Publications of YJ Zhang

Journal Article (46)

1.
Journal Article
Zhang, Y. J. & Fernie, A. R. Dynamically regulating metabolic fluxes with synthetic metabolons. Trends in Biotechnology 40, 1019–1020 (2022).
2.
Journal Article
Stefan, T., Wu, X. N., Zhang, Y. J., Fernie, A. R. & Schulze, W. X. Regulatory Modules of Metabolites and Protein Phosphorylation in Arabidopsis Genotypes With Altered Sucrose Allocation. Frontiers in Plant Science 13, (2022).
3.
Journal Article
Amanda, D., Frey, F. P., Neumann, U., Przybyl, M., Šimura, J., Zhang, Y. J., Chen, Z., Gallavotti, A., Fernie, A. R., Ljung, K. & Acosta, I. F. Auxin boosts energy generation pathways to fuel pollen maturation in barley. Current Biology 32, 1798–1811 (2022).
4.
Journal Article
Fernie, A. R. & Zhang, Y. J. The Bacillus subtilis glutamate anti-metabolon. Nature Metabolism 4, 161–162 (2022).
5.
Journal Article
Qin, K., Fernie, A. R. & Zhang, Y. J. The assembly of super-complexes in the plant chloroplast. Biomolecules 11, (2021).
6.
Journal Article
Zhang, Y. J. & Fernie, A. R. Stable and temporary enzyme complexes and metabolons involved in energy and redox metabolism. ANTIOXIDANTS & REDOX SIGNALING 35, 788–807 (2021).
7.
Journal Article
Aarabi, F., Rakpenthai, A., Barahimipour, R., Gorka, M., Alseekh, S., Zhang, Y. J., Salem, M. A., Brückner, F., Omranian, N., Watanabe, M., Nikoloski, Z., Giavalisco, P., Tohge, T., Graf, A., Fernie, A. R. & Hoefgen, R. Sulfur Deficiency Induced genes affect seed protein accumulation and composition under sulfate deprivation. Plant Physiology 187, 2419–2434 (2021).
8.
Journal Article
Zhang, Y. J., Scossa, Federico, F. & Fernie, A. R. The genomes of Taxus species unveil novel candidates in the biosynthesis of taxoids. Molecular Plant 14, 1773–1775 (2021).
9.
Journal Article
Wu, T., Kerbler, S. M., Fernie, A. R. & Zhang, Y. J. Plant cell cultures as heterologous bio-factories for secondary metabolite production. Plant Communications 2, (2021).
10.
Journal Article
Moreno, J. C., Rojas, B. E., Vicente, R., Gorka, M., Matz, T., Kosmacz, M., Peralta-Ariza, J. S., Zhang, Y. J., Alseekh, S., Childs, D., Luzarowski, M., Nikoloski, Z., Zarivach, R., Walther, D., Hartman, M. D., Figueroa, C. M., Iglesias, A. A., Fernie, A. R. & Skirycz, A. Tyr-Asp inhibition of glyceraldehyde 3-phosphate dehydrogenase affects plant redox metabolism. EMBO Journal (2021). doi:10.15252/embj.2020106800
11.
Journal Article
Zhang, Y. J., Giese, J., Kerbler, S. M.-L., Siemiatkowska, B., de Souza, L. P., Alpers, J., Medeiros, D. B., Hincha, D. K., Daloso, D. M., Stitt, M., Finkemeier, I. & Fernie, A. R. Two mitochondrial phosphatases, PP2c63 and Sal2, are required for posttranslational regulation of the TCA cycle in Arabidopsis. Molecular Plant 14, 1104–1118 (2021).
12.
Journal Article
Cervela-Cardona, L., Yoshida, T., Zhang, Y. J., Okada, M., Fernie, A. R. & Mas, P. Circadian Control of Metabolism by the Clock Component TOC1. Frontiers in Plant Science 12, (2021).
13.
Journal Article
Kerbler, S. M.-L., Natale, R., Fernie, A. R. & Zhang, Y. J. From Affinity to Proximity Techniques to Investigate Protein Complexes in Plants. International Journal of Molecular Sciences 22, (2021).
14.
Journal Article
Pereira, L., Sapkota, M., Alonge, M., Zheng, Y., Zhang, Y. J., Razifard, H., Taitano, N. K., Schatz, M. C., Fernie, A. R., Wang, Y., Fei, Z., Caicedo, A. L., Tieman, D. M. & van der Knaap, E. Natural Genetic Diversity in Tomato Flavor Genes. Frontiers in Plant Science 12, (2021).
15.
Journal Article
Chen, M.-X., Zhang, Y. J., Fernie, A. R., Liu, Y.-G. & Zhu, F.-Y. SWATH-MS-Based Proteomics: Strategies and Applications in Plants. Trends in Biotechnology 39, 433–437 (2020).
16.
Journal Article
Chen, M.-X., Zhu, F.-Y., Gao, B., Ma, K.-L., Zhang, Y. J., Fernie, A. R., Chen, X., Dai, L., Ye, N.-H., Zhang, X., Tian, Y., Zhang, D., Xiao, S., Zhang, J. & Liu, Y.-G. Full-length transcript-based proteogenomics of rice improves its genome and proteome annotation. Plant Physiology 182, 1510–1526 (2020).
17.
Journal Article
Fernie, A. R., Zhang, Y. J. & Sampathkumar, A. Cytoskeleton Architecture Regulates Glycolysis Coupling Cellular Metabolism to Mechanical Cues. Trends in biochemical sciences 45, 637–638 (2020).
18.
Journal Article
Tohge, T., Scossa, F., Wendenburg, R., Frasse, P., Balbo, I., Watanabe, M., Alseekh, S., Jadha, S. S., Delfin, J. C., Lohse, M., Giavalisco, P., Usadel, B., Zhang, Y. J., Luo, J., Bouzayen, M. & Fernie, A. R. Exploiting natural variation in tomato to define pathway structure and metabolic regulation of fruit polyphenolics in the lycopersicum complex. Molecular Plant 13, 1027–1046 (2020).
19.
Journal Article
Toleco, M. R., Naake, T., Zhang, Y. J., Heazlewood, J. L. & Fernie, A. R. Plant Mitochondrial Carriers: Molecular Gatekeepers That Help to Regulate Plant Central Carbon Metabolism. Plants 9, (2020).
20.
Journal Article
Zhang, Y. J., Chen, M., Siemiatkowska, B., Toleco, M. R., Jing, Y., Strotmann, V., Zhang, J., Stahl, Y. & Fernie, A. R. A Highly Efficient Agrobacterium-Mediated Method for Transient Gene Expression and Functional Studies in Multiple Plant Species. Plant Communications 1, (2020).
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