Publications of A. R. Fernie

Journal Article (884)

1.
Journal Article
Zhang, F., Wu, J., Sade, N., Wu, S., Egbaria, A., Fernie, A. R., Yan, J., Qin, F., Chen, W., Brotman, Y. & Dai, M. Genomic basis underlying the metabolome-mediated drought adaptation of maize. Genome Biology 22, (2021).
2.
Journal Article
Aarabi, F., Rakpenthai, A., Barahimipour, R., Gorka, M., Alseekh, S., Zhang, Y. J., Salem, M. A., Brückner, F., Omranian, N., Watanabe, M., Nikoloski, Z., Giavalisco, P., Tohge, T., Graf, A., Fernie, A. R. & Hoefgen, R. Sulfur Deficiency Induced genes affect seed protein accumulation and composition under sulfate deprivation. Plant Physiology (2021). doi:10.1093/plphys/kiab386
3.
Journal Article
Zhang, Y. J., Scossa, Federico, F. & Fernie, A. R. The genomes of Taxus species unveil novel candidates in the biosynthesis of taxoids. Molecular Plant (2021). doi:10.1016/j.molp.2021.08.017
4.
Journal Article
Bellucci, E., Aguilar, O. M., Alseekh, S., Bett, K., Brezeanu, C., Cook, D., De la Rosa, L., Delledonne, M., Dostatny, D. F., Ferreira, J. J., Geffroy, V., Ghitarrini, S., Kroc, M., Kumar Agrawal, S., Logozzo, G., Marino, M., Mary-Huard, T., McClean, P., Meglič, V., Messer, T., Muel, F., Nanni, L., Neumann, K., Servalli, F., Străjeru, S., Varshney, R. K., Vasconcelos, M. W., Zaccardelli, M., Zavarzin, A., Bitocchi, E., Frontoni, E., Fernie, A. R., Gioia, T., Graner, A., Guasch, L., Prochnow, L., Opperman, M., Susek, K., Tenaillon, M. & Papa, R. The INCREASE project: Intelligent Collections of Food-Legume Genetic Resources for European Agrofood Systems. The Plant Journal (2021). doi:10.1111/tpj.15472
5.
Journal Article
Zhu, F. & Fernie, A. R. Plants upcycle gene functions to suit their roots. Trends in Plant Science (2021). doi:10.1016/j.tplants.2021.07.006
6.
Journal Article
Alseekh, S., Aharoni, A., Brotman, Y., Contrepois, K., D’Auria, J., Ewald, J., C. Ewald, J., Fraser, P. D., Giavalisco, P., Hall, R. D., Heinemann, M., Link, H., Luo, J., Neumann, S., Nielsen, J., de Souza, L. P., Saito, K., Sauer, U., Schroeder, F. C., Schuster, S., Siuzdak, G., Skirycz, A., Sumner, L. W., Snyder, M. P., Tang, H., Tohge, T., Wang, Y., Wen, W., Wu, S., Xu, G., Zamboni, N. & Fernie, A. R. Mass spectrometry-based metabolomics: a guide for annotation, quantification and best reporting practices. Nature Methods 18, 747–756 (2021).
7.
Journal Article
Guadalupe Dominguez, P., Conti, G., Duffy, T., Insani, M., Alseekh, S., Asurmendi, S., Fernie, A. R. & Carrari, F. Multi-omics analyses reveal the roles of the ASR1 transcription factor in tomato fruits. Journal of Experimental Botany (2021). doi:10.1093/jxb/erab269
8.
Journal Article
Moreno, J. C., Rojas, B. E., Vicente, R., Gorka, M., Matz, T., Kosmacz, M., Peralta-Ariza, J. S., Zhang, Y. J., Alseekh, S., Childs, D., Luzarowski, M., Nikoloski, Z., Zarivach, R., Walther, D., Hartman, M. D., Figueroa, C. M., Iglesias, A. A., Fernie, A. R. & Skirycz, A. Tyr-Asp inhibition of glyceraldehyde 3-phosphate dehydrogenase affects plant redox metabolism. EMBO Journal (2021). doi:10.15252/embj.2020106800
9.
