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Journal Article (95)

1.
Journal Article
Guadalupe Dominguez, P., Conti, G., Duffy, T., Insani, M., Alseekh, S., Asurmendi, S., Fernie, A. R. & Carrari, F. Multi-omics analyses reveal the roles of the ASR1 transcription factor in tomato fruits. Journal of Experimental Botany (2021). doi:10.1093/jxb/erab269
2.
Journal Article
Zimmermann, S. E., Benstein, R. M., Flores-Tornero, M., Blau, S., Anoman, A. D., Rosa-Téllez, S., Gerlich, S. C., Salem, M. A., Alseekh, S., Kopriva, S., Wewer, V., Flügge, U.-I., Jacoby, R. P., Fernie, A. R., Giavalisco, P., Ros, R. & Krueger, S. The phosphorylated pathway of serine biosynthesis links plant growth with nitrogen metabolism. Plant Physiology (2021). doi:10.1093/plphys/kiab167
3.
Journal Article
de Souza, L. P., Alseekh, S., Scossa, F. & Fernie, A. R. Ultra-high-performance liquid chromatography high-resolution mass spectrometry variants for metabolomics research. Nature Methods (2021). doi:10.1038/s41592-021-01116-4
4.
Journal Article
Cortinovis, G., Oppermann, M., Neumann, K., Graner, A., Gioia, T., Marsella, M., Alseekh, S., Fernie, A. R., Papa, R., Bellucci, E. & Bitocchi, E. Towards the Development, Maintenance, and Standardized Phenotypic Characterization of Single-Seed-Descent Genetic Resources for Common Bean. Current Protocols in Plant Biology 1, (2021).
5.
Journal Article
Breitel, D., Brett, P., Alseekh, S., Fernie, A. R., Butelli, E. & Martin, C. Diverting tyrosine: Data from untargeted metabolic analysis of tomato fruit accumulating L-DOPA. Data in Brief 34, (2021).
6.
Journal Article
Brotman, Y., Llorente-Wiegand, C., Oyong, G., Badoni, S., Misra, G., Anacleto, R., Parween, S., Pasion, E., Tiozon Jr., R. N., Anonuevo, J. J., Krishna deGuzman, M., Alseekh, S., Mbanjo, E. G. N., Boyd, L. A., Fernie, A. R. & Sreenivasulu, N. The genetics underlying metabolic signatures in a brown rice diversity panel and their vital role in human nutrition. The Plant Journal 106, 507–527 (2021).
7.
Journal Article
Fernie, A. R., Alseekh, S., Liu, J. & Yan, J. Using Precision Phenotyping to Inform de novo Domestication. Plant Physiology (2021). doi:10.1093/plphys/kiab160
8.
Journal Article
Jiang, L., Yoshida, T., Stiegert, S., Yu, J., Alseekh, S., Lenhard, M., Pérez-Alfocea, F. & Fernie, A. R. Multi-omics approach reveals the contribution of KLU to leaf longevity and drought tolerance. Plant Physiology 185, 352–368 (2021).
9.
Journal Article
Krahmer, J., Abbas, A., Mengin, V., Ishihara, H., Romanowski, A., Furniss, J. J., Moraes, T. A., Krohn, N., Annunziata, M. G., Feil, R., Alseekh, S., Obata, T., Fernie, A. R., Stitt, M. & Halliday, K. J. Phytochromes control metabolic flux, and their action at the seedling stage determines adult plant biomass. Journal of Experimental Botany 72, 3263–3278 (2021).
10.
Journal Article
Omidbakhshfard, M. A., Sokolowska, E., Di Vittori, V., de Souza, L. P., Kuhalskaya, A., Brotman, Y., Alseekh, S., Fernie, A. R. & Skirycz, A. Multi-omics analysis of early leaf development in Arabidopsis thaliana. Patterns 2, (2021).
11.
Journal Article
Ren, Y., Li, M., Guo, S., Sun, H., Zhao, J., Zhang, J., Liu, G., He, H., Tian, S., Yu, Y., Gong, G., Zhang, H., Zhang, X., Alseekh, S., Fernie, A. R., Scheller, H. V. & Xu, Y. Evolutionary Gain of Oligosaccharide Hydrolysis and Sugar Transport Enhanced Carbohydrate Partitioning in Sweet Watermelon Fruits. The Plant Cell (2021). at <http://hdl.handle.net/21.11116/0000-0008-2FC3-8>
12.
