Journal Article (174)

51.
Journal Article
Hische, M.; Luis-Dominguez, O.; Pfeiffer, A. F. H.; Schwarz, P. E.; Selbig, J.; Spranger, J.: Decision trees as a simple-to-use and reliable tool to identify individuals with impaired glucose metabolism or type 2 diabetes mellitus. European Journal of Endocrinology 163 (4), pp. 565 - 571 (2010)
52.
Journal Article
Hofmann, J.; El Ashry, A.; Anwar, S.; Erban, A.; Kopka, J.; Grundler, F.: Metabolic profiling reveals local and systemic responses of host plants to nematode parasitism. Plant Journal 62 (6), pp. 1058 - 1071 (2010)
53.
Journal Article
Huang, T. F.; Tohge, T.; Lytovchenko, A.; Fernie, A. R.; Jander, G.: Pleiotropic physiological consequences of feedback-insensitive phenylalanine biosynthesis in Arabidopsis thaliana. The Plant Journal 63 (5), pp. 823 - 835 (2010)
54.
Journal Article
Hummel, I.; Pantin, F.; Sulpice, R.; Piques, M.; Rolland, G.; Dauzat, M.; Christophe, A.; Pervent, M.; Bouteille, M.; Stitt, M. et al.; Gibon, Y.; Muller, B.: Arabidopsis Plants Acclimate to Water Deficit at Low Cost through Changes of Carbon Usage: An Integrated Perspective Using Growth, Metabolite, Enzyme, and Gene Expression Analysis. Plant Physiology 154 (1), pp. 357 - 372 (2010)
55.
Journal Article
Hummel, J.; Strehmel, N.; Selbig, J.; Walther, D.; Kopka, J.: Decision tree supported substructure prediction of metabolites from GC-MS profiles. Metabolomics 6 (2), pp. 322 - 333 (2010)
56.
Journal Article
Jozefczuk, S.; Klie, S.; Catchpole, G.; Szymanski, J.; Cuadros-Inostroza, A.; Steinhauser, D.; Selbig, J.; Willmitzer, L.: Metabolomic and transcriptomic stress response of Escherichia coli. Molecular Systems Biology 6, p. 364 (2010)
57.
Journal Article
Kaida, R.; Serada, S.; Norioka, N.; Norioka, S.; Neumetzler, L.; Pauly, M.; Sampedro, J.; Zarra, I.; Hayashi, T.; Kaneko, T. S.: Potential Role for Purple Acid Phosphatase in the Dephosphorylation of Wall Proteins in Tobacco Cells. Plant Physiology 153 (2), pp. 603 - 610 (2010)
58.
Journal Article
Kamenetzky, L.; Asis, R.; Bassi, S.; de Godoy, F.; Bermudez, L.; Fernie, A. R.; van Sluys, M. A.; Vrebalov, J.; Giovannoni, J. J.; Rossi, M. et al.; Carrari, F.: Genomic Analysis of Wild Tomato Introgressions Determining Metabolism- and Yield-Associated Traits. Plant Physiology 152 (4), pp. 1772 - 1786 (2010)
59.
Journal Article
Katzmann, E.; Scheffel, A.; Gruska, M.; Plitzko, J. M.; Schueler, D.: Loss of the actin-like protein MamK has pleiotropic effects on magnetosome formation and chain assembly in Magnetospirillum gryphiswaldense. Molecular Microbiology 77 (1), pp. 208 - 224 (2010)
60.
Journal Article
Keinath, N. F.; Kierszniowska, S.; Lorek, J.; Bourdais, G.; Kessler, S. A.; Shimosato-Asano, H.; Grossniklaus, U.; Schulze, W. X.; Robatzek, S.; Panstruga, R.: PAMP (pathogen-associated molecular pattern)-induced changes in plasma membrane compartmentalization reveal novel components of plant immunity. Journal of Biological Chemistry 285 (50), pp. 39140 - 39149 (2010)
61.
Journal Article
Klie, S.; Nikoloski, Z.; Selbig, J.: Biological Cluster Evaluation for Gene Function Prediction. Journal of Computational Biology 17, pp. 1 - 18 (2010)
62.
Journal Article
Koch, J.; Pranjic, K.; Huber, A.; Ellinger, A.; Hartig, A.; Kragler, F.; Brocard, C.: PEX11 family members are membrane elongation factors that coordinate peroxisome proliferation and maintenance. Journal of Cell Science 123 (Pt 19), pp. 3389 - 3400 (2010)
63.
Journal Article
Koehl, K. I.; Gremmels, J.: Documentation system for plant transformation service and research. Plant Methods 6, p. 4 (2010)
64.
