All Publications

Max Planck Institute of Molecular Plant Physiology

Journal Article (4294)

3401.

Journal Article

Giavalisco, P.; Nordhoff, E.; Kreitler, T.; Kloppel, K. D.; Lehrach, H.; Klose, J.; Gobom, J.: Proteome analysis of Arabidopsis thaliana by two-dimensional gel electrophoresis and matrix-assisted laser desorption/ionisation-time of flight mass spectrometry. Proteomics 5 (7), pp. 1902 - 1913 (2005)

MPG.PuRe

3402.

Journal Article

Giavalisco, P.; Wilson, D.; Kreitler, T.; Lehrach, H.; Klose, J.; Gobom, J.; Fucini, P.: High heterogeneity within the ribosomal proteins of the Arabidopsis thaliana 80S ribosome. Plant Molecular Biology 57 (4), pp. 577 - 591 (2005)

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3403.

Journal Article

Gibeaut, D. M.; Pauly, M.; Bacic, A.; Fincher, G. B.: Changes in cell wall polysaccharides in developing barley (Hordeum vulgare) coleoptiles. Planta 221 (5), pp. 729 - 738 (2005)

MPG.PuRe

3404.

Journal Article

Glinski, M.; Weckwerth, W.: Differential Multisite Phosphorylation of the Trehalose-6-phosphate Synthase Gene Family in Arabidopsis thaliana: A Mass Spectrometry-based Process for Multiparallel Peptide Library Phosphorylation Analysis. Molecular & Cellular Proteomics 4 (10), pp. 1614 - 1625 (2005)

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3405.

Journal Article

Gomez-Merino, F. C.; Arana-Ceballos, F. A.; Trejo-Tellez, L. I.; Skirycz, A.; Brearley, C. A.; Doermann, P.; Mueller-Roeber, B.: Arabidopsis AtDGK7, the smallest member of plant diacylglycerol kinases (DGKs), displays unique biochemical features and saturates at low substrate concentration - The DGK inhibitor R59022 differentially affects AtDGK2 and AtDGK7 activity in vitro and alters plant growth and development. Journal of Biological Chemistry 280 (41), pp. 34888 - 34899 (2005)

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3406.

Journal Article

Gruhler, A.; Schulze, W. X.; Matthiesen, R.; Mann, M.; Jensen, O. N.: Stable isotope labeling of Arabidopsis thaliana cells and quantitative proteomics by mass spectrometry. Molecular & Cellular Proteomics 4 (11), pp. 1697 - 1709 (2005)

MPG.PuRe

3407.

Journal Article

Handorf, T.; Ebenhoeh, O.; Heinrich, R.: Expanding metabolic networks: scopes of compounds, robustness, and evolution. Journal of Molecular Evolution 61 (4), pp. 498 - 512 (2005)

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3408.

Journal Article

Hannah, M. A.; Heyer, A. G.; Hincha, D. K.: A global survey of gene regulation during cold acclimation in Arabidopsis thaliana. PLoS Genetics 1 (2), p. e26 (2005)

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3409.

Journal Article

Havaux, M.; Eymery, F.; Porfirova, S.; Rey, P.; Doermann, P.: Vitamin E protects against photoinhibition and photooxidative stress in Arabidopsis thaliana. Plant Cell 17 (12), pp. 3451 - 3469 (2005)

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3410.

Journal Article

Hopkins, L.; Parmar, S.; Baszczyk, A.; Hesse, H.; Hoefgen, R.; Hawkesford, M. J.: O-acetylserine and the regulation of expression of genes encoding components for sulfate uptake and assimilation in potato. Plant Physiology 138 (1), pp. 433 - 440 (2005)

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3411.

Journal Article

Hummel, J.; Keshvari, N.; Weckwerth, W.; Selbig, J.: Species-specific analysis of protein sequence motifs using mutual information. BMC Bioinformatics 6, p. 164 (2005)

MPG.PuRe

3412.

Journal Article

Ishizaki, K.; Larson, T. R.; Schauer, N.; Fernie, A. R.; Graham, I. A.; Leaver, C. J.: The critical role of Arabidopsis electron-transfer flavoprotein: Ubiquinone oxidoreductase during dark-induced starvation. Plant Cell 17 (9), pp. 2587 - 2600 (2005)

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3413.

Journal Article

Kanter, U.; Usadel, B.; Guerineau, F.; Li, Y.; Pauly, M.; Tenhaken, R.: The inositol oxygenase gene family of Arabidopsis is involved in the biosynthesis of nucleotide sugar precursors for cell-wall matrix polysaccharides. Planta 221 (2), pp. 243 - 254 (2005)

MPG.PuRe

3414.

