Publications of A. R. Fernie

Li, X., Tieman, D., Alseekh, S., Fernie, A. R. & Klee, H. J. Natural variations in the Sl-AKR9 aldo/keto reductase gene impact fruit flavor volatile and sugar contents. The Plant Journal 115, 1134–1150 (2023).

Vallarino, J. G., Hong, J., Wang, S., Wang, X., Sade, N., Orf, I., Zhang, D., Shi, J., Shen, S., Cuadros-Inostroza, Á., Xu, Q., Luo, J., Fernie, A. R. & Brotman, Y. Limitations and advantages of using metabolite-based genome-wide association studies: Focus on fruit quality traits. Plant Science 333, (2023).

Dahmani, I., Qin, K., Zhang, Y. J. & Fernie, A. R. The Formation and Function of Plant Metabolons. The Plant Journal 114, 1080–1092 (2023).

Tiozon, R. J. N., Fettke, J., Sreenivasulu, N. & Fernie, A. R. More than the main structural genes: Regulation of resistant starch formation in rice endosperm and its potential application. Journal of Plant Physiology 285, (2023).

Siqueira, J. A., Batista-Silva, W., Zsögön, A., Fernie, A. R., Araújo, W. L. & Nunes-Nesi, A. Plant domestication: setting biological clocks. Trends in Plant Science 28, 597–608 (2023).

Schlossarek, D., Zhang, Y. J., Sokolowska, E., Fernie, A. R., Luzarowski, M. & Skirycz, A. Don’t let go – co-fractionation mass spectrometry for untargeted mapping of protein-metabolite interactomes. The Plant Journal 113, 904–914 (2023).

Sreenivasulu, N., Alseekh, S., Tiozon, R. N., Graner, A., Martin, C. & Fernie, A. R. Metabolic Signatures from Genebank Collections: An Underexploited Resource for Human Health? Annual Review of Food Science and Technology 14, 183–202 (2023).

Zhu, F., Wen, W., Cheng, Y., Alseekh, S. & Fernie, A. R. Integrating multiomics data accelerates elucidation of plant primary and secondary metabolic pathways. aBIOTECH 4, 47–56 (2023).

Hayashi , K., Alseekh, S. & Fernie, A. R. Genetic and epigenetic control of the plant metabolome. Proteomics 23, (2023).

Rosado-Souza, L., Yokoyama, R., Sonnewald, U. & Fernie, A. R. Understanding source–sink interactions: Progress in model plants and translational research to crops. Molecular Plant 16, 96–121 (2023).

de Souza, L. P. & Fernie, A. R. Computational methods for processing and interpreting mass spectrometry-based metabolomics. Essays in Biochemistry 68, 5–13 (2023).

Wang, S., Qiang, Q., Xiang, L., Fernie, A. R. & Yang, J. Targeted approaches to improve tomato fruit taste. Horticulture Research 10, (2023).

Schwenkert, S., Fernie, A. R., Geigenberger, P., Leister, D., Möhlmann, T., Naranjo, B. & Neuhaus, H. E. Chloroplasts are key players to cope with light and temperature stress. Trends in Plant Science 27, 577–587 (2022).

Liu, Y. T., Fernie, A. R. & Tohge, T. Diversification of Chemical Structures of Methoxylated Flavonoids and Genes Encoding Flavonoid-O-Methyltransferases. Plants 11, (2022).

Gupta, K. J., Kaladhar, V. C., Fitzpatrick, T. B., Fernie, A. R., Møller, I. M. & Loake, G. J. Nitric oxide regulation of plant metabolism. Molecular Plant 15, 228–242 (2022).

Shen, S., Zhan, C., Yang, C., Fernie, A. R. & Luo, J. Metabolomics-centered mining of plant metabolic diversity and function: Past decade and future perspectives. Molecular Plant 16, 43–63 (2022).

Tiozon, R. J. N., Sartagoda, K. J. D., Fernie, A. R. & Sreenivasulu, N. The nutritional profile and human health benefit of pigmented rice and the impact of post-harvest processes and product development on the nutritional components: A review. Critical Reviews in Food Science and Nutrition 63, 3867–3894 (2021).

Zhang, Y. J. & Fernie, A. R. Stable and temporary enzyme complexes and metabolons involved in energy and redox metabolism. ANTIOXIDANTS & REDOX SIGNALING 35, 788–807 (2021).

Medeiros, D. B., Aarabi, F., Rivas f & Fernie, A. R. The knowns and unknowns of intracellular partitioning of carbon and nitrogen, with focus on the organic acid-mediated interplay between mitochondrion and chloroplast. Journal of Plant Physiology 266, (2021).

Wu, T., Kerbler, S. M., Fernie, A. R. & Zhang, Y. J. Plant cell cultures as heterologous bio-factories for secondary metabolite production. Plant Communications 2, (2021).