Publications of the Group

Journal Article (113)

1.
Journal Article
Aarabi, F., Rakpenthai, A., Barahimipour, R., Gorka, M., Alseekh, S., Zhang, Y. J., Salem, M. A., Brückner, F., Omranian, N., Watanabe, M., Nikoloski, Z., Giavalisco, P., Tohge, T., Graf, A., Fernie, A. R. & Hoefgen, R. Sulfur Deficiency Induced genes affect seed protein accumulation and composition under sulfate deprivation. Plant Physiology (2021). doi:10.1093/plphys/kiab386
2.
Journal Article
Ginsawaeng, O., Gorka, M., Erban, A., Heise, C., Brueckner, F., Hoefgen, R., Kopka, J., Skirycz, A., Hincha, D. K. & Zuther, E. Characterization of the Heat-Stable Proteome during Seed Germination in Arabidopsis with Special Focus on LEA Proteins. International Journal of Molecular Sciences 22, (2021).
3.
Journal Article
Heyneke, E. & Hoefgen, R. Meeting the complexity of plant nutrient metabolism with multi-omics approaches. Journal of Experimental Botany 72, 2261–2265 (2021).
4.
Journal Article
Olas, J. J., Apelt, F., Watanabe, M., Hoefgen, R. & Wahl, V. Developmental stage-specific metabolite signatures in Arabidopsis thaliana under optimal and mild nitrogen limitation. Plant Science 303, (2021).
5.
Journal Article
Sangpong, L., Khaksar, G., Pinsorn, P., Oikawa, A., Sasaki, R., Erban, A., Watanabe, M., Wangpaiboon, K., Tohge, T., Kopka, J., Hoefgen, R., Saito, K. & Sirikantaramas, S. Assessing Dynamic Changes of Taste-Related Primary Metabolism During Ripening of Durian Pulp Using Metabolomic and Transcriptomic Analyses. Frontiers in Plant Science 12, (2021).
6.
Journal Article
Cesarino, I., Ioio, R. D., Kirschner, G. K., Ogden, M., Picard, K. L., Rast-Somssich, M. I. & Somssich, M. Plant Science’s Next Top Models. Annals of Botany 126, 1–23 (2020).
7.
Journal Article
Aarabi, F., Naake, T., Fernie, A. R. & Hoefgen, R. Coordinating Sulfur Pools under Sulfate Deprivation. Trends in Plant Science 25, 1227–1239 (2020).
8.
Journal Article
Chorianopoulou, S. N., Sigalas, P. P., Tsoutsoura, N., Apodiakou, A., Saridis, G., Ventouris, Y. E. & Bouranis, D. L. Regulation of Sulfur Homeostasis in Mycorrhizal Maize Plants Grown in a Fe-Limited Environment. International Journal of Molecular Sciences 21, (2020).
9.
Journal Article
Correa Galvis, V., Strand, D., Messer, M., Thiele, W., Bethmann, S., Hübner, D., Uflewski, M., Kaiser, E., Siemiatkowska, B., Morris, B. A., Toth, S. Z., Watanabe, M., Brückner, F., Hoefgen, R., Jahns, P., Schöttler, M. A. & Armbruster, U. H+ transport by K+ EXCHANGE ANTIPORTER3 promotes photosynthesis and growth in chloroplast ATP synthase mutants. Plant Physiology 182, 2126–2142 (2020).
10.
Journal Article
Devkar, V., Thirumalaikumar, V. P., Xue, G.-P., Vallarino, J. G., Turečková, V., Strnad, M., Fernie, A. R., Hoefgen, R., Mueller-Roeber, B. & Balazadeh, S. Multifaceted regulatory function of tomato SlTAF1 in the response to salinity stress. New Phytologist 225, 1681–1698 (2020).
11.
Journal Article
Dietzen, C., Koprivova , A., Whitcomb, S. J., Langen, G., Jobe, T. O., Hoefgen, R. & Kopriva, S. The transcription factor EIL1 participates in the regulation of sulfur-deficiency response. Plant Physiology 184, 2120–2136 (2020).