Journal Article

Kanwischer, M.; Porfirova, S.; Bergmueller, E.; Doermann, P.: Alterations in tocopherol cyclase activity in transgenic and mutant plants of arabidopsis affect tocopherol content, tocopherol composition, and oxidative stress. Plant Physiology 137 (2), pp. 713 - 723 (2005)

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3415.

Journal Article

Kehr, J.; Buhtz, A.; Giavalisco, P.: Analysis of xylem sap proteins from Brassica napus. BMC Plant Biology 5, p. 11 (2005)

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3416.

Journal Article

Koetting, O.; Pusch, K.; Tiessen, A.; Geigenberger, P.; Steup, M.; Ritte, G.: Identification of a novel enzyme required for starch metabolism in Arabidopsis leaves. The phosphoglucan, water dikinase. Plant Physiology 137 (1), pp. 242 - 252 (2005)

MPG.PuRe

3417.

Journal Article

Köhler, C.; Page, D. R.; Gagliardini, V.; Grossniklaus, U.: The Arabidopsis thaliana MEDEA Polycomb group protein controls expression of PHERES1 by parental imprinting. Nature Genetics 37 (1), pp. 28 - 30 (2005)

MPG.PuRe

3418.

Journal Article

Kolbe, A.; Tiessen, A.; Schluepmann, H.; Paul, M.; Ulrich, S.; Geigenberger, P.: Trehalose 6-phosphate regulates starch synthesis via posttranslational redox activation of ADP-glucose pyrophosphorylase. Proceedings of the National Academy of Sciences of the United States of America 102 (31), pp. 11118 - 11123 (2005)

MPG.PuRe

3419.

Journal Article

Kopka, J.; Schauer, N.; Krueger, S.; Birkemeyer, C.; Usadel, B.; Bergmueller, E.; Doermann, P.; Weckwerth, W.; Gibon, Y.; Stitt, M. et al.; Willmitzer, L.; Fernie, A. R.; Steinhauser, D.: GMD@CSB.DB: the Golm Metabolome Database. Bioinformatics 21 (8), pp. 1635 - 1638 (2005)

MPG.PuRe

3420.

Journal Article

Krusell, L.; Krause, K.; Ott, T.; Desbrosses, G.; Kraemer, U.; Sato, S.; Nakamura, Y.; Tabata, S.; James, E. K.; Sandal, N. et al.; Stougaard, J.; Kawaguchi, M.; Miyamoto, A.; Suganuma, N.; Udvardi, M. K.: The sulfate transporter SST1 is crucial for symbiotic nitrogen fixation in Lotus japonicus root nodules. Plant Cell 17 (5), pp. 1625 - 1636 (2005)

MPG.PuRe

3421.

Journal Article

Laitinen, R. A.; Immanen, J.; Auvinen, P.; Rudd, S.; Alatalo, E.; Paulin, L.; Ainasoja, M.; Kotilainen, M.; Koskela, S.; Teeri, T. H. et al.; Elomaa, P.: Analysis of the floral transcriptome uncovers new regulators of organ determination and gene families related to flower organ differentiation in Gerbera hybrida (Asteraceae). Genome Research 15 (4), pp. 475 - 486 (2005)

MPG.PuRe

3422.

Journal Article

Lanquar, V.; Lelievre, F.; Bolte, S.; Hames, C.; Alcon, C.; Neumann, D.; Vansuyt, G.; Curie, C.; Schroeder, A.; Kraemer, U. et al.; Barbier-Brygoo, H.; Thomine, S.: Mobilization of vacuolar iron by AtNRAMP3 and AtNRAMP4 is essential for seed germination on low iron. EMBO Journal 24 (23), pp. 4041 - 4051 (2005)

MPG.PuRe

3423.

Journal Article

Lin, W. H.; Wang, Y.; Mueller-Roeber, B.; Brearley, C. A.; Xu, Z. H.; Xue, H.-W.: At5PTase13 modulates cotyledon vein development through regulating auxin homeostasis. Plant Physiology 139 (4), pp. 1677 - 1691 (2005)

MPG.PuRe

3424.

Journal Article

Lisso, J.; Steinhauser, D.; Altmann, T.; Kopka, J.; Muessig, C.: Identification of brassinosteroid-related genes by means of transcript co-response analyses. Nucleic Acids Research 33 (8), pp. 2685 - 2696 (2005)

MPG.PuRe

3425.

Journal Article

Liu, C. M.; Willmund, F.; Whitelegge, J. P.; Hawat, S.; Knapp, B.; Lodha, M.; Schroda, M.: J-domain protein CDJ2 and HSP70B are a plastidic chaperone pair that interacts with vesicle-inducing protein in plastids 1. Molecular Biology of the Cell 16 (3), pp. 1165 - 1177 (2005)

MPG.PuRe

3426.