Journal Article
Korn, M.; Gärtner, T.; Erban, A.; Kopka, J.; Selbig, J.; Hincha, D. K.: Predicting Arabidopsis Freezing Tolerance and Heterosis in Freezing Tolerance from Metabolite Composition. Molecular Plant 3 (1), pp. 224 - 235 (2010)
65.
Journal Article
Kragler, F.: RNA in the phloem: A crisis or a return on investment? PLANT SCIENCE 178 (2), pp. 99 - 104 (2010)
66.
Journal Article
Krebs, J.; Mueller-Roeber, B.; Ruzicic, S.: A novel bipartite nuclear localization signal with an atypically long linker in DOF transcription factors. Journal of Plant Physiology 167 (7), pp. 583 - 586 (2010)
67.
Journal Article
Krueger, S.; Donath, A.; Lopez-Martin, M. C.; Hoefgen, R.; Gotor, C.; Hesse, H.: Impact of sulfur starvation on cysteine biosynthesis in T-DNA mutants deficient for compartment-specific serine-acetyltransferase. Amino Acids 39 (4), pp. 1029 - 1042 (2010)
68.
Journal Article
Laitinen, R. A.; Schneeberger, K.; Jelly, N. S.; Ossowski, S.; Weigel, D.: Identification of a spontaneous frame shift mutation in a nonreference Arabidopsis accession using whole genome sequencing. Plant Physiology 153 (2), pp. 652 - 654 (2010)
69.
Journal Article
Lang, D.; Weiche, B.; Timmerhaus, G.; Richardt, S.; Riano-Pachon, D. M.; Correa, L. G. G.; Reski, R.; Mueller-Roeber, B.; Rensing, S. A.: Genome-Wide Phylogenetic Comparative Analysis of Plant Transcriptional Regulation: A Timeline of Loss, Gain, Expansion, and Correlation with Complexity. Genome Biology and Evolution 2, pp. 488 - 503 (2010)
70.
Journal Article
Lerch, O.: Clean in GC/MS. Nachrichten aus der Chemie 58 (7-8), pp. 782 - 783 (2010)
71.
Journal Article
Leuendorf, J. E.; Osorio, S.; Szewczyk, A.; Fernie, A. R.; Hellmann, H.: Complex Assembly and Metabolic Profiling of Arabidopsis thaliana Plants Overexpressing Vitamin B(6) Biosynthesis Proteins. Molecular Plant 3 (5), pp. 890 - 903 (2010)
72.
Journal Article
Lewandowska, M.; Wawrzynska, A.; Moniuszko, G.; Lukomska, J.; Zientara, K.; Piecho, M.; Hodurek, P.; Zhukov, I.; Liszewska, F.; Nikiforova, V. et al.; Sirko, A.: A Contribution to Identification of Novel Regulators of Plant Response to Sulfur Deficiency: Characteristics of a Tobacco Gene UP9C, Its Protein Product and the Effects of UP9C Silencing. Molecular Plant 3 (2), pp. 347 - 360 (2010)
73.
Journal Article
Licausi, F.; Giorgi, F. M.; Zenoni, S.; Osti, F.; Pezzotti, M.; Perata, P.: Genomic and transcriptomic analysis of the AP2/ERF superfamily in Vitis vinifera. BMC Genomics 11, p. 719 (2010)
74.
Journal Article
Licausi, F.; van Dongen, J. T.; Giuntoli, B.; Novi, G.; Santaniello, A.; Geigenberger, P.; Perata, P.: HRE1 and HRE2, two hypoxia-inducible ethylene response factors, affect anaerobic responses in Arabidopsis thaliana. Plant Journal 62 (2), pp. 302 - 315 (2010)
75.
Journal Article
Lohse, M.; Nunes-Nesi, A.; Krueger, P.; Nagel, A.; Hannemann, J.; Giorgi, F. M.; Childs, L.; Osorio, S.; Walther, D.; Selbig, J. et al.; Sreenivasulu, N.; Stitt, M.; Fernie, A. R.; Usadel, B.: Robin: An Intuitive Wizard Application for R-Based Expression Microarray Quality Assessment and Analysis. Plant Physiology 153 (2), pp. 642 - 651 (2010)
76.
Journal Article
Lugan, R.; Niogret, M. F.; Leport, L.; Guegan, J. P.; Larher, F. R.; Savoure, A.; Kopka, J.; Bouchereau, A.: Metabolome and water homeostasis analysis of Thellungiella salsuginea suggests that dehydration tolerance is a key response to osmotic stress in this halophyte. Plant Journal 64 (2), pp. 215 - 229 (2010)
77.
