Journal Article (198)

51.
Journal Article
Deinlein, U.; Weber, M.; Schmidt, H.; Rensch, S.; Trampczynska, A.; Hansen, T. H.; Husted, S.; Schjoerring, J. K.; Talke, I. N.; Kraemer, U. et al.; Clemens, S.: Elevated Nicotianamine Levels in Arabidopsis halleri Roots Play a Key Role in Zinc Hyperaccumulation. Plant Cell 24 (2), pp. 708 - 723 (2012)
52.
Journal Article
Delgado-Cerezo, M.; Sanchez-Rodriguez, C.; Escudero, V.; Miedes, E.; Fernandez, P. V.; Jorda, L.; Hernandez-Blanco, C.; Sanchez-Vallet, A.; Bednarek, P.; Schulze-Lefert, P. et al.; Somerville, S.; Estevez, J. M.; Persson, S.; Molina, A.: Arabidopsis Heterotrimeric G-protein Regulates Cell Wall Defense and Resistance to Necrotrophic Fungi. Molecular Plant 5 (1), pp. 98 - 114 (2012)
53.
Journal Article
Detmann, K. C.; Araujo, W. L.; Martins, S. C. V.; Sanglard, L. M. V. P.; Reis, J. V.; Detmann, E.; Rodrigues, F. A.; Nunes-Nesi, A.; Fernie, A. R.; DaMatta, F. M.: Silicon nutrition increases grain yield, which, in turn, exerts a feed-forward stimulation of photosynthetic rates via enhanced mesophyll conductance and alters primary metabolism in rice. New Phytologist 196 (3), pp. 752 - 762 (2012)
54.
Journal Article
Draffehn, A. M.; Durek, P.; Nunes-Nesi, A.; Stich, B.; Fernie, A. R.; Gebhardt, C.: Tapping natural variation at functional level reveals allele specific molecular characteristics of potato invertase Pain-1. Plant, Cell and Environment 35 (12), pp. 2143 - 2154 (2012)
55.
Journal Article
Dunn, W. B.; Erban, A.; Weber, R. J. M.; Creek, D. J.; Brown, M.; Breitling, R.; Hankemeier, T.; Goodacre, R.; Neumann, S.; Kopka, J. et al.; Viant, M. R.: Mass appeal: metabolite identification in mass spectrometry-focused untargeted metabolomics. Metabolomics 9 (S1), pp. 44 - 66 (2012)
56.
Journal Article
Engelsberger, W. R.; Schulze, W. X.: Nitrate and ammonium lead to distinct global dynamic phosphorylation patterns when resupplied to nitrogen-starved Arabidopsis seedlings. Plant Journal 69 (6), pp. 978 - 995 (2012)
57.
Journal Article
Esmaeilpour-Jahromi, M.; Ahmadi, A.; Lunn, J. E.; Abbasi, A.; Poustini, K.; Joudi, M.: Variation in grain weight among Iranian wheat cultivars: the importance of stem carbohydrate reserves in determining final grain weight under source limited conditions. Australian Journal of Crop Science 6, pp. 1508 - 1515 (2012)
58.
Journal Article
Faix, B.; Radchuk, V.; Nerlich, A.; Hummer, C.; Radchuk, R.; Emery, R. J. N.; Keller, H.; Gotz, K. P.; Weschke, W.; Geigenberger, P. et al.; Weber, H.: Barley grains, deficient in cytosolic small subunit of ADP-glucose pyrophosphorylase, reveal coordinate adjustment of C:N metabolism mediated by an overlapping metabolic-hormonal control. Plant Journal 69 (6), pp. 1077 - 1093 (2012)
59.
Journal Article
Fernandez, O.; Theocharis, A.; Bordiec, S.; Feil, R.; Jacquens, L.; Clement, C.; Fontaine, F.; Barka, E. A.: Burkholderia phytofirmans PsJN Acclimates Grapevine to Cold by Modulating Carbohydrate Metabolism. Molecular Plant-Microbe Interactions 25 (4), pp. 496 - 504 (2012)
60.
Journal Article
Fernandez, O.; Vandesteene, L.; Feil, R.; Baillieul, F.; Lunn, J. E.; Clement, C.: Trehalose metabolism is activated upon chilling in grapevine and might participate in Burkholderia phytofirmans induced chilling tolerance. Planta 236 (2), pp. 355 - 369 (2012)
61.
Journal Article
Fernie, A. R.: Grand Challenges in Plant Systems Biology: Closing the Circle(s). Frontiers in Plant Science 3, p. 35 (2012)
62.
Journal Article
Fernie, A. R.; Obata, T.; Allen, A. E.; Araujo, W. L.; Bowler, C.: Leveraging metabolomics for functional investigations in sequenced marine diatoms. Trends in Plant Science 17 (7), pp. 395 - 403 (2012)
63.
