All Publications

Film (6)

4851.

Film

Saplaoura, E.; Perrera, V.; Kragler, F.: Methylated RNA Immunoprecipitation Assay to Study m5C Modification in Arabidopsis. (2020)

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4852.

Film

Wang, Y.; Sampathkumar, A.: Live Cell Imaging of Microtubule Cytoskeleton and Micromechanical Manipulation of the Arabidopsis Shoot Apical Meristem. (2020)

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4853.

Film

Mubeen, U.; Giraldi, L.A.; Jueppner, J.; Giavalisco, P.: A Multi-Omics Extraction Method for the In-Depth Analysis of Synchronized Cultures of the Green Alga Chlamydomonas reinhardtii. (2019)

MPG.PuRe

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4854.

Film

Luzarowski, M.; Wojciechowska, I.; Skirycz, A.: 2 in 1: One-step Affinity Purification for the Parallel Analysis of Protein-Protein and Protein-Metabolite Complexes. (2018)

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DOI

Full

4855.

Film

Salem, M.A.; Bernach, M.; Bajdzienko, K.; Giavalisco, P.: A Simple Fractionated Extraction Method for the Comprehensive Analysis of Metabolites, Lipids, and Proteins from a Single Sample. (2017)

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4856.

Film

Stitt, M.: How Do Plants Regulate Their Behavior Based on Their Carbohydrate Resources? (2017)

MPG.PuRe

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Review Article (436)

4857.

Review Article

Yu, Y.; Fotopoulos, V.; Zhou, K.; Fernie, A. R.: The role of gasotransmitter hydrogen sulfide in plant cadmium stress responses. Trends in Plant Science 30 (1), pp. 35 - 53 (2025)

MPG.PuRe

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4858.

Review Article

Bulut, M.: Chemodiversity of sulfur-containing metabolites emphasizing the ecophysiology of Allium plants and the developmental innovations in bulb formation. Current Opinion in Plant Biology 85, 102724 (2025)

MPG.PuRe

DOI

4859.

Review Article

Lachica, M.K.E.; Watanabe, M.; Kanaya, S.; Fernie, A. R.; Tohge, T.: Prospects for functional genomics of genes involved in coffee-specialized metabolism through cross-species integrative omics. Current Opinion in Plant Biology 85, 102729 (2025)

MPG.PuRe

DOI

4860.

Review Article

Barreto, P.; Feitosa-Araujo, E.; Fernie, A. R.; Schwarzländer, M.: How to turbo charge respiration – thermogenic metabolism in plants. Current Opinion in Plant Biology 85, 102730 (2025)

MPG.PuRe

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4861.

Review Article

Cao, Y.; Chen, Q.; Xu, X.; Fernie, A. R.; Li, J.; Zhang, Y.: Insights from natural rubber biosynthesis evolution for pathway engineering. Trends in Plant Science (2025)

MPG.PuRe

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4862.

Review Article

Fettke, J.; Fernie, A. R.: Do storage reserves contribute to plant phenotypic plasticity? Trends in Plant Science 30 (4), pp. 364 - 372 (2025)

MPG.PuRe

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4863.

Review Article

Nievergelt, A. P.: Genome editing in the green alga Chlamydomonas: past, present practice and future prospects. The Plant Journal 122 (1), e70140 (2025)

MPG.PuRe

DOI

4864.

Review Article

Qin, K.; Ye, X.; Luo, S.; Fernie, A. R.; Zhang, Y.: Engineering carbon assimilation in plants. Journal of Integrative Plant Biology 67 (4), pp. 926 - 948 (2025)

MPG.PuRe

DOI

4865.

Review Article

Arend, M.; Paulitz, E.; Hsieh, Y.; Nikoloski, Z.: Scaling metabolic model reconstruction up to the pan-genome level: A systematic review and prospective applications to photosynthetic organisms. Metabolic Engineering 90, pp. 67 - 77 (2025)

MPG.PuRe

DOI

4866.

Review Article

Bulut, M.; Karakas, E.; Fernie, A. R.: Metabolic responses to multi-stress: An update. Plant Stress 15, 100729 (2025)

MPG.PuRe

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4867.

Review Article

Bulut, M.; Karakas, E.; Fernie, A. R.: Adjustments of plant primary metabolism in the face of climate change. Journal of Experimental Botany, eraf116 (2025)

MPG.PuRe

DOI

4868.

Review Article

de Oliveira, H.O.; Siqueira, J.A.; Medeiros, D.B.; Fernie, A. R.; Nunes-Nesi, A.; Araújo, W.L.: Harnessing the dynamics of plant organic acids metabolism following abiotic stresses. Plant Physiology and Biochemistry 220, 109465 (2025)

MPG.PuRe

DOI

4869.

