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Journal Article (162)

1.
Journal Article
Aarabi, F.; Kusajima, M.; Tohge, T.; Konishi, T.; Gigolashvili, T.; Takamune, M.; Sasazaki, Y.; Watanabe, M.; Nakashita, H.; Fernie, A. R. et al.; Saito, K.; Takahashi, H.; Hubberten, H. M.; Hoefgen, R.; Maruyama-Nakashita, A.: Sulfur deficiency–induced repressor proteins optimize glucosinolate biosynthesis in plants. Science Advances 2 (10), e1601087 (2016)
2.
Journal Article
Addadi, L.; Gal, A.; Faivre, D.; Scheffel, A.; Weiner, S.: Control of Biogenic Nanocrystal Formation in Biomineralization. Israel Journal of Chemistry 56 (4 SI), pp. 227 - 241 (2016)
3.
Journal Article
Allu, A. D.; Brotman, Y.; Xue, G.; Balazadeh, S.: Transcription factor ANAC032 modulates JA/SA signalling in response to Pseudomonas syringae infection. EMBO Reports 17 (11), pp. 1499 - 1671 (2016)
4.
Journal Article
Alves de Castro, P.; dos Reis, T. F.; Dolan, S. K.; Oliveira Manfiolli, A.; Brown, N. A.; Jones, G. W.; Doyle, S.; Riaño-Pachón, D. M.; Squina, F. M.; Caldana, C. et al.; Singh, A.; Del Poeta, M.; Hagiwara, D.; Silva-Rocha, R.; Goldman, G. H.: The Aspergillus fumigatus SchASCH9 kinase modulates SakAHOG1 MAP kinase activity and it is essential for virulence. Molecular Microbiology 102 (4), pp. 642 - 671 (2016)
5.
Journal Article
Antonio, C.; Päpke, C.; Rocha, M.; Diab, H.; Limami, A. M.; Obata, T.; Fernie, A. R.; van Dongen, J.: Regulation of Primary Metabolism in Response to Low Oxygen Availability as Revealed by Carbon and Nitrogen Isotope Redistribution. Plant Physiology 170 (1), pp. 43 - 56 (2016)
6.
Journal Article
Aranda-Sicilia, M.N.; Aboukila, A.; Armbruster, U.; Cagnac, O.; Schumann, T.; Kunz, H.-H.; Jahns, P.; Rodríguez-Rosales, M.P.; Sze, H.; Venema, K.: Envelope K+/H+ antiporters AtKEA1 and AtKEA2 function in plastid development. Plant Physiology 172 (1), pp. 441 - 449 (2016)
7.
Journal Article
Armbruster, U.; Leonelli, L.; Correa Galvis, V.; Strand, D.; Quinn, E.H.; Jonikas, M.C.; Niyogi, K.K.: Regulation and levels of the thylakoid K+/H+ antiporter KEA3 shape the dynamic response of photosynthesis in fluctuating light. Plant and Cell Physiology 57 (7), pp. 1557 - 1567 (2016)
8.
Journal Article
Baetz, U.; Eisenach, C.; Tohge, T.; Martinoia, E.; De Angeli, A.: Vacuolar chloride fluxes impact ion content and distribution during early salinity stress. Plant Physiology 172 (2), pp. 1167 - 1181 (2016)
9.
Journal Article
Bar-Even, A.: Formate Assimilation: The Metabolic Architecture of Natural and Synthetic Pathways. Biochemistry 55 (28), pp. 3851 - 3863 (2016)
10.
Journal Article
Barahimipour, R.; Neupert, J.; Bock, R.: Efficient expression of nuclear transgenes in the green alga Chlamydomonas: synthesis of an HIV antigen and development of a new selectable marker. Plant Molecular Biology 90 (4-5), pp. 403 - 418 (2016)
11.
Journal Article
Basler, G.; Küken, A.; Fernie, A. R.; Nikoloski, Z.: Photorespiratory Bypasses Lead to Increased Growth in Arabidopsis thaliana: Are Predictions Consistent with Experimental Evidence? Frontiers in Bioengineering and Biotechnology 4, 31 (2016)
12.