Journal Article
Fernie, A. R.; Stitt, M.: On the discordance of metabolomics with proteomics and transcriptomics: coping with increasing complexity in logic, chemistry, and network interactions scientific correspondence. Plant Physiology 158 (3), pp. 1139 - 1145 (2012)
64.
Journal Article
Ferraro, G.; Bortolotti, S.; Mortera, P.; Schlereth, A.; Stitt, M.; Carrari, F.; Kamenetzky, L.; Valle, E. M.: Novel glutamate dehydrogenase genes show increased transcript and protein abundances in mature tomato fruits. Journal of Plant Physiology 169 (9), pp. 899 - 907 (2012)
65.
Journal Article
Fichtenbauer, D.; Xu, X. M.; Jackson, D.; Kragler, F.: The chaperonin CCT8 facilitates spread of tobamovirus infection. Plant Signaling & Behavior 7 (3), pp. 318 - 321 (2012)
66.
Journal Article
Fisahn, J.; Yazdanbakhsh, N.; Klingele, E.; Barlow, P.: Arabidopsis thaliana root growth kinetics and lunisolar tidal acceleration. New Phytologist 195 (2), pp. 346 - 355 (2012)
67.
Journal Article
Fitzpatrick, T. B.; Basset, G. J.; Borel, P.; Carrari, F.; DellaPenna, D.; Fraser, P. D.; Hellmann, H.; Osorio, S.; Rothan, C.; Valpuesta, V. et al.; Caris-Veyrat, C.; Fernie, A. R.: Vitamin deficiencies in humans: can plant science help? The Plant Cell 24 (2), pp. 395 - 414 (2012)
68.
Journal Article
Flamholz, A.; Noor, E.; Bar-Even, A.; Milo, R.: eQuilibrator-the biochemical thermodynamics calculator. Nucleic Acids Research 40 (D1), pp. D770 - D775 (2012)
69.
Journal Article
Florez-Sarasa, I.; Araujo, W. L.; Wallstrom, S. V.; Rasmusson, A. G.; Fernie, A. R.; Ribas-Carbo, M.: Light-responsive metabolite and transcript levels are maintained following a dark-adaptation period in leaves of Arabidopsis thaliana. New Phytologist 195 (1), pp. 136 - 148 (2012)
70.
Journal Article
Fuehrs, H.; Specht, A.; Erban, A.; Kopka, J.; Horst, W. J.: Functional associations between the metabolome and manganese tolerance in Vigna unguiculata. Journal of Experimental Botany 63 (1), pp. 329 - 340 (2012)
71.
Journal Article
Fuentes, I.; Karcher, D.; Bock, R.: Experimental reconstruction of the functional transfer of intron-containing plastid genes to the nucleus. Current Biology 22 (9), pp. 763 - 771 (2012)
72.
Journal Article
Gaude, N.; Bortfeld, S.; Duensing, N.; Lohse, M.; Krajinski, F.: Arbuscule-containing and non-colonized cortical cells of mycorrhizal roots undergo extensive and specific reprogramming during arbuscular mycorrhizal development. Plant Journal 69 (3), pp. 510 - 528 (2012)
73.
Journal Article
Gaude, N.; Schulze, W. X.; Franken, P.; Krajinski, F.: Cell type-specific protein and transcription profiles implicate periarbuscular membrane synthesis as an important carbon sink in the mycorrhizal symbiosis. Plant Signaling & Behavior 7 (4), pp. 461 - 464 (2012)
74.
Journal Article
Gechev, T. S.; Benina, M.; Obata, T.; Tohge, T.; Sujeeth, N.; Minkov, I.; Hille, J.; Temanni, M. R.; Marriott, A. S.; Bergstrom, E. et al.; Thomas-Oates, J.; Antonio, C.; Mueller-Roeber, B.; Schippers, J. H.; Fernie, A. R.; Toneva, V.: Molecular mechanisms of desiccation tolerance in the resurrection glacial relic Haberlea rhodopensis. Cellular and Molecular Life Sciences 70 (4), pp. 689 - 709 (2012)
75.
Journal Article
Geisler, D. A.; Päpke, C.; Obata, T.; Nunes-Nesi, A.; Matthes, A.; Schneitz, K.; Maximova, E.; Araujo, W. L.; Fernie, A. R.; Persson, S.: Downregulation of the delta-Subunit Reduces Mitochondrial ATP Synthase Levels, Alters Respiration, and Restricts Growth and Gametophyte Development in Arabidopsis. The Plant Cell 24 (7), pp. 2792 - 2811 (2012)
76.
Journal Article
Girbig, D.; Grimbs, S.; Selbig, J.: Systematic Analysis of Stability Patterns in Plant Primary Metabolism. PLoS One 7 (4), p. e34686 (2012)
77.