Journal Article
Scossa, F., Alseekh, S. & Fernie, A. R. Integrating multi-omics data for crop improvement. Journal of Plant Physiology 257, (2021).
13.
Journal Article
Staykov, N. S., Angelov, M., Petrov, V., Minkov, P., Kanojia, A., Guinan, K. J., Alseekh, S., Fernie, A. R., Sujeeth, N. & Gechev, T. S. An Ascophyllum nodosum-Derived Biostimulant Protects Model and Crop Plants from Oxidative Stress. Metabolites 11, (2021).
14.
Journal Article
Wu, S., Alseekh, S., Brotman, Y. & Fernie, A. R. Metabolomic Analysis of Natural Variation in Arabidopsis. Methods in Molecular Biology 2200, 393–411 (2021).
15.
Journal Article
Di Vittori, V., Bitocchi, E., Rodriguez, M., Alseekh, S., Bellucci, E., Nanni, L., Gioia, T., Marzario, S., Logozzo, G., Rossato, M., De Quattro, C., Murgia, M. L., Ferreira, J. J., Campa, A., Xu, C., Fiorani, F., Sampathkumar, A., Fröhlich, A., Attene, G., Delledonne, M., Usadel, B., Fernie, A. R., Rau, D. & Papa, R. Pod indehiscence in common bean is associated to the fine regulation of PvMYB26. Journal of Experimental Botany 72, 1617–1633 (2020).
16.
Journal Article
Sewelam, N., Brilhaus, D., Bräutigam, A., Alseekh, S., Fernie, A. R. & Maurino, V. G. Molecular plant responses to combined abiotic stresses put a spotlight on unknown and abundant genes. Journal of Experimental Botany 71, 5098–5112 (2020).
17.
Journal Article
Aksenov, A. A., Laponogov, I., Zhang, Z., Doran, S. L. F., Belluomo, I., Veselkov, D., Bittremieux, W., Nothias, L. F., Nothias-Esposito, M., Maloney, K. N., Misra, B. B., Melnik, A. V., Smirnov, A., Du, X., Jones, K. L., Dorrestein, K., Panitchpakdi, M., Ernst, M., van der Hooft, J. J. J., Gonzalez, M., Carazzone, C., Amézquita, A., Callewaert, C., Morton, J. T., Quinn, R. A., Bouslimani, A., Orio, A. A., Petras, D., Smania, A. M., Couvillion, S. P., Burnet, M. C., Nicora, C. D., Zink, E., Metz, T. O., Artaev, V., Humston-Fulmer, E., Gregor, R., Meijler, M. M., Mizrahi, I., Eyal, S., Anderson, B., Dutton, R., Lugan, R., Boulch, P. L., Guitton, Y., Prevost, S., Poirier, A., Dervilly, G., Le Bizec, B., Fait, A., Persi, N. S., Song, C., Gashu, K., Coras, R., Guma, M., Manasson, J., Scher, J. U., Barupal, D. K., Alseekh, S., Fernie, A. R., Mirnezami, R., Vasiliou, V., Schmid, R., Borisov, R. S., Kulikova, L. N., Knight, R., Wang, M., Hanna, G. B., Dorrestein, P. C. & Veselkov, K. Auto-deconvolution and molecular networking of gas chromatography-mass spectrometry data. Nature Biotechnology 39, 169–173 (2020).
18.
Journal Article
Alseekh, S., Ofner, I., Liu, Z., Osorio, S., Vallarino, J. G., Last, R. L., Zamir, D., Tohge, T. & Fernie, A. R. Quantitative trait loci analysis (QTL) of seed specialized metabolites reveals seed-specific flavonols and differential regulation of glycoalkaloid content in tomato. The Plant Journal 103, 2007–2024 (2020).
19.
Journal Article
Alseekh, S., Scossa, F. & Fernie, A. R. Mobile Transposable Elements Shape Plant Genome Diversity. Trends in Plant Science 25, 1062–1064 (2020).
20.
Journal Article
Alseekh, S., de Souza, L. P., Benina, M. & Fernie, A. R. The Style and Substance of Plant Flavonoid decoration; Towards Defining both Structure and Function. Phytochemistry 174, (2020).
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