Publications of E. Sokolowska

Journal Article (14)

1.
Journal Article
Schlossarek, D., Luzarowski, M., Sokolowska, E., Gorka, M., Willmitzer, L. & Skirycz, A. PROMISed: A novel web-based tool to facilitate analysis and visualization of the molecular interaction networks from co-fractionation mass spectrometry (CF-MS) experiments. Computational and Structural Biotechnology Journal 19, 5117–5125 (2021).
2.
Journal Article
Luzarowski, M., Vicente, R., Kiselev, A., Wagner, M., Schlossarek, D., Erban, A., de Souza, L. P., Childs, D., Wojciechowska, I., Luzarowska, U., Gorka, M., Sokolowska, E., Kosmacz, M., Moreno, J. C., Brzezinska, A., Vegesna, B., Kopka, J., Fernie, A. R., Willmitzer, L., Ewald, J. C. & Skirycz, A. Global mapping of protein–metabolite interactions in Saccharomyces cerevisiae reveals that Ser-Leu dipeptide regulates phosphoglycerate kinase activity. Communications Biology 4, (2021).
3.
Journal Article
Omidbakhshfard, M. A., Sokolowska, E., Di Vittori, V., de Souza, L. P., Kuhalskaya, A., Brotman, Y., Alseekh, S., Fernie, A. R. & Skirycz, A. Multi-omics analysis of early leaf development in Arabidopsis thaliana. Patterns 2, (2021).
4.
Journal Article
Razaghi-Moghadam, Z., Sokolowska, E., Sowa, M. A., Skirycz, A. & Nikoloski, Z. Combination of network and molecule structure accurately predicts competitive inhibitory interactions. Computational and Structural Biotechnology Journal 19, 2170–2178 (2021).
5.
Journal Article
Schlossarek, D., Luzarowski, M., Sokolowska, E., Gorka, M., Willmitzer, L. & Skirycz, A. PROMISed: A novel web-based tool to facilitate analysis and visualization of the molecular interaction networks from co-fractionation mass spectrometry (CF-MS) experiments. Computational and Structural Biotechnology Journal (2021). doi:10.1016/j.csbj.2021.08.042
6.
Journal Article
Uflewski, M., Mielke, S., Correa Galvis, V., von Bismarck, T., Chen, X., Tietz, E., Ruß, J., Luzarowski, M., Sokolowska, E., Skirycz, A., Eirich, J., Finkemeier, I., Schöttler, M. A. & Armbruster, U. Functional characterization of proton antiport regulation in the thylakoid membrane. Plant Physiology (2021). doi:10.1093/plphys/kiab135
7.
Journal Article
Chodasiewicz, M., Sokolowska, E., Nelson-Dittrich, A. C., Masiuk, A., Moreno, J. C., Nelson, A. D. L. & Skirycz, A. Identification and Characterization of the Heat-Induced Plastidial Stress Granules Reveal New Insight Into Arabidopsis Stress Response. Frontiers in Plant Science 11, (2020).
8.
Journal Article
Kosmacz, M., Sokolowska, E., Bouzaa, S. & Skirycz, A. Towards a functional understanding of the plant metabolome. Current Opinion in Plant Biology 55, 47–51 (2020).
9.
Journal Article
Kosmacz, M., Gorka, M., Schmidt, S., Luzarowski, M., Moreno, J. C., Szlachetko, J., Leniak, E., Sokolowska, E., Sofroni, K., Schnittger, A. & Skirycz, A. Protein and metabolite composition of Arabidopsis stress granules. New Phytologist 222, 1420–1433 (2019).
10.
Journal Article
Sokolowska, E., Schlossarek, D., Luzarowski, M. & Skirycz, A. PROMIS: Global Analysis of PROtein-Metabolite Interactions. Current protocols in plant biology 4, (2019).
11.
Journal Article
Yang, L., Perrera, V., Saplaoura, E., Apelt, F., Bahin, M., Kramdi, A., Olas, J., Mueller-Roeber, B., Sokolowska, E., Zhang, W., Li, R., Pitzalis, N., Heinlein, M., Zhang, W., Genovesio, A., Colot, V. & Kragler, F. m5C Methylation Guides Systemic Transport of Messenger RNA over Graft Junctions in Plants. Current Biology 29, 2465–2476 (2019).
12.
Journal Article
Veyel, D., Sokolowska, E., Moreno, J. C., Kierszniowska, S., Cichon, J., Wojciechowska, I., Luzarowski, M., Kosmacz, M., Szlachetko, J., Gorka, M., Meret, M., Graf, A., Meyer, E. H., Willmitzer, L. & Skirycz, A. PROMIS, global analysis of PROtein-metabolite interactions using size separation in Arabidopsis thaliana. The Journal of Biological Chemistry 293, 12440–12453 (2018).
13.
Journal Article
Luzarowski, M., Kosmacz, M., Sokolowska, E., Jasinska, W., Willmitzer, L., Veyel, D. & Skirycz, A. Affinity purification with metabolomic and proteomic analysis unravels diverse roles of nucleoside diphosphate kinases. Journal of Experimental Botany 68, 3487–3499 (2017).
14.
Journal Article
Veyel, D., Kierszniowska, S., Kosmacz, M., Sokolowska, E., Michaelis, A., Luzarowski, M., Szlachetko, J., Willmitzer, L. & Skirycz, A. System-wide detection of protein-small molecule complexes suggests extensive metabolite regulation in plants. Scientific Reports 7, (2017).
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