Publications of Alisdair Fernie

Max Planck Institute of Molecular Plant Physiology

Journal Article (1113)

551.

Journal Article

Yoshida, T.; Obata, T.; Feil, R.; Lunn, J. E.; Fujita, Y.; Yamaguchi-Shinozaki, K.; Fernie, A. R.: The Role of Abscisic Acid Signaling in Maintaining the Metabolic Balance Required for Arabidopsis Growth under Nonstress Conditions. The Plant Cell 31 (1), pp. 84 - 105 (2019)

MPG.PuRe

552.

Journal Article

Zeng, X.; Yuan, H.; Dong, X.; Peng, M.; Jing, X.; Xu, Q.; Tang, T.; Wang, Y.; Zha, S.; Gao, M. et al.; Li, C.; Shu, C.; Wei, Z.; Qimei, W.; Basang, Y.; Dunzhu, J.; Li, Z.; Bai, L.; Shi, J.; Zheng, Z.; Yu, S.; Fernie, A. R.; Luo, J.; Nyima, T.: Genome-wide dissection of co-selected UV-B responsive pathways in the UV-B adaptation of qingke. Molecular Plant 13 (1), pp. 112 - 127 (2019)

MPG.PuRe

553.

Journal Article

Zhan, W.; Liu, J.; Pan, Q.; Wang, H.; Yan, S.; Li, K.; Deng, M.; Li, N.; Liu, N.; Kong, Q. et al.; Fernie, A. R.; Yan, J.: An allele of ZmPORB2 encoding a protochlorophyllide oxidoreductase promotes tocopherol accumulation in both leaves and kernels of maize. The Plant Journal 100 (1), pp. 114 - 127 (2019)

MPG.PuRe

554.

Journal Article

Zhang, Y.; Natale, R.; Domingues Júnior, A.P.; Toleco, M.R.; Siemiatkowska, B.; Fàbregas, N.; Fernie, A. R.: Rapid Identification of Protein-Protein Interactions in Plants. Current Protocols in Plant Biology 4 (4), e20099 (2019)

MPG.PuRe

555.

Journal Article

Zhu, F.; Wen, W.; Fernie, A. R.: Finding Noemi: The Transcription Factor Mutations Underlying Trait Differentiation Amongst Citrus. Trends in Plant Science 24 (5), pp. 384 - 386 (2019)

MPG.PuRe

556.

Journal Article

Zhu, J.; Lau, K.; Puschmann, R.; Harmel, R.K.; Zhang, Y.; Pries, V.; Gaugler, P.; Broger, L.; Dutta, A.K.; Jessen, H.J. et al.; Schaaf, G.; Fernie, A. R.; Hothorn, L.A.; Fiedler, D.; Hothorn, M.: Two bifunctional inositol pyrophosphate kinases/phosphatases control plant phosphate homeostasis. eLife 8, e43562 (2019)

MPG.PuRe

557.

Journal Article

Alseekh, S.; Bermudez, L.; de Haro, L. A.; Fernie, A. R.; Carrari, F.: Crop metabolomics: from diagnostics to assisted breeding. Metabolomics 14 (11), 148 (2018)

MPG.PuRe

558.

Journal Article

Brandt, S.; Fachinger, S.; Tohge, T.; Fernie, A. R.; Braun, H.-P.; Hildebrandt, T. M.: Extended darkness induces internal turnover of glucosinolates in Arabidopsis thaliana leaves. PLoS One 13 (8), pp. 1 - 15 (2018)

MPG.PuRe

559.

Journal Article

Fernie, A. R.: Extending the cascade: identification of a mitogen-activated protein kinase phosphatase playing a key role in rice yield. The Plant Journal 95 (6), pp. 935 - 936 (2018)

MPG.PuRe

560.

Journal Article

Kumar, P.; Garrido, E.; Zhao, K.; Zheng, Y.; Alseekh, S.; Vargas-Ortiz, E.; Fernie, A. R.; Fei, Z.; Poveda, K.; Jander, G.: Tecia solanivora infestation increases tuber starch accumulation in Pastusa Suprema potatoes. Journal of Integrative Plant Biology 60 (11), pp. 1083 - 1096 (2018)

MPG.PuRe

561.

Journal Article

Tohge, T.; Borghi, M.; Fernie, A. R.: The natural variance of the Arabidopsis floral secondary metabolites. Scientific Data 5, 180051 (2018)

MPG.PuRe

562.

