Publications of T. Tohge

Carreno-Quintero, N., Tohge, T., Van Acker, R., McKee, L. S., Zhou, Q., Bolze, A., Xing, X., Özparpucu, M., Rüggeberg, M., Piofczyk, T., Koram, Y., Bulone, V., Boerjan, W., Fernie, A. R. & Fraser, P. D. Non-targeted discovery of high-value bio-products in Nicotiana glauca L: a potential renewable plant feedstock. Bioresources and Bioprocessing 11, (2024).

Jing, Y., Watanabe, M., Aarabi, F., Fernie, A. R., Borghi, M. & Tohge, T. Cross-Species Metabolomic Analyses In The Brassicaceae Reveals Common Responses To Ultraviolet-B Exposure. Plant and Cell Physiology 64, 1523–1533 (2023).

Aghajanzadeh, T. A., Watanabe, M., Tohge, T., Hawkesford, M. J., Fernie, A. R., Hoefgen, R., Elzenga, J. T. M. & De Kok, L. J. Necrotrophic fungal infection affects indolic glucosinolate metabolism in Brassica rapa. Acta Physiologiae Plantarum 45, (2023).

Borghi, M., de Souza, L. P., Tohge, T., Mi, J. N., Melandri, G., Proost, S., Martins, M. C. M., Al-Babili, S., Bouwmeester, H. J. & Fernie, A. R. High-energy-level metabolism and transport occur at the transition from closed to open flowers. Plant Physiology 190, 319–339 (2022).

Zhu, F., Jadhav, S. S., Tohge, T., Salem, M. A., Li, J. M., Giovannoni, J. J., Cheng, Y., Alseekh, S. & Fernie, A. R. A comparative transcriptomics and eQTL approach identifies SlWD40 as a tomato fruit ripening regulator. Plant Physiology 190, 250–266 (2022).

Lemaire-Chamley, M., Koutouan, C., Jorly, J., Assali, J., Yoshida, T., Nogueira, M., Tohge, T., Ferrand, C., Peres, L. E. P., Asamizu, E., Ezura, H., Fraser, P. D., Hajirezaei, M. R., Fernie, A. R. & Rothan, C. A Chimeric TGA Repressor Slows Down Fruit Maturation and Ripening in Tomato. Plant and Cell Physiology 63, 120–134 (2022).

Aarabi, F., Rakpenthai, A., Barahimipour, R., Gorka, M., Alseekh, S., Zhang, Y. J., Salem, M. A., Brückner, F., Omranian, N., Watanabe, M., Nikoloski, Z., Giavalisco, P., Tohge, T., Graf, A., Fernie, A. R. & Hoefgen, R. Sulfur Deficiency Induced genes affect seed protein accumulation and composition under sulfate deprivation. Plant Physiology 187, 2419–2434 (2021).

Bottcher, A., Domingues Júnior, A. P., de Souza, L. P., Tohge, T., Araujo, W. L., Fernie, A. R. & Mazzafera, P. Sugarcane cell suspension reveals major metabolic changes under different nitrogen starvation regimes. BRAGANTIA 80, (2021).

Israeli, A., Burko, Y., Shleizer-Burko, S., Zelnik, I. D., Sela, N., Hajirezaei, M. R., Fernie, A. R., Tohge, T., Ori, N. & Bar, M. Coordinating the morphogenesis-differentiation balance by tweaking the cytokinin-gibberellin equilibrium. PLoS Genetics 17, (2021).

Liu, Y., Watanabe, M., Yasukawa, S., Kawamura, Y., Aneklaphakij, C., Fernie, A. R. & Tohge, T. Cross-Species Metabolic Profiling of Floral Specialized Metabolism Facilitates Understanding of Evolutional Aspects of Metabolism Among Brassicaceae Species. Frontiers in Plant Science 12, (2021).

Schulz, E., Tohge, T., Winkler, J. B., Albert, A., Schäffner, A. R., Fernie, A. R., Zuther, E. & Hincha, D. K. Natural Variation among Arabidopsis Accessions in the Regulation of Flavonoid Metabolism and Stress Gene Expression by Combined UV Radiation and Cold. Plant and Cell Physiology 62, 502–514 (2021).

Alseekh, S., Ofner, I., Liu, Z., Osorio, S., Vallarino, J. G., Last, R. L., Zamir, D., Tohge, T. & Fernie, A. R. Quantitative trait loci analysis (QTL) of seed specialized metabolites reveals seed-specific flavonols and differential regulation of glycoalkaloid content in tomato. The Plant Journal 103, 2007–2024 (2020).

Ferrari, C., Shivhare, D., Hansen, B. O., Pasha, A., Esteban, E., Provart, N. J., Kragler, F., Fernie, A. R., Tohge, T. & Mutwil, M. Expression Atlas of Selaginella moellendorffii Provides Insights into the Evolution of Vasculature, Secondary Metabolism, and Roots. The Plant Cell 32, 853–870 (2020).

Hu, C., Rao, J., Song, Y., Chan, S.-A., Tohge, T., Cui, B., Lin, H., Fernie, A. R., Zhang, D. & Shi, J. Dissection of flag leaf metabolic shifts and their relationship with those occurring simultaneously in developing seed by application of non-targeted metabolomics. PLoS One 15, (2020).

McQuinn, R. P., Gapper, N. E., Gray, A. G., Zhong, S., Tohge, T., Fei, Z., Fernie, A. R. & Giovannoni, J. J. Manipulation of ZDS in tomato exposes carotenoid- and ABA-specific effects on fruit development and ripening. Plant Biotechnology Journal 18, 2210–2224 (2020).

Richter, A. S., Tohge, T., Fernie, A. R. & Grimm, B. The genomes uncoupled -dependent signalling pathway coordinates plastid biogenesis with the synthesis of anthocyanins. Philosophical Transactions of the Royal Society of London, Series B: Biological Sciences 375, (2020).

Tohge, T., Scossa, F., Wendenburg, R., Frasse, P., Balbo, I., Watanabe, M., Alseekh, S., Jadha, S. S., Delfin, J. C., Lohse, M., Giavalisco, P., Usadel, B., Zhang, Y. J., Luo, J., Bouzayen, M. & Fernie, A. R. Exploiting natural variation in tomato to define pathway structure and metabolic regulation of fruit polyphenolics in the lycopersicum complex. Molecular Plant 13, 1027–1046 (2020).

Watanabe, M., Ueda, Y., Kondo, K., Ishikawa, S., Tohge, T., Burgos, A., Brotman, Y., Fernie, A. R., Walther, D., Hoefgen, R. & Wissuwa, M. Metabolomic markers and physiological adaptations for high phosphate utilization efficiency in rice. Plant, Cell and Environment 43, 2066–2079 (2020).

de Souza, L. P., Scossa, F., Proost, S., Bitocchi, E., Papa, R., Tohge, T. & Fernie, A. R. Multi-tissue integration of transcriptomic and specialized metabolite profiling provides tools for assessing the common bean (Phaseolus vulgaris) metabolome. The Plant Journal 97, 1132–1153 (2019).

Battat, M., Eitan, A., Rogachev, I., Hanhineva, K., Fernie, A. R., Tohge, T., Beekwilder, J. & Aharoni, A. A MYB Triad Controls Primary and Phenylpropanoid Metabolites for Pollen Coat Patterning. Plant Physiology 180, 87–108 (2019).