Journal Article
Girbig, D.; Selbig, J.; Grimbs, S.: A MATLAB toolbox for structural kinetic modeling. Bioinformatics 28 (19), pp. 2546 - 2547 (2012)
78.
Journal Article
Gomez, S.; Steinbrenner, A. D.; Osorio, S.; Schueller, M.; Ferrieri, R. A.; Fernie, A. R.; Orians, C. M.: From shoots to roots: transport and metabolic changes in tomato after simulated feeding by a specialist lepidopteran. Entomologia Experimentalis et Applicata 144 (1), pp. 101 - 111 (2012)
79.
Journal Article
Gouws, L. M.; Botes, E.; Wiese, A. J.; Trenkamp, S.; Torres-Jerez, I.; Tang, Y.; Hills, P. N.; Usadel, B.; Lloyd, J. R.; Fernie, A. R. et al.; Kossmann, J.; van der Merwe, M. J.: The plant growth promoting substance, lumichrome, mimics starch, and ethylene-associated symbiotic responses in lotus and tomato roots. Frontiers in Plant Science 3, p. 120 (2012)
80.
Journal Article
Gruden, K.; Hren, M.; Herman, A.; Blejec, A.; Albrecht, T.; Selbig, J.; Bauer, C.; Schuchardt, J.; Or-Guil, M.; Zupancic, K. et al.; Svajger, U.; Stabuc, B.; Ihan, A.; Kopitar, A. N.; Ravnikar, M.; Knezevic, M.; Rozman, P.; Jeras, M.: A "Crossomics" Study Analysing Variability of Different Components in Peripheral Blood of Healthy Caucasoid Individuals. PLoS One 7 (1), p. e28761 (2012)
81.
Journal Article
Güell, O.; Sagués, F.; Basler, G.; Nikoloski, Z.; Serrano, M. S.: Assessing the significance of knockout cascades in metabolic networks. Journal of Computational Interdisciplinary Sciences 3 (1-2), pp. 45 - 53 (2012)
82.
Journal Article
Guo, K. T.; Juerchott, K.; Fu, P.; Selbig, J.; Eigenbrod, S.; Tonn, J. C.; Schichor, C.: Isolation and Characterization of Bone Marrow-derived Progenitor Cells from Malignant Gliomas. Anticancer Research 32 (11), pp. 4971 - 4982 (2012)
83.
Journal Article
Gupta, K. J.; Shah, J. K.; Brotman, Y.; Jahnke, K.; Willmitzer, L.; Kaiser, W. M.; Bauwe, H.; Igamberdiev, A. U.: Inhibition of aconitase by nitric oxide leads to induction of the alternative oxidase and to a shift of metabolism towards biosynthesis of amino acids. Journal of Experimental Botany 63 (4), pp. 1773 - 1784 (2012)
84.
Journal Article
Hackenberg, C.; Huege, J.; Engelhardt, A.; Wittink, F.; Laue, M.; Matthijs, H. C.; Kopka, J.; Bauwe, H.; Hagemann, M.: Low-carbon acclimation in carboxysome-less and photorespiratory mutants of the cyanobacterium Synechocystis sp. strain PCC 6803. Microbiology 158 (Pt 2), pp. 398 - 413 (2012)
85.
Journal Article
Haedrich, N.; Hendriks, J. H.; Koetting, O.; Arrivault, S.; Feil, R.; Zeeman, S. C.; Gibon, Y.; Schulze, W. X.; Stitt, M.; Lunn, J. E.: Mutagenesis of cysteine 81 prevents dimerization of the APS1 subunit of ADP-glucose pyrophosphorylase and alters diurnal starch turnover in Arabidopsis thaliana leaves. Plant Journal 70 (2), pp. 231 - 242 (2012)
86.
Journal Article
Hartmann, S.; Helm, C.; Nickel, B.; Meyer, M.; Struck, T. H.; Tiedemann, R.; Selbig, J.; Bleidorn, C.: Exploiting Gene Families for Phylogenomic Analysis of Myzostomid Transcriptome Data. PLoS One 7 (1), p. e29843 (2012)
87.
Journal Article
Hebbelmann, I.; Selinski, J.; Wehmeyer, C.; Goss, T.; Voss, I.; Mulo, P.; Kangasjarvi, S.; Aro, E.-M.; Oelze, M. L.; Dietz, K. J. et al.; Nunes-Nesi, A.; Do, P. T.; Fernie, A. R.; Talla, S. K.; Raghavendra, A. S.; Linke, V.; Scheibe, R.: Multiple strategies to prevent oxidative stress in Arabidopsis plants lacking the malate valve enzyme NADP-malate dehydrogenase. Journal of Experimental Botany 63 (3), pp. 1445 - 1459 (2012)
88.
