Publications of M. Bulut

Karakas, E., Bulut, M. & Fernie, A. R. Metabolome guided treasure hunt - lerning from metabolic diversity. Journal of Plant Physiology (2025). doi:10.1016/j.jplph.2025.154494

Fernie, A. R. & Bulut, M. SPOTLIGHT: Design of future climate smart crops by engineering heat stress-responsive gene expression. Molecular Plant (2025). doi:10.1016/j.molp.2025.03.012

Figueiredo, Y. G., Gasparini, K., Bulut, M., Fernie, A. R. & Zsögön, A. The genetic basis of prickle loss in the Solanaceae. Trends in Plant Science 30, (2025).

von Steimker, J., Tripodi, P., Wendenburg, R., Tringovska, I., Nankar, A. N., Stoeva, V., Pasev, G., Klemmer, A., Todorova, V., Bulut, M., Tikunov, Y., Bovy, A., Gechev, T., Kostova, D., Fernie, A. R. & Alseekh, S. The genetic architecture of the pepper metabolome and the biosynthesis of its signature capsianoside metabolites. Current Biology 34, 4209–4223 (2024).

Fernie, A. R. & Bulut, M. How cauliflower got its curd. Nature Genetics 56, 1042–1044 (2024).

Fernie, A. R. & Bulut, M. A delicate balance: transcriptional control of awn development and yield in barley. Trends in Plant Science 29, 946–947 (2024).

Bulut, M., Nunes-Nesi, A., Fernie, A. R. & Alseekh, S. Characterization of PetM cytochrome b6f subunit 7 domain-containing protein in tomato. Horticulture Research 10, (2023).

Aarabi, F., Ghigi, A., Wijesingha Ahchige, M., Bulut, M., Geigenberger, P., Neuhaus, H. E., Sampathkumar, A., Alseekh, S. & Fernie, A. R. Genome-Wide Association Study unveils ascorbate regulation by PAS/LOV PROTEIN during high light acclimation. Plant Physiology 193, 2037–2054 (2023).

Bulut, M., Wendenburg, R., Bitocchi, E., Bellucci, E., Kroc, M., Gioia, T., Susek, K., Papa, R., Fernie, A. R. & Alseekh, S. A Comprehensive Metabolomics and Lipidomics Atlas for the Legumes Common Bean, Chickpea, Lentil and Lupin. The Plant Journal 116, 1152–1171 (2023).

Zhang, Y. J., Martinez-Jaime, S., Bulut, M., Graf, A. & Fernie, A. R. The conditional mitochondrial protein complexome in Arabidopsis thaliana root and shoot. Plant Communications 4, (2023).

Aarabi, F., Salem, M. A., Arrivault, S., Bulut, M., Schöttler, M. A., Giavalisco, P., Fernie, A. R. & Hoefgen, R. The regulation of sulfolipids under sulfur starvation. Plant Molecular Biology 112, 195–198 (2023).

Bulut, M., Alseekh, S. & Fernie, A. R. Natural variation of respiration-related traits in plants. Plant Physiology 191, 2120–2132 (2023).

Alseekh, S., Kostova, D., Bulut, M. & Fernie, A. R. Genome-wide association studies: assessing trait characteristics in model and crop plants. Cellular and Molecular Life Sciences 78, 5743–5754 (2021).

Bulut, M., Fernie, A. R. & Alseekh, S. Large-scale Multi-omics Genome-wide Association Studies (Mo-GWAS): Guidelines for Sample Preparation and Normalization. Journal of Visualized Experiments 173, (2021).

Zhu, F., Bulut, M., Cheng, Y., Alseekh, S. & Fernie, A. R. in Methods in Molecular Biology 2642, 241–255 (2023).

Bulut, M. Chemodiversity of sulfur-containing metabolites emphasizing the ecophysiology of Allium plants and the developmental innovations in bulb formation. Current Opinion in Plant Biology 85, (2025).

Bulut, M., Karakas, E. & Fernie, A. R. Metabolic responses to multi-stress: An update. Plant Stress 15, (2025).

Alamillo, J. M., López, C. M., Martinez Rivas, F. J., Torralbo, F., Bulut, M. & Alseekh, S. Clustered regularly interspaced short palindromic repeats/CRISPR-associated protein and hairy roots: a perfect match for gene functional analysis and crop improvement. Current Opinion in Biotechnology 79, (2023).