; Scheible, W.-R.: The transcription factor PHR1 regulates lipid remodeling and triacylglycerol accumulation in Arabidopsis thaliana during phosphorus starvation. Journal of Experimental Botany 66 (7), pp. 1907 - 1918 (2015)

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139.

Journal Article

Pant, B.-D.; Pant, P.; Erban, A.; Huhman, D.; Kopka, J.; Scheible, W.-R.: Identification of primary and secondary metabolites with phosphorus status-dependent abundance in Arabidopsis, and of the transcription factor PHR1 as a major regulator of metabolic changes during phosphorus limitation. Plant, Cell and Environment 38 (1), pp. 172 - 187 (2015)

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140.

Journal Article

Pham, P. A.; Wahl, V.; Tohge, T.; de Souza, L. P.; Zhang, Y.; Do, P. T.; Olas, J. J.; Stitt, M.; Araujo, W. L.; Fernie, A. R.: Analysis of knockout mutants reveals non-redundant functions of poly(ADP-ribose)polymerase isoforms in Arabidopsis. Plant Molecular Biology 89 (4-5), pp. 319 - 338 (2015)

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141.

Journal Article

Pilkington, S. M.; Encke, B.; Krohn, N.; Höhne, M.; Stitt, M.; Pyl, E. T.: Relationship between starch degradation and carbon demand for maintenance and growth in Arabidopsis thaliana in different irradiance and temperature regimes. Plant, Cell and Environment 38 (1), pp. 157 - 171 (2015)

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142.

Journal Article

Pinhassi, R. I.; Kallmann, D.; Soper, G.; Larom, S.; Linkov, A.; Boulouis, A.; Schöttler, M. A.; Bock, R.; Rothschild, A.; Adir, N. et al.; Schuster, G.: Photosynthetic Membranes of Synechocystis or Plants Convert Sunlight to Photocurrent through Different Pathways due to Different Architectures. PLoS One 10 (4), e0122616 (2015)

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143.

Journal Article

Plaza, S.; Weber, J.; Pajonk, S.; Thomas, J.; Talke, I. N.; Schellenberg, M.; Pradervand, S.; Burla, B.; Geisler, M.; Martinoia, E. et al.; Kr{ä}mer, U.: Wounding of Arabidopsis halleri leaves enhances cadmium accumulation that acts as a defense against herbivory. BioMetals 28 (3), pp. 521 - 528 (2015)

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144.

Journal Article

Popova, A. V.; Rausch, S.; Hundertmark, M.; Gibon, Y.; Hincha, D. K.: The intrinsically disordered protein LEA7 from Arabidopsis thaliana protects the isolated enzyme lactate dehydrogenase and enzymes in a soluble leaf proteome during freezing and drying. Biochimica et Biophysica Acta (BBA) - General Subjects 1854 (10 Pt A), pp. 1517 - 1525 (2015)

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145.

Journal Article

Proost, S.; Van Bel, M.; Vaneechoutte, D.; Van de Peer, Y.; Inze, D.; Mueller-Roeber, B.; Vandepoele, K.: PLAZA 3.0: an access point for plant comparative genomics. Nucleic Acids Research 43 (Database issue), pp. D974 - D981 (2015)

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146.

Journal Article

Rebernig, C. A.; Lafon-Placette, C.; Hatorangan, M. R.; Slotte, T.; Köhler, C.: Non-reciprocal Interspecies Hybridization Barriers in the Capsella Genus Are Established in the Endosperm. PLoS Genetics 11 (6), e1005295 (2015)

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147.

Journal Article

Sade, D.; Shriki, O.; Cuadros-Inostroza, A. C.; Tohge, T.; Semel, Y.; Haviv, Y.; Willmitzer, L.; Fernie, A. R.; Czosnek, H.; Brotman, Y.: Comparative metabolomics and transcriptomics of plant response to Tomato yellow leaf curl virus infection in resistant and susceptible tomato cultivars. Metabolomics 11 (1), pp. 81 - 97 (2015)

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148.

Journal Article

Saladie, M.; Canizares, J.; Phillips, M. A.; Rodriguez-Concepcion, M.; Larrigaudiere, C.; Gibon, Y.; Stitt, M.; Lunn, J. E.; Garcia-Mas, J.: Comparative transcriptional profiling analysis of developing melon (Cucumis melo L.) fruit from climacteric and non-climacteric varieties. BMC Genomics 16, 440 (2015)

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149.

Journal Article

Schneider, R.; Persson, S.: Connecting two arrays: the emerging role of actin-microtubule cross-linking motor proteins. Frontiers in Plant Science 6, 415 (2015)

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150.

Journal Article

Schoft, V. K.; Chumak, N.; Bindics, J.; Slusarz, L.; Twell, D.; Köhler, C.; Tamaru, H.: SYBR Green-activated sorting of Arabidopsis pollen nuclei based on different DNA/RNA content. Plant Reproduction 28 (1), pp. 61 - 72 (2015)

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