Journal Article
Basler, G.; Nikoloski, Z.; Larhlimi, A.; Barabasi, A.-L.; Liu, Y.-Y.: Control of fluxes in metabolic networks. Genome Research 26 (7), pp. 956 - 968 (2016)
13.
Journal Article
Bechtold, U.; Penfold, C. A.; Jenkins, D. J.; Legaie, R.; Moore, J. D.; Lawson, T.; Matthews, J. S. A.; Vialet-Chabrand, S. R. M.; Baxter, L.; Subramaniam, S. et al.; Hickman, R.; Florance, H.; Sambles, C.; Salmon, D. L.; Feil, R.; Bowden, L.; Hill, C.; Baker, N. R.; Lunn, J. E.; Finkenstaedt, B.; Mead, A.; Buchanan-Wollaston, V.; Beynon, J.; Rand, D. A.; Wild, D. L.; Denby, K. J.; Ott, S.; Smirnoff, N.; Mullineaux, P. M.: Time-Series Transcriptomics Reveals That AGAMOUS-LIKE22 Affects Primary Metabolism and Developmental Processes in Drought-Stressed Arabidopsis. The Plant Cell 28 (2), pp. 345 - 366 (2016)
14.
Journal Article
Beleggia, R.; Rau, D.; Laido, G.; Platani, C.; Nigro, F.; Fragasso, M.; De Vita, P.; Scossa, F.; Fernie, A. R.; Nikoloski, Z. et al.; Papa, R.: Evolutionary Metabolomics Reveals Domestication-Associated Changes in Tetraploid Wheat Kernels. Molecular Biology and Evolution 33 (7), pp. 1740 - 1753 (2016)
15.
Journal Article
Betti, M.; Bauwe, H.; Busch, F. A.; Fernie, A. R.; Keech, O.; Levey, M.; Ort, D. R.; Parry, M. A. J.; Sage, R.; Timm, S. et al.; Walker, B.; Weber, A. P. M.: Manipulating photorespiration to increase plant productivity: recent advances and perspectives for crop improvement. Journal of Experimental Botany 67 (10-SI), pp. 2977 - 2988 (2016)
16.
Journal Article
Brzezinka, K.; Altmann, S.; Czesnick, H.; Nicolas, P.; Gorka, M.; Benke, E.; Kabelitz, T.; Jähne, F.; Graf, A.; Kappel, C. et al.; Bäurle, I.: Arabidopsis FORGETTER1 mediates stress-induced chromatin memory through nucleosome remodeling. eLife 5 (September), e18246 (2016)
17.
Journal Article
Bunik, V.; Mkrtchyan, G.; Grabarska, A.; Oppermann, H.; Daloso, D. M.; Araujo, W. L.; Juszczak, M.; Rzeski, W.; Bettendorff, L.; Fernie, A. R. et al.; Meixensberger, J.; Stepulak, A.; Gaunitz, F.: Inhibition of mitochondrial 2-oxoglutarate dehydrogenase impairs viability of cancer cells in a cell-specific metabolism-dependent manner. Oncotarget 7 (18), pp. 26400 - 26421 (2016)
18.
Journal Article
Bustamante, C. A.; Monti, L. L.; Gabilondo, J.; Scossa, F.; Valentini, G.; Budde, C. O.; Lara, M. V.; Fernie, A. R.; Drincovich, M. F.: Differential Metabolic Rearrangements after Cold Storage Are Correlated with Chilling Injury Resistance of Peach Fruits. Frontiers in Plant Science 7, 1478 (2016)
19.
Journal Article
Coleto, I.; Trenas, A. T.; Erban, A.; Kopka, J.; Pineda, M.; Alamillo, J. M.: Functional specialization of one copy of glutamine phosphoribosyl pyrophosphate amidotransferase in ureide production from symbiotically fixed nitrogen in Phaseolus vulgaris. Plant, Cell and Environment 39 (8), pp. 1767 - 1779 (2016)
20.