12.
Journal Article
Fichtner, F., Olas, J. J., Feil, R., Watanabe, M., Krause, U., Hoefgen, R., Stitt, M. & Lunn, J. E. Functional features of TREHALOSE-6-PHOSPHATE SYNTHASE1 - an essential enzyme in Arabidopsis thaliana. The Plant Cell 32, 1949–1972 (2020).
13.
Journal Article
Matos, Â. P., Kauffman, A., Vickery, C., Naegeli, K., Strittmatter, L., Sybirna, A., van Blijswijk, J., Adlung, L., Berbasova, T., Enterina, J., Eismann, L., Tierney, B., Jordi, J., Zhu, L., Verkuijl, S., Tallorin, L., Wehling, A., Ogden, M., Lammel, S., Hasslacher, M. K., Wuelfroth, P., Neumann, S., Tidona, C. & Betz, U. A. K. Synthetic Biology Category Wins the 350th Anniversary Merck Innovation Cup. Trends in Biotechnology 38, 1–4 (2020).
14.
Journal Article
Tohge, T., Scossa, F., Wendenburg, R., Frasse, P., Balbo, I., Watanabe, M., Alseekh, S., Jadha, S. S., Delfin, J. C., Lohse, M., Giavalisco, P., Usadel, B., Zhang, Y. J., Luo, J., Bouzayen, M. & Fernie, A. R. Exploiting natural variation in tomato to define pathway structure and metabolic regulation of fruit polyphenolics in the lycopersicum complex. Molecular Plant 13, 1027–1046 (2020).
15.
Journal Article
Watanabe, M., Ueda, Y., Kondo, K., Ishikawa, S., Tohge, T., Burgos, A., Brotman, Y., Fernie, A. R., Walther, D., Hoefgen, R. & Wissuwa, M. Metabolomic markers and physiological adaptations for high phosphate utilization efficiency in rice. Plant, Cell and Environment 43, 2066–2079 (2020).
16.
Journal Article
Whitcomb, S. J., Rakpenthai, A., Brückner, F., Fischer, A., Parmar, S., Erban, A., Kopka, J., Hawkesford, M. J. & Hoefgen, R. Cysteine and Methionine Biosynthetic Enzymes Have Distinct Effects on Seed Nutritional Quality and on Molecular Phenotypes Associated With Accumulation of a Methionine-Rich Seed Storage Protein in Rice. Frontiers in Plant Science 11, (2020).
17.
Journal Article
Watanabe, M. & Hoefgen, R. Sulphur systems biology—making sense of omics data. Journal of Experimental Botany 70, 4155–4170 (2019).
18.
Journal Article
Beshir, W. F., Tohge, T., Watanabe, M., Hertog, M. L. A. T. M., Hoefgen, R., Fernie, A. R. & Nicolaï, B. M. Non-aqueous fractionation revealed changing subcellular metabolite distribution during apple fruit development. Horticulture Research 6, (2019).
19.
Journal Article
Casartelli, A., Melino, V. J., Baumann, U., Riboni, M., Suchecki, R., Jayasinghe, N. S., Mendis, H., Watanabe, M., Erban, A., Zuther, E., Hoefgen, R., Roessner, U., Okamoto, M. & Heuer, S. Opposite fates of the purine metabolite allantoin under water and nitrogen limitations in bread wheat. Plant Molecular Biology 99, 477–497 (2019).
20.
Journal Article
Flis, A., Mengin, V., Ivakov, A., Mugford, S. T., Hubberten, H. M., Encke, B., Krohn, N., Höhne, M., Feil, R., Hoefgen, R., Lunn, J. E., Millar, A. J., Smith, A. M., Sulpice, R. & Stitt, M. Multiple circadian clock outputs regulate diel turnover of carbon and nitrogen reserves. Plant, Cell and Environment 42, 549–573 (2019).
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