Journal Article

Alhajturki, D.; Muralidharan, S.; Nurmi, M.; Rowan, B. A.; Lunn, J. E.; Boldt, H.; Salem, M.A.; Alseekh, S.; Jorzig, C.; Feil, R. et al.; Giavalisco, P.; Fernie, A. R.; Weigel, D.; Laitinen, R.: Dose-dependent interactions between two loci trigger altered shoot growth in BG-5 × Krotzenburg-0 (Kro-0) hybrids of Arabidopsis thaliana. New Phytologist 217 (1), pp. 392 - 406 (2018)

MPG.PuRe

563.

Journal Article

Alseekh, S.; Fernie, A. R.: Metabolomics 20 years on: what have we learned and what hurdles remain? The Plant Journal 94 (6), pp. 933 - 942 (2018)

MPG.PuRe

564.

Journal Article

Andersson, M.; Turesson, H.; Arrivault, S.; Zhang, Y.; Fält, A.-S.; Fernie, A. R.; Hofvander, P.: Inhibition of plastid PPase and NTT leads to major changes in starch and tuber formation in potato. Journal of Experimental Botany 69 (8), pp. 1913 - 1924 (2018)

MPG.PuRe

565.

Journal Article

Arif, M.A.; Alseekh, S.; Harb, J.; Fernie, A. R.; Frank, W.: Abscisic acid, cold and salt stimulate conserved metabolic regulation in the moss Physcomitrella patens. Plant Biology 20 (6), pp. 1014 - 1022 (2018)

MPG.PuRe

566.

Journal Article

Avin-Wittenberg, T.; Baluška, F.; Bozhkov, P.V.; Elander, P.H.; Fernie, A. R.; Galili, G.; Hassan, A.; Hofius, D.; Isono, E.; Le Bars, R. et al.; Masclaux-Daubresse, C.; Minina, E.A.; Peled-Zehavi, H.; Coll, N.S.; Sandalio, L.M.; Satiat-Jeunemaitre, B.; Sirko, A.; Testillano, P.S.; Batoko, H.: Autophagy-related approaches for improving nutrient use efficiency and crop yield protection. Journal of Experimental Botany 69 (6), pp. 1335 - 1353 (2018)

MPG.PuRe

567.

Journal Article

Avin-Wittenberg, T.; Baluska, F.; Bozhkov, P. V.; Elander, P. H.; Fernie, A. R.; Galili, G.; Hassan, A.; Hofius, D.; Isono, E.; Le Bars, R. et al.; Masclaux-Daubresse, C.; Minina, E. A.; Peled-Zehavi, H.; Coll, N. S.; Sandalio, L. M.; Satiat-Jeunemaitre, B.; Sirko, A.; Testillano, P. S.; Batoko, H.: Corrigendum: Autophagy-related approaches for improving nutrient use efficiency and crop yield protection. Journal of Experimental Botany 69 (12), p. 3173 - 3173 (2018)

MPG.PuRe

568.

Journal Article

Basler, G.; Fernie, A. R.; Nikoloski, Z.: Advances in metabolic flux analysis toward genome-scale profiling of higher organisms. Bioscience Reports 38 (6), 6 (2018)

MPG.PuRe

569.

Journal Article

Bermúdez, L.; Del Pozo, T.; Silvestre Lira, B.; de Godoy, F.; Boos, I.; Romanò, C.; Previtali, V.; Almeida, J.; Bréhélin, C.; Asis, R. et al.; Quadrana, L.; Demarco, D.; Alseekh, S.; Salinas Gamboa, R.; Pérez-Flores, L.; Dominguez, P.G.; Rothan, C.; Fernie, A. R.; González, M.; Stocker, A.; Hemmerle, A.; Clausen, M.H.; Carrari, F.; Rossi, M.: A Tomato Tocopherol-Binding Protein Sheds Light on Intracellular α-Tocopherol Metabolism in Plants. Plant and Cell Physiology 59 (11), pp. 2188 - 2203 (2018)

MPG.PuRe

570.

Journal Article

Bustamante, C. A.; Brotman, Y.; Monti, L. L.; Gabilondo, J.; Budde, C. O.; Lara, M. V.; Fernie, A. R.; Drincovich, M. F.: Differential lipidome remodeling during postharvest of peach varieties with different susceptibility to chilling injury. Physiologia Plantarum 163 (1), pp. 2 - 17 (2018)

MPG.PuRe

571.

Journal Article

Cavalcanti, J.H.F.; Kirma, M.; Barros, J.A.S.; Quinhones, C.G.S.; Pereira-Lima, Í.; Obata, T.; Nunes-Nesi, A.; Galili, G.; Fernie, A. R.; Avin-Wittenberg, T. et al.; Araújo, W.L.: An L,L-diaminopimelate aminotransferase mutation leads to metabolic shifts and growth inhibition in Arabidopsis. Journal of Experimental Botany 69 (22), pp. 5489 - 5506 (2018)

MPG.PuRe

572.