Journal Article
Colinas, M.; Eisenhut, M.; Tohge, T.; Pesquera, M.; Fernie, A. R.; Weber, A. P. M.; Fitzpatrick, T. B.: Balancing of B-6 Vitamers Is Essential for Plant Development and Metabolism in Arabidopsis. The Plant Cell 28 (2), pp. 439 - 453 (2016)
21.
Journal Article
Coluccio Leskow, C.; Kamenetzky, L.; Guadalupe Dominguez, P.; Diaz Zirpolo, J. A.; Obata, T.; Costa, H.; Marti, M.; Taboga, O.; Keurentjes, J.; Sulpice, R. et al.; Ishihara, H.; Stitt, M.; Fernie, A. R.; Carrari, F.: Allelic differences in a vacuolar invertase affect Arabidopsis growth at early plant development. Journal of Experimental Botany 67 (14), pp. 4091 - 4103 (2016)
22.
Journal Article
Cookson, S. J.; Yadav, U. P.; Klie, S.; Morcuende, R.; Usadel, B.; Lunn, J. E.; Stitt, M.: Temporal kinetics of the transcriptional response to carbon depletion and sucrose readdition in Arabidopsis seedlings. Plant, Cell and Environment 39 (4), pp. 768 - 786 (2016)
23.
Journal Article
Cuadros-Inostroza, A. C.; Ruiz-Lara, S.; Gonzalez, E.; Eckardt, A.; Willmitzer, L.; Pena-Cortes, H.: GC-MS metabolic profiling of Cabernet Sauvignon and Merlot cultivars during grapevine berry development and network analysis reveals a stage- and cultivar-dependent connectivity of primary metabolites. Metabolomics 12 (2), 39 (2016)
24.
Journal Article
Czedik-Eysenberg, A.; Arrivault, S.; Lohse, M.A.; Feil, R.; Krohn, N.; Encke, B.; Nunes-Nesi, A.; Fernie, A. R.; Lunn, J. E.; Sulpice, R. et al.; Stitt, M.: The interplay between carbon availability and growth in different zones of the growing maize leaf. Plant Physiology 172 (2), pp. 943 - 967 (2016)
25.
Journal Article
Daloso, D. M.; dos Anjos, L.; Fernie, A. R.: Roles of sucrose in guard cell regulation. New Phytologist 211 (3), pp. 809 - 818 (2016)
26.
Journal Article
Daloso, D. M.; Williams, T. C. R.; Antunes, W. C.; Pinheiro, D. P.; Mueller, C.; Loureiro, M. E.; Fernie, A. R.: Guard cell-specific upregulation of sucrose synthase 3 reveals that the role of sucrose in stomatal function is primarily energetic. New Phytologist 209 (4), pp. 1470 - 1483 (2016)
27.
Journal Article
Davidia, D.; Noorb, E.; Liebermeisterc, W.; Bar-Even, A.; Flamholze, A.; Tummlerf, K.; Barenholza, U.; Goldenfelda, M.; Shlomig, T.; Miloa, R.: Global characterization of in vivo enzyme catalytic rates and their correspondence to in vitro k cat measurements. Proceedings of the National Academy of Sciences of the United States of America 113 (12), pp. 3401 - 3406 (2016)
28.
Journal Article
Davis, G. A.; Kanazawa, A.; Schöttler, M. A.; Kohzuma, K.; Froehlich, J. E.; Rutherford, A. W.; Satoh-Cruz, M.; Minhas, D.; Tietz, S.; Dhingra, A. et al.; Kramer, D. M.: Limitations to photosynthesis by proton motive force-induced photosystem II photodamage. eLife 5, e16921 (2016)
29.
Journal Article
de Michele, R.; McFarlane, H. E.; Parsons, H. T.; Meents, M. J.; Lao, J.; Fernandez-Nino, S. M. G.; Petzold, C. J.; Frommer, W. B.; Samuels, A. L.; Heazlewood, J. L.: Free-Flow Electrophoresis of Plasma Membrane Vesicles Enriched by Two-Phase Partitioning Enhances the Quality of the Proteome from Arabidopsis Seedlings. Journal of Proteome Research 15 (3), pp. 900 - 913 (2016)
30.
