All Publications

2751.

Journal Article

Lytovchenko, A.; Beleggia, R.; Schauer, N.; Isaacson, T.; Leuendorf, J. E.; Hellmann, H.; Rose, J. K. C.; Fernie, A. R.: Application of GC-MS for the detection of lipophilic compounds in diverse plant tissues. Plant Methods 5, p. 4 (2009)

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2752.

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Marchive, C.; Yehudai-Resheff, S.; Germain, A.; Fei, Z. J.; Jiang, X. S.; Judkins, J.; Wu, H.; Fernie, A. R.; Fait, A.; Stern, D. B.: Abnormal Physiological and Molecular Mutant Phenotypes Link Chloroplast Polynucleotide Phosphorylase to the Phosphorus Deprivation Response in Arabidopsis. Plant Physiology 151 (2), pp. 905 - 924 (2009)

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2753.

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Michalska, J.; Zauber, H.; Buchanan, B. B.; Cejudo, F. J.; Geigenberger, P.: NTRC links built-in thioredoxin to light and sucrose in regulating starch synthesis in chloroplasts and amyloplasts. Proceedings of the National Academy of Sciences of the United States of America 106 (24), pp. 9908 - 9913 (2009)

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2754.

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Mrosk, C.; Forner, S.; Hause, G.; Kuester, H.; Kopka, J.; Hause, B.: Composite Medicago truncatula plants harbouring Agrobacterium rhizogenes-transformed roots reveal normal mycorrhization by Glomus intraradices. Journal of Experimental Botany 60 (13), pp. 3797 - 3807 (2009)

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2755.

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Mutwil, M.; Ruprecht, C.; Giorgi, F. M.; Bringmann, M.; Usadel, B.; Persson, S.: Transcriptional Wiring of Cell Wall-Related Genes in Arabidopsis. Molecular Plant 2 (5), pp. 1015 - 1024 (2009)

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2756.

Journal Article

Myakushina, Y. A.; Milyaeva, E. L.; Romanov, G. A.; Nikiforova, V. Y.: Mutation in LSU4 gene affects flower development in Arabidopsis thaliana. Doklady Biochemistry and Biophysics 428 (1), pp. 257 - 260 (2009)

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2757.

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Naso, A.; Dreyer, I.; Pedemonte, L.; Testa, I.; Gomez-Porras, J. L.; Usai, C.; Mueller-Rueber, B.; Diaspro, A.; Gambale, F.; Picco, C.: The Role of the C-Terminus for Functional Heteromerization of the Plant Channel KDC1. Biophysical Journal 96 (10), pp. 4063 - 4074 (2009)

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2758.

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Nebrich, G.; Herrmann, M.; Hartl, D.; Diedrich, M.; Kreitler, T.; Wierling, C.; Klose, J.; Giavalisco, P.; Zabel, C.; Mao, L.: PROTEOMER: A workflow-optimized laboratory information management system for 2-D electrophoresis-centered proteomics. Proteomics 9 (7), pp. 1795 - 1808 (2009)

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2759.

Journal Article

Neupert, J.; Karcher, D.; Bock, R.: Generation of Chlamydomonas strains that efficiently express nuclear transgenes. Plant Journal 57 (6), pp. 1140 - 1150 (2009)

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2760.

Journal Article

Obel, N.; Erben, V.; Schwarz, T.; Kuehnel, S.; Fodor, A.; Pauly, M.: Microanalysis of Plant Cell Wall Polysaccharides. Molecular Plant 2 (5), pp. 922 - 932 (2009)

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2761.

Journal Article

Oey, M.; Lohse, M.; Kreikemeyer, B.; Bock, R.: Exhaustion of the chloroplast protein synthesis capacity by massive expression of a highly stable protein antibiotic. Plant Journal 57 (3), pp. 436 - 445 (2009)

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2762.

Journal Article

Oey, M.; Lohse, M.; Scharff, L. B.; Kreikemeyer, B.; Bock, R.: Plastid production of protein antibiotics against pneumonia via a new strategy for high-level expression of antimicrobial proteins. Proceedings of the National Academy of Sciences of the United States of America 106 (16), pp. 6579 - 6584 (2009)

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2763.

Journal Article

Osorio, S.; Tohge, T.; Fernie, A. R.: Application of metabolomic profiling for identififying valuable traits in tomato. CAB Reviews: Perspectives in Agriculture, Veterinary Science, Nutrition and Natural Resources 4 (024), pp. 1 - 9 (2009)

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2764.

Journal Article

Ott, T.; Sullivan, J.; James, E. K.; Flemetakis, E.; Gunther, C.; Gibon, Y.; Ronson, C.; Udvardi, M. K.: Absence of Symbiotic Leghemoglobins Alters Bacteroid and Plant Cell Differentiation During Development of Lotus japonicus Root Nodules. Molecular Plant-Microbe Interactions 22 (7), pp. 800 - 808 (2009)

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2765.