Journal Article
Hehenberger, E.; Kradolfer, D.; Köhler, C.: Endosperm cellularization defines an important developmental transition for embryo development. Development 139 (11), pp. 2031 - 2039 (2012)
89.
Journal Article
Hincha, D. K.; Thalhammer, A.: LEA proteins: IDPs with versatile functions in cellular dehydration tolerance. Biochemical Society Transactions 40 (5), pp. 1000 - 1003 (2012)
90.
Journal Article
Hische, M.; Larhlimi, A.; Schwarz, F.; Fischer-Rosinsky, A.; Bobbert, T.; Assmann, A.; Catchpole, G. S.; Pfeiffer, A. F.; Willmitzer, L.; Selbig, J. et al.; Spranger, J.: A distinct metabolic signature predicts development of fasting plasma glucose. Journal of Clinical Bioinformatics 2 (1), p. 3 (2012)
91.
Journal Article
Houba-Hérin, N.; Hennig, L.; Köhler, C.; Gaudin, V.: A fruitful chromatin harvest: Meeting summary of the Second European Workshop on Plant Chromatin 2011 in Versailles, France. Epigenetics 7 (3), pp. 307 - 311 (2012)
92.
Journal Article
Hubberten, H. M.; Drozd, A.; Tran, B. V.; Hesse, H.; Hoefgen, R.: Local and systemic regulation of sulfur homeostasis in roots of Arabidopsis thaliana. Plant Journal 72 (4), pp. 625 - 635 (2012)
93.
Journal Article
Hubberten, H.-M.; Klie, S.; Caldana, C.; Degenkolbe, T.; Willmitzer, L.; Hoefgen, R.: An additional role of O-acetylserine as a sulphur status independent regulator during plant growth. Plant Journal 70 (4), pp. 666 - 677 (2012)
94.
Journal Article
Huber, A.; Koch, J.; Kragler, F.; Brocard, C.; Hartig, A.: A Subtle Interplay Between Three Pex11 Proteins Shapes De Novo Formation and Fission of Peroxisomes. Traffic 13 (1), pp. 157 - 167 (2012)
95.
Journal Article
Hundertmark, M.; Popova, A. V.; Rausch, S.; Seckler, R.; Hincha, D. K.: Influence of drying on the secondary structure of intrinsically disordered and globular proteins. Biochemical and Biophysical Research Communications 417 (1), pp. 122 - 128 (2012)
96.
Journal Article
Jiang, H.; Köhler, C.: Evolution, function, and regulation of genomic imprinting in plant seed development. Journal of Experimental Botany 63 (13), pp. 4713 - 4722 (2012)
97.
Journal Article
Johnson, M. T.; Carpenter, E. J.; Tian, Z.; Bruskiewich, R.; Burris, J. N.; Carrigan, C. T.; Chase, M. W.; Clarke, N. D.; Covshoff, S.; Depamphilis, C. W. et al.; Edger, P. P.; Goh, F.; Graham, S.; Greiner, S.; Hibberd, J. M.; Jordon-Thaden, I.; Kutchan, T. M.; Leebens-Mack, J.; Melkonian, M.; Miles, N.; Myburg, H.; Patterson, J.; Pires, J. C.; Ralph, P.; Rolf, M.; Sage, R. F.; Soltis, D.; Soltis, P.; Stevenson, D.; Stewart, C. N.,. J.; Surek, B.; Thomsen, C. J.; Villarreal, J. C.; Wu, X.; Zhang, Y.; Deyholos, M. K.; Wong, G. K.: Evaluating methods for isolating total RNA and predicting the success of sequencing phylogenetically diverse plant transcriptomes. PLoS One 7 (11), p. e50226 (2012)
98.
Journal Article
Karojet, S.; Kunz, S.; van Dongen, J. T.: Microbacterium yannicii sp. nov., isolated from Arabidopsis thaliana roots. International Journal of Systematic and Evolutionary Microbiology 62 (Pt 4), pp. 822 - 826 (2012)
99.
Journal Article
Keren, I.; Tal, L.; des Francs-Small, C. C.; Araujo, W. L.; Shevtsov, S.; Shaya, F.; Fernie, A. R.; Small, I.; Ostersetzer-Biran, O.: nMAT1, a nuclear-encoded maturase involved in the trans-splicing of nad1 intron 1, is essential for mitochondrial complex I assembly and function. The Plant Journal 71 (3), pp. 413 - 426 (2012)
100.
Journal Article
Kirma, M.; Araujo, W. L.; Fernie, A. R.; Galili, G.: The multifaceted role of aspartate-family amino acids in plant metabolism. Journal of Experimental Botany 63 (14), pp. 4995 - 5001 (2012)
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