Journal Article
Madrid, E.; Gil, J.; Rubiales, D.; Krajinski, F.; Schlereth, A.; Millan, T.: Transcription factor profiling leading to the identification of putative transcription factors involved in the Medicago truncatula-Uromyces striatus interaction. Theoretical and Applied Genetics 121 (7), pp. 1311 - 1321 (2010)
78.
Journal Article
Malanin, S. Y.; Nikiforova, V. Y.: A link between alternative splicing and nonsense-mediated mRNA decay in the control of THIC gene expression in arabidopsis. Russian Journal of Plant Physiology 57 (2), pp. 267 - 272 (2010)
79.
Journal Article
Maloney, G. S.; Kochevenko, A.; Tieman, D. M.; Tohge, T.; Krieger, U.; Zamir, D.; Taylor, M. G.; Fernie, A. R.; Klee, H. J.: Characterization of the Branched-Chain Amino Acid Aminotransferase Enzyme Family in Tomato. Plant Physiology 153 (3), pp. 925 - 936 (2010)
80.
Journal Article
Massonnet, C.; Vile, D.; Fabre, J.; Hannah, M. A.; Caldana, C.; Lisec, J.; Beemster, G. T. S.; Meyer, R. C.; Messerli, G.; Gronlund, J. T. et al.; Perkovic, J.; Wigmore, E.; May, S.; Bevan, M. W.; Meyer, C.; Rubio-Diaz, S.; Weigel, D.; Micol, J. L.; Buchanan-Wollaston, V.; Fiorani, F.; Walsh, S.; Rinn, B.; Gruissem, W.; Hilson, P.; Hennig, L.; Willmitzer, L.; Granier, C.: Probing the Reproducibility of Leaf Growth and Molecular Phenotypes: A Comparison of Three Arabidopsis Accessions Cultivated in Ten Laboratories. Plant Physiology 152 (4), pp. 2142 - 2157 (2010)
81.
Journal Article
Mathieu-Rivet, E.; Gevaudant, F.; Sicard, A.; Salar, S.; Do, P. T.; Mouras, A.; Fernie, A. R.; Gibon, Y.; Rothan, C.; Chevalier, C. et al.; Hernould, M.: Functional analysis of the anaphase promoting complex activator CCS52A highlights the crucial role of endo-reduplication for fruit growth in tomato. The Plant Journal 62 (5), pp. 727 - 741 (2010)
82.
Journal Article
May, P.; Kreuchwig, A.; Steinke, T.; Koch, I.: PTGL: a database for secondary structure-based protein topologies. Nucleic Acids Research 38 (Database issue), pp. D326 - D330 (2010)
83.
Journal Article
Meinecke, L.; Alawady, A.; Schroda, M.; Willows, R.; Kobayashi, M. C.; Niyogi, K. K.; Grimm, B.; Beck, C. F.: Chlorophyll-deficient mutants of Chlamydomonas reinhardtii that accumulate magnesium protoporphyrin IX. Plant Molecular Biology 72 (6), pp. 643 - 658 (2010)
84.
Journal Article
Meyer, R. C.; Kusterer, B.; Lisec, J.; Steinfath, M.; Becher, M.; Scharr, H.; Melchinger, A. E.; Selbig, J.; Schurr, U.; Willmitzer, L. et al.; Altmann, T.: QTL analysis of early stage heterosis for biomass in Arabidopsis. Theoretical and Applied Genetics 120 (2), pp. 227 - 237 (2010)
85.
Journal Article
Meyer, S.; De Angeli, A.; Fernie, A. R.; Martinoia, E.: Intra- and extra-cellular excretion of carboxylates. Trends in Plant Science 15 (1), pp. 40 - 47 (2010)
86.
Journal Article
Muessig, C.; Schroeder, F.; Usadel, B.; Lisso, J.: Structure and putative function of NFX1-like proteins in plants. Plant Biology 12 (3), pp. 381 - 394 (2010)
87.
Journal Article
Munoz-Bertomeu, J.; Cascales-Minana, B.; Irles-Segura, A.; Mateu, I.; Nunes-Nesi, A.; Fernie, A. R.; Segura, J.; Ros, R.: The Plastidial Glyceraldehyde-3-Phosphate Dehydrogenase Is Critical for Viable Pollen Development in Arabidopsis. Plant Physiology 152 (4), pp. 1830 - 1841 (2010)
88.
Journal Article
Mutwil, M.; Usadel, B.; Schuette, M.; Loraine, A.; Ebenhoeh, O.; Persson, S.: Assembly of an Interactive Correlation Network for the Arabidopsis Genome Using a Novel Heuristic Clustering Algorithm. Plant Physiology 152 (1), pp. 29 - 43 (2010)
89.