Journal Article

Lodha, M.; Schroda, M.: Analysis of chromatin structure in the control regions of the Chlamydomonas HSP70A and RBCS2 genes. Plant Molecular Biology 59 (3), pp. 501 - 513 (2005)

MPG.PuRe

3427.

Journal Article

Lohse, S.; Schliemann, W.; Ammer, C.; Kopka, J.; Strack, D.; Fester, T.: Organization and metabolism of plastids and mitochondria in arbuscular mycorrhizal roots of Medicago truncatula. Plant Physiology 139 (1), pp. 329 - 340 (2005)

MPG.PuRe

3428.

Journal Article

Lorenc-Kukula, K.; Amarowicz, R.; Oszmianski, J.; Doermann, P.; Starzycki, M.; Skala, J.; Zuk, M.; Kulma, A.; Szopa, J.: Pleiotropic effect of phenolic compounds content increases in transgenic flax plant. Journal of Agricultural and Food Chemistry 53 (9), pp. 3685 - 3692 (2005)

MPG.PuRe

3429.

Journal Article

Lossl, A.; Bohmert, K.; Harloff, H.; Eibl, C.; Muhlbauer, S.; Koop, H. U.: Inducible trans-activation of plastid transgenes: Expression of the R. eutropha phb operon in transplastomic tobacco. Plant and Cell Physiology 46 (9), pp. 1462 - 1471 (2005)

MPG.PuRe

3430.

Journal Article

Lytovchenko, A.; Hajirezaei, M.-R.; Eickmeier, I.; Mittendorf, V.; Sonnewald, U.; Willmitzer, L.; Fernie, A. R.: Expression of an Escherichia coli phosphoglucomutase in potato (Solanum tuberosum L.) results in minor changes in tuber metabolism and a considerable delay in tuber sprouting. Planta 221 (6), pp. 915 - 927 (2005)

MPG.PuRe

3431.

Journal Article

Lytovchenko, A.; Schauer, N.; Willmitzer, L.; Fernie, A. R.: Tuber-specific cytosolic expression of a bacterial phosphoglucomutase in potato (Solanum tuberosum L.) dramatically alters carbon partitioning. Plant and Cell Physiology 46 (4), pp. 588 - 597 (2005)

MPG.PuRe

3432.

Journal Article

McGrath, K. C.; Dombrecht, B.; Manners, J. M.; Schenk, P. M.; Edgar, C. I.; Maclean, D. J.; Scheible, W.-R.; Udvardi, M. K.; Kazan, K.: Repressor- and activator-type ethylene response factors functioning in jasmonate signaling and disease resistance identified via a genome-wide screen of Arabidopsis transcription factor gene expression. Plant Physiology 139 (2), pp. 949 - 959 (2005)

MPG.PuRe

3433.

Journal Article

Michard, E.; Lacombe, B.; Poree, F.; Mueller-Roeber, B.; Sentenac, H.; Thibaud, J. B.; Dreyer, I.: A unique voltage sensor sensitizes the potassium channel AKT2 to phosphoregulation. Journal of General Physiology 126 (6), pp. 605 - 617 (2005)

MPG.PuRe

3434.

Journal Article

Morgenthal, K.; Wienkoop, S.; Scholz, M.; Selbig, J.; Weckwerth, W.: Correlative GC-TOF-MS-based metabolite profiling and LC-MS-based protein profiling reveal time-related systemic regulation of metabolite-protein networks and improve pattern recognition for multiple biomarker selection. Metabolomics 1 (2), pp. 109 - 121 (2005)

MPG.PuRe

3435.

Journal Article

Mueller-Roeber, B.; Riano-Pachon, D.M.; Ruzicic, S.; Skirycz, A.; Caldana, C.; Witt, I.; Zanor, M.-I.: Pflanzliche Regulatorproteine. Bioforum 6, pp. 32 - 34 (2005)

MPG.PuRe

3436.

Journal Article

Nikiforova, V. J.; Daub, C. O.; Hesse, H.; Willmitzer, L.; Hoefgen, R.: Integrative gene-metabolite network with implemented causality deciphers informational fluxes of sulphur stress response. Journal of Experimental Botany 56 (417), pp. 1887 - 1896 (2005)

MPG.PuRe

3437.

Journal Article

Nikiforova, V. J.; Kopka, J.; Tolstikov, V.; Fiehn, O.; Hopkins, L.; Hawkesford, M. J.; Hesse, H.; Hoefgen, R.: Systems rebalancing of metabolism in response to sulfur deprivation, as revealed by metabolome analysis of arabidopsis plants. Plant Physiology 138 (1), pp. 304 - 318 (2005)

MPG.PuRe

3438.