Journal Article

Pajerowska-Mukhtar, K.; Stich, B.; Achenbach, U.; Ballvora, A.; Lubeck, J.; Strahwald, J.; Tacke, E.; Hofferbert, H. R.; Ilarionova, E.; Bellin, D. et al.; Walkemeier, B.; Basekow, R.; Kersten, B.; Gebhardt, C.: Single Nucleotide Polymorphisms in the Allene Oxide Synthase 2 Gene Are Associated With Field Resistance to Late Blight in Populations of Tetraploid Potato Cultivars. Genetics 181 (3), pp. 1115 - 1127 (2009)

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2766.

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Palmieri, F.; Rieder, B.; Ventrella, A.; Blanco, E.; Do, P. T.; Nunes-Nesi, A.; Trauth, A. U.; Fiermonte, G.; Tjaden, J.; Agrimi, G. et al.; Kirchberger, S.; Paradies, E.; Fernie, A. R.; Neuhaus, H. E.: Molecular Identification and Functional Characterization of Arabidopsis thaliana Mitochondrial and Chloroplastic NAD(+) Carrier Proteins. The Journal of Biological Chemistry 284 (45), pp. 31249 - 31259 (2009)

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2767.

Journal Article

Pant, B. D.; Musialak-Lange, M.; Nuc, P.; May, P.; Buhtz, A.; Kehr, J.; Walther, D.; Scheible, W.-R.: Identification of Nutrient-Responsive Arabidopsis and Rapeseed MicroRNAs by Comprehensive Real-Time Polymerase Chain Reaction Profiling and Small RNA Sequencing. Plant Physiology 150 (3), pp. 1541 - 1555 (2009)

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2768.

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Pedreschi, R.; Franck, C.; Lammertyn, J.; Erban, A.; Kopka, J.; Hertog, M.; Verlinden, B.; Nicolai, B.: Metabolic profiling of 'Conference' pears under low oxygen stress. Postharvest Biology and Technology 51 (2), pp. 123 - 130 (2009)

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2769.

Journal Article

Pertl, H.; Schulze, W. X.; Obermeyer, G.: The Pollen Organelle Membrane Proteome Reveals Highly Spatial-Temporal Dynamics during Germination and Tube Growth of Lily Pollen. Journal of Proteome Research 8 (11), pp. 5142 - 5152 (2009)

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2770.

Journal Article

Piques, M.; Schulze, W. X.; Hoehne, M.; Usadel, B.; Gibon, Y.; Rohwer, J.; Stitt, M.: Ribosome and transcript copy numbers, polysome occupancy and enzyme dynamics in Arabidopsis. Molecular Systems Biology 5, p. 314 (2009)

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2771.

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Pivovarova, O.; Nikiforova, V. J.; Pfeiffer, A. F. H.; Rudovich, N.: The influence of genetic variations in HHEX gene on insulin metabolism in the German MESYBEPO cohort. Diabetes-Metabolism Research and Reviews 25 (2), pp. 156 - 162 (2009)

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2772.

Journal Article

Riano-Pachon, D. M.; Nagel, A.; Neigenfind, J.; Wagner, R.; Basekow, R.; Weber, E.; Mueller-Roeber, B.; Diehl, S.; Kersten, B.: GabiPD: the GABI primary database-a plant integrative 'omics' database. Nucleic Acids Research 37 (Database issue), pp. 954 - 959 (2009)

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2773.

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Rotter, A.; Camps, C.; Lohse, M.; Kappel, C.; Pilati, S.; Hren, M.; Stitt, M.; Coutos-Thevenot, P.; Moser, C.; Usadel, B. et al.; Delrot, S.; Gruden, K.: Gene expression profiling in susceptible interaction of grapevine with its fungal pathogen Eutypa lata: Extending MapMan ontology for grapevine. BMC Plant Biology 9, p. 104 (2009)

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2774.

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Scherling, C.; Ulrich, K.; Ewald, D.; Weckwerth, W.: A Metabolic Signature of the Beneficial Interaction of the Endophyte Paenibacillus sp Isolate and In Vitro-Grown Poplar Plants Revealed by Metabolomics. Molecular Plant-Microbe Interactions 22 (8), pp. 1032 - 1037 (2009)

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2775.

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Schroda, M.; Muehlhaus, T.: A 'foldosome' in the chloroplast? Plant Signaling & Behavior 4 (4), pp. 301 - 303 (2009)

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2776.

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Schroeder, C.; Bleidorn, C.; Hartmann, S.; Tiedemann, R.: Occurrence of Can-SINEs and intron sequence evolution supports robust phylogeny of pinniped carnivores and their terrestrial relatives. Gene 448 (2), pp. 221 - 226 (2009)

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2777.