Journal Article
Del-Saz, N. F.; Florez-Sarasa, I. D.; Clemente-Moreno, M. J.; Mhadhbi, H.; Flexas, J.; Fernie, A. R.; Ribas-Carbó, M.: Salinity tolerance is related to cyanide-resistant alternative respiration in Medicago truncatula under sudden severe stress. Plant, Cell and Environment 39 (11), pp. 2361 - 2369 (2016)
31.
Journal Article
Dyson, B. C.; Miller, M. A.E.; Feil, R.; Rattray, N.; Bowsher, C. G.; Goodacre, R.; Lunn, J. E.; Johnson, G. N.: FUM2, a cytosolic fumarase, is essential for acclimation to low temperature in arabidopsis thaliana. Plant Physiology 172 (1), pp. 118 - 127 (2016)
32.
Journal Article
Edlich-Muth, C.; Muraya, M. M.; Altmann, T.; Selbig, J.: Phenomic prediction of maize hybrids. Biosystems 146, pp. 102 - 109 (2016)
33.
Journal Article
Eggert, E.; Obata, T.; Gerstenberger, A.; Gier, K.; Brandt, T.; Fernie, A. R.; Schulze, W. X.; Kühn, C.: A sucrose transporter-interacting protein disulphide isomerase affects redox homeostasis and links sucrose partitioning with abiotic stress tolerance. Plant, Cell and Environment 39 (6), pp. 1366 - 1380 (2016)
34.
Journal Article
Eloundou-Mbebi, J. M. O.; Küken, A.; Omranian, N.; Kleessen, S.; Neigenfind, J.; Basler, G.; Nikoloski, Z.: A network property necessary for concentration robustness. Nature Communications 7, 13255 (2016)
35.
Journal Article
Endler, A.; Schneider, R.; Kesten, C.; Lampugnani, E. R.; Persson, S.: The cellulose synthase companion proteins act non-redundantly with CELLULOSE SYNTHASE INTERACTING1/POM2 and CELLULOSE SYNTHASE 6. Plant Signaling & Behavior 11 (4), e1135281 (2016)
36.
Journal Article
Estevez, S.; Nikoloski, Z.: Metabolic Network Constrains Gene Regulation of C4 Photosynthesis: The Case of Maize. Plant & Cell Physiology 57 (5), pp. 933 - 943 (2016)
37.
Journal Article
Feike, D.; Seung, D.; Graf, A.; Bischof, S.; Ellick, T.; Coiro, M.; Soyk, S.; Eicke, S.; Mettler-Altmann, T.; Lu, K. J. et al.; Trick, M.; Zeeman, S. C.; Smith, A. M.: The Starch Granule-Associated Protein EARLY STARVATION1 Is Required for the Control of Starch Degradation in Arabidopsis thaliana Leaves. Plant Cell 28 (6), pp. 1472 - 1489 (2016)
38.
Journal Article
Figueroa, C. M.; Feil, R.; Ishihara, H.; Watanabe, M.; Kolling, K.; Krause, U.; Höhne, M.; Encke, B.; Plaxton, W. C.; Zeeman, S. C. et al.; Li, Z.; Schulze, W. X.; Hoefgen, R.; Stitt, M.; Lunn, J. E.: Trehalose 6-phosphate coordinates organic and amino acid metabolism with carbon availability. The Plant Journal 85 (3), pp. 410 - 423 (2016)
39.
Journal Article
Figueroa, C. M.; Lunn, J. E.: A tale of two sugars: Trehalose 6-phosphate and sucrose. Plant Physiology 172 (1), pp. 7 - 27 (2016)
40.
Journal Article
Filippou, P.; Antoniou, C.; Obata, T.; Van Der Kelen, K.; Harokopos, V.; Kanetis, L.; Aidinis, V.; Van Breusegem, F.; Fernie, A. R.; Fotopoulos, V.: Kresoxim-methyl primes Medicago truncatula plants against abiotic stress factors via altered reactive oxygen and nitrogen species signalling leading to downstream transcriptional and metabolic readjustment. Journal of Experimental Botany 67 (5), pp. 1259 - 1274 (2016)
41.