Journal Article

Nunes-Nesi, A.; Carrari, F.; Lytovchenko, A.; Smith, A. M. O.; Loureiro, M. E.; Ratcliffe, R. G.; Sweetlove, L. J.; Fernie, A. R.: Enhanced photosynthetic performance and growth as a consequence of decreasing mitochondrial malate dehydrogenase activity in transgenic tomato plants. Plant Physiology 137 (2), pp. 611 - 622 (2005)

MPG.PuRe

3439.

Journal Article

Oliver, S. N.; van Dongen, J. T.; Alfred, S. C.; Mamun, E. A.; Zhao, X. C.; Saini, H. S.; Fernandes, S. F.; Blanchard, C. L.; Sutton, B. G.; Geigenberger, P. et al.; Dennis, E. S.; Dolferus, R.: Cold-induced repression of the rice anther-specific cell wall invertase gene OSINV4 is correlated with sucrose accumulation and pollen sterility. Plant Cell and Environment 28 (12), pp. 1534 - 1551 (2005)

MPG.PuRe

3440.

Journal Article

Ott, T.; van Dongen, J. T.; Gunther, C.; Krusell, L.; Desbrosses, G.; Vigeolas, H.; Bock, V.; Czechowski, T.; Geigenberger, P.; Udvardi, M. K.: Symbolic leghemoglobins are crucial for nitrogen fixation in legume root nodules but not for general plant growth and development. Current Biology 15 (6), pp. 531 - 535 (2005)

MPG.PuRe

3441.

Journal Article

Persson, S.; Rosenquist, M.; Knoblach, B.; Khosravi-Far, R.; Sommarin, M.; Michalak, M.: Diversity of the protein disulfide isomerase family: Identification of breast tumor induced Hag2 and Hag3 as novel members of the protein family. Molecular Phylogenetics and Evolution 36 (3), pp. 734 - 740 (2005)

MPG.PuRe

3442.

Journal Article

Persson, S.; Wei, H. R.; Milne, J.; Page, G. P.; Somerville, C. R.: Identification of genes required for cellulose synthesis by regression analysis of public microarray data sets. Proceedings of the National Academy of Sciences of the United States of America 102 (24), pp. 8633 - 8638 (2005)

MPG.PuRe

3443.

Journal Article

Pinheiro, C.; Kehr, J.; Ricardo, C. P.: Effect of water stress on lupin stem protein analysed by two-dimensional gel electrophoresis. Planta 221 (5), pp. 716 - 728 (2005)

MPG.PuRe

3444.

Journal Article

Popova, A. V.; Hincha, D. K.: Effects of the sugar headgroup of a glycoglycerolipid on the phase behavloir of phospholipid model membranes in the dry state. Glycobiology 15 (11), pp. 1150 - 1155 (2005)

MPG.PuRe

3445.

Journal Article

Rautengarten, C.; Steinhauser, D.; Buessis, D.; Stintzi, A.; Schaller, A.; Kopka, J.; Altmann, T.: Inferring Hypotheses on Functional Relationships of Genes: Analysis of the Arabidopsis thaliana Subtilase Gene Family. PLoS Computational Biology 1 (4), p. e40 (2005)

MPG.PuRe

3446.

Journal Article

Repsilber, D.; Fink, L.; Jacobsen, M.; Blasing, O.; Ziegler, A.: Sample selection for microarray gene expression studies. Methods of Information in Medicine 44 (3), pp. 461 - 467 (2005)

MPG.PuRe

3447.

Journal Article

Riano-Pachon, D. M.; Dreyer, I.; Mueller-Roeber, B.: Orphan transcripts in Arabidopsis thaliana: identification of several hundred previously unrecognized genes. Plant Journal 43 (2), pp. 205 - 212 (2005)

MPG.PuRe

3448.

Journal Article

Riemenschneider, A.; Nikiforova, V.; Hoefgen, R.; De Kok, L. J.; Papenbrock, J.: Impact of elevated H2S on metabolite levels, activity of enzymes and expression of genes involved in cysteine metabolism. Plant Physiology and Biochemistry 43 (5), pp. 473 - 483 (2005)

MPG.PuRe

3449.

Journal Article

Riemenschneider, A.; Riedel, K.; Hoefgen, R.; Papenbrock, J.; Hesse, H.: Impact of reduced O-acetylserine(thiol)lyase isoform contents on potato plant metabolism. Plant Physiology 137 (3), pp. 892 - 900 (2005)

MPG.PuRe

3450.

Journal Article

Schad, M.; Lipton, M. S.; Giavalisco, P.; Smith, R. D.; Kehr, J.: Evaluation of two-dimensional electrophoresis and liquid chromatography tandem mass spectrometry for tissue-specific protein profiling of laser-microdissected plant samples. Electrophoresis 26 (14), pp. 2729 - 2738 (2005)

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