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Schroeder, F.; Lisso, J.; Lange, P.; Muessig, C.: The extracellular EXO protein mediates cell expansion in Arabidopsis leaves. BMC Plant Biology 9, p. 20 (2009)

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2778.

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Skupin, A.; Falcke, M.: From puffs to global Ca2+ signals: How molecular properties shape global signals. Chaos 19 (3), p. 037111 (2009)

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2779.

Journal Article

Stegemann, S.; Bock, R.: Exchange of Genetic Material Between Cells in Plant Tissue Grafts. Science 324 (5927), pp. 649 - 651 (2009)

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2780.

Journal Article

Strodtkotter, I.; Padmasree, K.; Dinakar, C.; Speth, B.; Niazi, P. S.; Wojtera, J.; Voss, I.; Do, P. T.; Nunes-Nesi, A.; Fernie, A. R. et al.; Linke, V.; Raghavendra, A. S.; Scheibe, R.: Induction of the AOX1D Isoform of Alternative Oxidase in A-thaliana T-DNA Insertion Lines Lacking Isoform AOX1A Is Insufficient to Optimize Photosynthesis when Treated with Antimycin A. Molecular Plant 2 (2), pp. 284 - 297 (2009)

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2781.

Journal Article

Sulpice, R.; Pyl, E. T.; Ishihara, H.; Trenkamp, S.; Steinfath, M.; Witucka-Wall, H.; Gibon, Y.; Usadel, B.; Poree, F.; Piques, M. C. et al.; von Korff, M.; Steinhauser, M.-C.; Keurentjes, J. J. B.; Guenther, M.; Hoehne, M.; Selbig, J.; Fernie, A. R.; Altmann, T.; Stitt, M.: Starch as a major integrator in the regulation of plant growth. Proceedings of the National Academy of Sciences of the United States of America 106 (25), pp. 10348 - 10353 (2009)

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2782.

Journal Article

Szarzynska, B.; Sobkowiak, L.; Pant, B. D.; Balazadeh, S.; Scheible, W.-R.; Mueller-Roeber, B.; Jarmolowski, A.; Szweykowska-Kulinska, Z.: Gene structures and processing of Arabidopsis thaliana HYL1-dependent pri-miRNAs. Nucleic Acids Research 37 (9), pp. 3083 - 3093 (2009)

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2783.

Journal Article

Szymanski, J.; Jozefczuk, S.; Nikoloski, Z.; Selbig, J.; Nikiforova, V.; Catchpole, G.; Willmitzer, L.: Stability of Metabolic Correlations under Changing Environmental Conditions in Escherichia coli - A Systems Approach. PLoS One 4 (10), p. e7441 (2009)

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2784.

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Tohge, T.; Nunes-Nesi, A.; Fernie, A. R.: Finding the paths -metabolomics and approaches to metabolic flux analysis for defining metabolic pathways and their regulation. Biochemist 31, pp. 2 - 6 (2009)

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2785.

Journal Article

Trenkamp, S.; Eckes, P.; Busch, M.; Fernie, A. R.: Temporally resolved GC-MS-based metabolic profiling of herbicide treated plants treated reveals that changes in polar primary metabolites alone can distinguish herbicides of differing mode of action. Metabolomics 5 (3), pp. 277 - 291 (2009)

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2786.

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Usadel, B.; Poree, F.; Nagel, A.; Lohse, M.; Czedik-Eysenberg, A.; Stitt, M.: A guide to using MapMan to visualize and compare Omics data in plants: a case study in the crop species, Maize. Plant Cell and Environment 32 (9), pp. 1211 - 1229 (2009)

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2787.

Journal Article

Valkov, V. T.; Scotti, N.; Kahlau, S.; MacLean, D.; Grillo, S.; Gray, J. C.; Bock, R.; Cardi, T.: Genome-Wide Analysis of Plastid Gene Expression in Potato Leaf Chloroplasts and Tuber Amyloplasts: Transcriptional and Posttranscriptional Control. Plant Physiology 150 (4), pp. 2030 - 2044 (2009)

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2788.

Journal Article

van der Ent, S.; van Hulten, M.; Pozo, M. J.; Czechowski, T.; Udvardi, M. K.; Pieterse, C. M. J.; Ton, J.: Priming of plant innate immunity by rhizobacteria and beta-aminobutyric acid: differences and similarities in regulation. New Phytologist 183 (2), pp. 419 - 431 (2009)

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2789.

Journal Article

van der Merwe, M. J.; Osorio, S.; Moritz, T.; Nunes-Nesi, A.; Fernie, A. R.: Decreased Mitochondrial Activities of Malate Dehydrogenase and Fumarase in Tomato Lead to Altered Root Growth and Architecture via Diverse Mechanisms. Plant Physiology 149 (2), pp. 653 - 669 (2009)

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2790.