Review Article

Jahan, T.; Huda, M.N.; Zhang, K.; He, Y.; Lai, D.; Dhami, N.; Quinet, M.; Ali, M.A.; Kreft, I.; Woo, S.-H. et al.; Georgiev, M.I.; Fernie, A. R.; Zhou, M.: Plant secondary metabolites against biotic stresses for sustainable crop protection. Biotechnology Advances 79, 108520 (2025)

MPG.PuRe

DOI

4870.

Review Article

Marzban, N.; Psarianos, M.; Herrmann, C.; Schulz-Nielsen, L.; Olszewska-Widdrat, A.; Arefi, A.; Pecenka, R.; Grundmann, P.; Schlüter, O. K.; Hoffmann, T. et al.; Rotter, V. S.; Nikoloski, Z.; Sturm, B.: Smart integrated biorefineries in bioeconomy: A concept toward zero-waste, emission reduction, and self-sufficient energy production. Biofuel Research Journal 12 (1), pp. 2319 - 2349 (2025)

MPG.PuRe

DOI

4871.

Review Article

Zhao, Z.; Fernie, A. R.; Zhang, Y.: Engineering nitrogen and carbon fixation for next-generation plants. Current Opinion in Plant Biology 85, 102699 (2025)

MPG.PuRe

DOI

4872.

Review Article

Liu, H.-J.; Liu, J.; Zhai, Z.; Dai, M.; Tian, F.; Wu, Y.; Tang, J.; Lu, Y.; Wang, H.; Jackson, D. et al.; Yang, X.; Qin, F.; Xu, M.; Fernie, A. R.; Zhang, Z.; Yan, J.: Maize2035: A decadal vision for intelligent maize breeding. Molecular Plant 18 (2), pp. 313 - 332 (2025)

MPG.PuRe

DOI

4873.

Review Article

Petersen, M.; Avin-Wittenberg, T.; Bassham, D. C.; Dagdas, Y.; Fan, C.; Fernie, A. R.; Jiang, L.; Mishra, D.; Otegui, M. S.; Rodriguez, E. et al.; Hofius, D.: Autophagy in plants. Autophagy Reports 3 (1), 2395731 (2024)

MPG.PuRe

DOI

4874.

Review Article

Sartagoda, K.J.D.; Tiozon, R. J. N.; Sreenivasulu, N.: Cereal-based proteins: Bridging health, sustainability, and future innovations for food industries. Journal of Food Composition and Analysis 136, 106720 (2024)

MPG.PuRe

DOI

4875.

Review Article

Tiozon, R. J. N.; Lenaerts, B.; Kor, S.; Demont, M.; Fernie, A. R.; Sreenivasulu, N.: Low glycemic index rice: a healthier diet for countering diabetes epidemic in Asia. Trends in Plant Science (2024)

MPG.PuRe

DOI

4876.

Review Article

Ye, X.; Qin, K.; Fernie, A. R.; Zhang, Y.: Prospects for synthetic biology in 21st Century agriculture. International Journal of Genetics and Genomics (2024)

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4877.

Review Article

de Vries, J.; de Vries, S.; Fernie, A. R.: Current and future perspectives for enhancing our understanding of the evolution of plant metabolism. Philosophical Transactions B 379 (1914), 20240253 (2024)

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4878.

Review Article

Delaux, P.; Gutjahr, C.: Evolution of small molecule-mediated regulation of arbuscular mycorrhiza symbiosis. Philosophical Transactions B 379 (1914), 20230369 (2024)

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4879.

Review Article

Fernie, A. R.; de Vries, S.; de Vries, J.: Evolution of plant metabolism: the state-of-the-art. Philosophical Transactions of the Royal Society of London, Series B: Biological Sciences 379 (1914), 20230347 (2024)

MPG.PuRe

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4880.

Review Article

Fernie, A. R.; Liu, F.; Zhang, Y.: Post-genomic illumination of paclitaxel biosynthesis. Nature Plants 10, pp. 1875 - 1885 (2024)

MPG.PuRe

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4881.

Review Article

Sun, Y.; Yuan, H.; Fernie, A. R.: Harnessing plant-associated microorganism to alleviate the detrimental effects of environmental abiotic stresses on medicinal plants. Medicinal Plant Biology 3, e024 (2024)

MPG.PuRe

DOI

4882.

Review Article

Eckardt, N. A.; Bock, R.; Croce, R.; Lagarias, J. C.; Merchant, S.; Redding, K.: Focus on Photosynthesis. The Plant Cell 36 (10), pp. 3895 - 3896 (2024)

MPG.PuRe

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4883.

Review Article

Lima, R. B.; Figueiredo, D.D.: Sex on steroids: how brassinosteroids shape reproductive development in plants. Plant and Cell Physiology 65 (10), pp. 1581 - 1600 (2024)

MPG.PuRe

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4884.