Journal Article
Altman, A., Fan, L. J., Foyer, C., Cowling, W., Mittler, R., Qaim, M., Weber, A. P. M., Reynolds, M., Varshney, R. K. & Fernie, A. R. Past and Future Milestones of Plant Breeding. Trends in Plant Science 26, 530–538 (2021).
10.
Journal Article
Ancín, M., Larraya, L., Florez-Sarasa, I. D., Bénard, C., Fernández-San Millán, A., Veramendi, J., Gibon, Y., Fernie, A. R., Aranjuelo, I. & Farran, I. Thioredoxin m overexpression in chloroplasts alters carbon and nitrogen partitioning in tobacco plants. Journal of Experimental Botany (2021). doi:10.1093/jxb/erab193
11.
Journal Article
Ashraf, M., Mao, Q., Hong, J., Shi, L., Ran, X., Liaquat, F., Uzair, M., Liang, W., Fernie, A. R. & Shi, J. HSP70-16 and VDAC3 jointly inhibit seed germination under cold stress in Arabidopsis. Plant, Cell and Environment (2021). doi:10.1111/pce.14138
12.
Journal Article
Zimmermann, S. E., Benstein, R. M., Flores-Tornero, M., Blau, S., Anoman, A. D., Rosa-Téllez, S., Gerlich, S. C., Salem, M. A., Alseekh, S., Kopriva, S., Wewer, V., Flügge, U.-I., Jacoby, R. P., Fernie, A. R., Giavalisco, P., Ros, R. & Krueger, S. The phosphorylated pathway of serine biosynthesis links plant growth with nitrogen metabolism. Plant Physiology 186, 1487–1506 (2021).
13.
Journal Article
de Souza, L. P., Alseekh, S., Scossa, F. & Fernie, A. R. Ultra-high-performance liquid chromatography high-resolution mass spectrometry variants for metabolomics research. Nature Methods 18, 733–746 (2021).
14.
Journal Article
Borghi, M. & Fernie, A. R. From flowers to seeds: how the metabolism of flowers frames plant reproduction. The biochemist: the bulletin of the Biochemical Society 43, 14–18 (2021).
15.
Journal Article
Cortinovis, G., Oppermann, M., Neumann, K., Graner, A., Gioia, T., Marsella, M., Alseekh, S., Fernie, A. R., Papa, R., Bellucci, E. & Bitocchi, E. Towards the Development, Maintenance, and Standardized Phenotypic Characterization of Single-Seed-Descent Genetic Resources for Common Bean. Current Protocols in Plant Biology 1, (2021).
16.
Journal Article
Fernie, A. R. Associating primary and specialized metabolism with salt induced osmotic stress tolerance in maize. New Phytologist 230, 2991–2093 (2021).
17.
Journal Article
Zhang, Y. J., Giese, J., Kerbler, S. M.-L., Siemiatkowska, B., de Souza, L. P., Alpers, J., Medeiros, D. B., Hincha, D. K., Daloso, D. M., Stitt, M., Finkemeier, I. & Fernie, A. R. Two mitochondrial phosphatases, PP2c63 and Sal2, are required for posttranslational regulation of the TCA cycle in Arabidopsis. Molecular Plant 14, 1104–1118 (2021).
18.
Journal Article
Baptistella, J. L. C., Llerena, J. P. P., Domingues-Júnior, A. P., Fernie, A. R., Favarin, J. L. & Mazzafera, P. Differential responses of three Urochloa species to low phosphorus availability. Annals of Applied Biology 179, 216–230 (2021).
19.
Journal Article
Scossa, F. & Fernie, A. R. When a Crop Goes Back to the Wild: Feralization. Trends in Plant Science 26, 543–545 (2021).
20.
Journal Article
Alseekh, S., Kostova, D., Bulut, M. & Fernie, A. R. Genome-wide association studies: assessing trait characteristics in model and crop plants. Cellular and Molecular Life Sciences 78, 5743–5754 (2021).
Go to Editor View