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van Dongen, J. T.; Frohlich, A.; Ramirez-Aguilar, S. J.; Schauer, N.; Fernie, A. R.; Erban, A.; Kopka, J.; Clark, J.; Langer, A.; Geigenberger, P.: Transcript and metabolite profiling of the adaptive response to mild decreases in oxygen concentration in the roots of arabidopsis plants. Annals of Botany 103 (2), pp. 269 - 280 (2009)

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2791.

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Villar, C. B. R.; Erilova, A.; Makarevich, G.; Trösch, R.; Köhler, C.: Control of PHERES1 Imprinting in Arabidopsis by Direct Tandem Repeats. Molecular Plant 2 (4), pp. 654 - 660 (2009)

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2792.

Journal Article

Voll, L. M.; Hajirezaei, M.-R.; Czogalla-Peter, C.; Lein, W.; Stitt, M.; Sonnewald, U.; Bornke, F.: Antisense inhibition of enolase strongly limits the metabolism of aromatic amino acids, but has only minor effects on respiration in leaves of transgenic tobacco plants. New Phytologist 184 (3), pp. 607 - 618 (2009)

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2793.

Journal Article

Wang, H.; Schauer, N.; Usadel, B.; Frasse, P.; Zouine, M.; Hernould, M.; Latche, A.; Pech, J. C.; Fernie, A. R.; Bouzayen, M.: Regulatory Features Underlying Pollination-Dependent and -Independent Tomato Fruit Set Revealed by Transcript and Primary Metabolite Profiling. The Plant Cell 21 (5), pp. 1428 - 1452 (2009)

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2794.

Journal Article

Weigelt, K.; Kuester, H.; Rutten, T.; Fait, A.; Fernie, A. R.; Miersch, O.; Wasternack, C.; Emery, R. J. N.; Desel, C.; Hosein, F. et al.; Mueller, M.; Saalbach, I.; Weber, H.: ADP-Glucose Pyrophosphorylase-Deficient Pea Embryos Reveal Specific Transcriptional and Metabolic Changes of Carbon-Nitrogen Metabolism and Stress Responses. Plant Physiology 149 (1), pp. 395 - 411 (2009)

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2795.

Journal Article

Wirth, J.; Poletti, S.; Aeschlimann, B.; Yakandawala, N.; Drosse, B.; Osorio, S.; Tohge, T.; Fernie, A. R.; Gunther, D.; Gruissem, W. et al.; Sautter, C.: Rice endosperm iron biofortification by targeted and synergistic action of nicotianamine synthase and ferritin. Plant Biotechnology Journal 7 (7), pp. 631 - 644 (2009)

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2796.

Journal Article

Yazdanbakhsh, N.; Fisahn, J.: High throughput phenotyping of root growth dynamics, lateral root formation, root architecture and root hair development enabled by PlaRoM. Functional Plant Biology 36 (10-11), pp. 938 - 946 (2009)

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2797.

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Zabalza, A.; van Dongen, J. T.; Froehlich, A.; Oliver, S. N.; Faix, B.; Gupta, K. J.; Schmalzlin, E.; Igal, M.; Orcaray, L.; Royuela, M. et al.; Geigenberger, P.: Regulation of Respiration and Fermentation to Control the Plant Internal Oxygen Concentration. Plant Physiology 149 (2), pp. 1087 - 1098 (2009)

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2798.

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Zanor, M. I.; Osorio, S.; Nunes-Nesi, A.; Carrari, F.; Lohse, M.; Usadel, B.; Kuehn, C.; Bleiss, W.; Giavalisco, P.; Willmitzer, L. et al.; Sulpice, R.; Zhou, Y. H.; Fernie, A. R.: RNA Interference of LIN5 in Tomato Confirms Its Role in Controlling Brix Content, Uncovers the Influence of Sugars on the Levels of Fruit Hormones, and Demonstrates the Importance of Sucrose Cleavage for Normal Fruit Development and Fertility. Plant Physiology 150 (3), pp. 1204 - 1218 (2009)

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2799.

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Zanor, M. I.; Rambla, J. L.; Chaib, J.; Steppa, A.; Medina, A.; Granell, A.; Fernie, A. R.; Causse, M.: Metabolic characterization of loci affecting sensory attributes in tomato allows an assessment of the influence of the levels of primary metabolites and volatile organic contents. Journal of Experimental Botany 60 (7), pp. 2139 - 2154 (2009)

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2800.

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Zhang, S.; Sun, L.; Kragler, F.: The phloem-delivered RNA pool contains small noncoding RNAs and interferes with translation. Plant Physiology 150 (1), pp. 378 - 387 (2009)

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Journal Article (4085)