Journal Article
Nashilevitz, S.; Melamed-Bessudo, C.; Izkovich, Y.; Rogachev, I.; Osorio, S.; Itkin, M.; Adato, A.; Pankratov, I.; Hirschberg, J.; Fernie, A. R. et al.; Wolf, S.; Usadel, B.; Levy, A. A.; Rumeau, D.; Aharoni, A.: An Orange Ripening Mutant Links Plastid NAD(P)H Dehydrogenase Complex Activity to Central and Specialized Metabolism during Tomato Fruit Maturation. The Plant Cell 22 (6), pp. 1977 - 1997 (2010)
90.
Journal Article
Nikoloski, Z.; May, P.; Selbig, J.: Algebraic connectivity may explain the evolution of gene regulatory networks. Journal of Theoretical Biology 267 (1), pp. 7 - 14 (2010)
91.
Journal Article
Nordhues, A.; Miller, S. M.; Muehlhaus, T.; Schroda, M.: New Insights into the Roles of Molecular Chaperones in Chlamydomonas and Volvox. International Review of Cell and Molecular Biology 285, pp. 75 - 113 (2010)
92.
Journal Article
Nunes-Nesi, A.; Fernie, A. R.; Stitt, M.: Metabolic and signaling aspects underpinning the regulation of plant carbon nitrogen interactions. Molecular Plant 3 (6), pp. 973 - 996 (2010)
93.
Journal Article
Parent, B.; Turc, O.; Gibon, Y.; Stitt, M.; Tardieu, F.: Modelling temperature-compensated physiological rates, based on the co-ordination of responses to temperature of developmental processes. Journal of Experimental Botany 61 (8), pp. 2057 - 2069 (2010)
94.
Journal Article
Parveen, I.; Moorby, J. M.; Fraser, M. D.; Erban, A.; Kopka, J.: Relationship between Grazing Lamb Growth Rate and Blood Plasma Analytes as Profiled by Gas Chromatography with Time-of-Flight Mass Spectrometry (GC-TOF/MS). Journal of Agricultural and Food Chemistry 58 (2), pp. 913 - 917 (2010)
95.
Journal Article
Peluffo, L.; Lia, V.; Troglia, C.; Maringolo, C.; Norma, P.; Escande, A.; Hopp, H. E.; Lytovchenko, A.; Fernie, A. R.; Heinz, R. et al.; Carrari, F.: Metabolic profiles of sunflower genotypes with contrasting response to Sclerotinia sclerotiorum infection. Phytochemistry 71 (1), pp. 70 - 80 (2010)
96.
Journal Article
Perez-Rodriguez, P.; Riano-Pachon, D. M.; Correa, L. G. G.; Rensing, S. A.; Kersten, B.; Mueller-Roeber, B.: PInTFDB: updated content and new features of the plant transcription factor database. Nucleic Acids Research 38, pp. D822 - D827 (2010)
97.
Journal Article
Phuc, T. D.; Prudent, M.; Sulpice, R.; Causse, M.; Fernie, A. R.: The Influence of Fruit Load on the Tomato Pericarp Metabolome in a Solanum chmielewskii Introgression Line Population. Plant Physiology 154 (3), pp. 1128 - 1142 (2010)
98.
Journal Article
Pracharoenwattana, I.; Zhou, W. X.; Keech, O.; Francisco, P. B.; Udomchalothorn, T.; Tschoep, H.; Stitt, M.; Gibon, Y.; Smith, S. M.: Arabidopsis has a cytosolic fumarase required for the massive allocation of photosynthate into fumaric acid and for rapid plant growth on high nitrogen. Plant Journal 62 (5), pp. 785 - 795 (2010)
99.
Journal Article
Preuten, T.; Cincu, E.; Fuchs, J.; Zoschke, R.; Liere, K.; Boerner, T.: Fewer genes than organelles: extremely low and variable gene copy numbers in mitochondria of somatic plant cells. The Plant Journal 64 (6), pp. 948 - 959 (2010)
100.
Journal Article
Radchuk, R.; Conrad, U.; Saalbach, I.; Giersberg, M.; Emery, R. J. N.; Kuester, H.; Nunes-Nesi, A.; Fernie, A. R.; Weschke, W.; Weber, H.: Abscisic acid deficiency of developing pea embryos achieved by immunomodulation attenuates developmental phase transition and storage metabolism. The Plant Journal 64 (5), pp. 715 - 730 (2010)
Go to Editor View