Review Article

Rolo, D.; Schöttler, M. A.; Sandoval-Ibanez, O.; Bock, R.: Structure, function, and assembly of photosystem I in thylakoid membranes of vascular plants. The Plant Cell 36 (10), pp. 4080 - 4108 (2024)

MPG.PuRe

DOI

4885.

Review Article

Yu, Y.; Alseekh, S.; Zhu, Z.; Zhou , K.; Fernie, A. R.: Multiomics and biotechnologies for understanding and influencing cadmium accumulation and stress response in plants. Plant Biotechnology Journal 22 (10), pp. 2641 - 2659 (2024)

MPG.PuRe

DOI

4886.

Review Article

Yokoyama, R.: Evolution of aromatic amino acid metabolism in plants: a key driving force behind plant chemical diversity in aromatic natural products. Philosophical Transactions of the Royal Society of London, Series B: Biological Sciences 379 (1914), 20230352 (2024)

MPG.PuRe

DOI

4887.

Review Article

Fischer, H.D.; Fernie, A.; Skirycz, A.: Using protein–metabolite interactions to identify novel plant metabolite receptors. Phytochemistry Reviews (2024)

MPG.PuRe

DOI

4888.

Review Article

Ma, Z.; Hu, L.: WRKY Transcription Factor Responses and Tolerance to Abiotic Stresses in Plants. International Journal of Molecular Sciences 25 (13), 6845 (2024)

MPG.PuRe

DOI

4889.

Review Article

Qu, Y.; Fernie, A. R.; Liu, J.; Yan, J.: Doubled haploid technology and synthetic apomixis: Recent advances and applications in future crop breeding. Molecular Plant 17 (7), pp. 1005 - 1018 (2024)

MPG.PuRe

DOI

4890.

Review Article

Barro-Trastoy, D.; Köhler, C.: Helitrons: genomic parasites that generate developmental novelties. Trends in Genetics 40 (5), pp. 437 - 448 (2024)

MPG.PuRe

DOI

4891.

Review Article

Schwarzerova, J.; Hurta, M.; Barton, V.; Lexa, M.; Walther, D.; Provaznik, V.; Weckwerth, W.: A perspective on genetic and polygenic risk scores—advances and limitations and overview of associated tools. Briefings in Bioinformatics 25 (3), bbae240 (2024)

MPG.PuRe

DOI

4892.

Review Article

Sun, Y.; Fernie, A. R.: Plant secondary metabolism in a fluctuating world: climate change perspectives. Trends in Plant Science 29 (5), pp. 560 - 571 (2024)

MPG.PuRe

DOI

4893.

Review Article

Sedaghatmehr, M.; Balazadeh, S.: Autophagy: A Key Player in the Recovery of Plants from Heat Stress. Journal of Experimental Botany (8), pp. 2246 - 2255 (2024)

MPG.PuRe

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4894.

Review Article

Calderan-Rodrigues, M.J.; Caldana, C.: Impact of the TOR pathway on plant growth via cell wall remodeling. Journal of Plant Physiology 294, 154202 (2024)

MPG.PuRe

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4895.

Review Article

Clapero, V.; Arrivault, S.; Stitt, M.: Natural variation in metabolism of the Calvin-Benson cycle. Seminars in Cell & Developmental Biology 155 (Part A), pp. 23 - 36 (2024)

MPG.PuRe

DOI

4896.

Review Article

Ferreira, M.A.D.M.; Silveira, W.B.D.; Nikoloski, Z.: Protein constraints in genome-scale metabolic models: Data integration, parameter estimation, and prediction of metabolic phenotypes. Biotechnology and Bioengineering 121 (3), pp. 915 - 930 (2024)

MPG.PuRe

DOI

4897.

Review Article

Martinez Rivas, F.J.; Fernie, A. R.: Metabolomics to understand metabolic regulation underpinning fruit ripening, development, and quality. Journal of Experimental Botany 75 (6), pp. 1726 - 1740 (2024)

MPG.PuRe

DOI

4898.

Review Article

Yoshida, T.; Fernie, A. R.: Hormonal regulation of plant primary metabolism under drought. Journal of Experimental Botany 75 (6), pp. 1714 - 1725 (2024)

MPG.PuRe

DOI

4899.

Review Article

Artins, A.; Martins, M. C. M.; Meyer, C.; Fernie, A. R.; Caldana, C.: Sensing and regulation of C and N metabolism – novel features and mechanisms of the TOR and SnRK1 signaling pathways. The Plant Journal 118 (5), pp. 1268 - 1280 (2024)

MPG.PuRe

DOI

4900.

Review Article

Li, H.; Che, R.; Zhu, J.; Yang, X.; Li, J.; Fernie, A. R.; Yan, J.: Multi-omics-driven advances in the understanding of triacylglycerol biosynthesis in oil seeds. The Plant Journal 117 (4), pp. 999 - 1017 (2024)

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