Journal Article
Flis, A.; Sulpice, R.; Seaton, D. D.; Ivakov, A.; Liput, M.; Abel, C.; Millar, A. J.; Stitt, M.: Photoperiod-dependent changes in the phase of core clock transcripts and global transcriptional outputs at dawn and dusk in Arabidopsis. Plant, Cell and Environment 39 (9), pp. 1955 - 1981 (2016)
42.
Journal Article
Florez-Sarasa, I. D.; Noguchi, K.; Araujo, W.; Garcia-Nogales, A.; Fernie, A. R.; Flexas, J.; Ribas-Carbo, M.: Impaired cyclic electron flow around Photosystem I disturbs high-light respiratory metabolism. Plant Physiology 172 (4), pp. 2176 - 2189 (2016)
43.
Journal Article
Florez-Sarasa, I. D.; Ribas-Carbo, M.; Fernandez Del-Saz, N.; Schwahn, K.; Nikoloski, Z.; Fernie, A. R.; Flexas, J.: Unravelling the invivo regulation and metabolic role of the alternative oxidase pathway in C-3 species under photoinhibitory conditions. New Phytologist 212 (1), pp. 66 - 79 (2016)
44.
Journal Article
Fuentes, P.; Zhou, F.; Erban, A.; Karcher, D.; Kopka, J.; Bock, R.: A new synthetic biology approach allows transfer of an entire metabolic pathway from a medicinal plant to a biomass crop. eLife 5, e13664 (2016)
45.
Journal Article
Gago, J.; Daloso, D. M.; Figueroa, C. M.; Flexas, J.; Fernie, A. R.; Nikoloski, Z.: Relationships of Leaf Net Photosynthesis, Stomatal Conductance, and Mesophyll Conductance to Primary Metabolism: A Multispecies Meta-Analysis Approach. Plant Physiology 171 (1), pp. 265 - 279 (2016)
46.
Journal Article
Gal, A.; Wirth, R.; Kopka, J.; Fratzl, P.; Faivre, D.; Scheffel, A.: Macromolecular recognition directs calcium ions to coccolith mineralization sites. Science 353 (6299), pp. 590 - 593 (2016)
47.
Journal Article
Galili, G.; Amir, R.; Fernie, A. R.: The Regulation of Essential Amino Acid Synthesis and Accumulation in Plants. Annual Review of Plant Biology, pp. 153 - 178 (2016)
48.
Journal Article
Garcia, V.; Bres, C.; Just, D.; Fernandez, L.; Tai, F. W. J.; Mauxion, J.-P.; Le Paslier, M.-C.; Bérard, A.; Brunel, D.; Aoki, K. et al.; Alseekh, S.; Fernie, A. R.; Fraser, P. D.; Rothan, &. C.: Rapid identification of causal mutations in tomato EMS populations via mapping-by-sequencing. Nature Protocols 11, pp. 2401 - 2418 (2016)
49.
Journal Article
Gaupels, F.; Furch, A. C. U.; Zimmermann, M. R.; Chen, F.; Keever, V.; Buhtz, A.; Kehr, J.; Sarioglu, H.; Kogel, K.-H.; Dumer, J.: Systemic Induction of NO-, Redox-, and cGMP Signaling in the Pumpkin Extrafascicular Phloem upon Local Leaf Wounding. Frontiers in Plant Science 7, 154 (2016)
50.
Journal Article
Gnanasekaran, T.; Karcher, D.; Nielsen, A. Z.; Martens, H. J.; Ruf, S.; Kroop, X.; Olsen, C. E.; Motawie, M. S.; Pribil, M.; Moller, B. L. et al.; Bock, R.; Jensen, P. E.: Transfer of the cytochrome P450-dependent dhurrin pathway from Sorghum bicolor into Nicotiana tabacum chloroplasts for light-driven synthesis. Journal of Experimental Botany 67 (8), pp. 2495 - 2506 (2016)
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