Journal Article

Chen, J.; Wang, J.; Chen, W.; Sun, W.; Peng, M.; Yuan, Z.; Shen, S.; Xie, K.; Jin, C.; Sun, Y. et al.; Liu, X.; Fernie, A. R.; Yu, S.; Luo, J.: Metabolome Analysis of Multi-Connected Biparental Chromosome Segment Substitution Line Populations. Plant Physiology 178 (2), pp. 612 - 625 (2018)

MPG.PuRe

573.

Journal Article

Cubillos, A.; Tong, H.; Alseekh, S.; de Abreu e Lima, F.; Yu, J.; Fernie, A. R.; Nikoloski, Z.; Laitinen, R.: Inheritance patterns in metabolism and growth in diallel crosses of Arabidopsis thaliana from a single growth habitat. Heredity 120, pp. 463 - 473 (2018)

MPG.PuRe

574.

Journal Article

Cui, X.; Wang, Y.; Ren, Y.; Fernie, A. R.; Alseekh, S.; He, H.; Gong, G.; Zhang, H.; Guo, S.; Zhang, J. et al.; Xu, Y.: Variance analysis of metabolite components between low sugar wild and high sugar cultivated watermelon fruits. Acta Horticulturae Sinica 45 (4), pp. 775 - 783 (2018)

MPG.PuRe

575.

Journal Article

de Oliveira Silva, F. M.; Lichtenstein, G.; Alseekh, S.; Rosado-Souza, L.; Conte, M.; Suguiyama, V. F.; Lira, B. S.; Fanourakis, D.; Usadel, B.; Bhering, L. L. et al.; DaMatta, F. M.; Sulpice, R.; Araújo, W. L.; Rossi, M.; de Setta, N.; Fernie, A. R.; Carrari, F.; Nunes-Nesi, A.: The genetic architecture of photosynthesis and plant growth-related traits in tomato. Plant, Cell and Environment 41 (2), pp. 327 - 341 (2018)

MPG.PuRe

576.

Journal Article

Del-Saz, N. F.; Ribas-Carbo, M.; McDonald, A. E.; Lambers, H.; Fernie, A. R.; Florez-Sarasa, I. D.: An In Vivo Perspective of the Role(s) of the Alternative Oxidase Pathway. Trends in Plant Science 23 (3), pp. 206 - 219 (2018)

MPG.PuRe

577.

Journal Article

Durgud, M.; Gupta, S.; Ivanov, I.; Omidbakhshfard, M. A.; Benina, M.; Alseekh, S.; Staykov, N.; Hauenstein, M.; Dijkwel, P. P.; Hortensteiner, S. et al.; Toneva, V.; Brotman, Y.; Fernie, A. R.; Mueller-Roeber, B.; Gechev, T. S.: Molecular Mechanisms Preventing Senescence in Response to Prolonged Darkness in a Desiccation-Tolerant Plant. Plant Physiology 177 (3), pp. 1319 - 1338 (2018)

MPG.PuRe

578.

Journal Article

El Aou-ouad, H.; Bota, J.; Obata, T.; Montero, R.; Fernie, A. R.; Medrano, H.; Pou, A.; Florez-Sarasa, I. D.: Combined drought and virus infection trigger aspects of respiratory metabolism related to grapevine physiological responses. Journal of Plant Physiology 231, pp. 19 - 30 (2018)

MPG.PuRe

579.

Journal Article

Fàbregas, N.; Lozano-Elena, F.; Blasco-Escámez, D.; Tohge, T.; Martínez-Andújar, C.; Albacete, A.; Osorio, S.; Bustamante, M.; Riechmann, J. L.; Nomura, T. et al.; Yokota, T.; Conesa, A.; Alfocea, F. P.; Fernie, A. R.; Caño-Delgado, A. I.: Overexpression of the vascular brassinosteroid receptor BRL3 confers drought resistance without penalizing plant growth. Nature Communications 9 (1), 4680 (2018)

MPG.PuRe

580.

Journal Article

Fernie, A. R.; Alseekh, S.: Defining the convergence of ethylene and auxin signaling in tomato. New Phytologist 219 (2), pp. 479 - 481 (2018)

MPG.PuRe

581.

Journal Article

Fernie, A. R.; Zhang, Y.; Sweetlove, L. J.: Passing the Baton: Substrate Channelling in Respiratory Metabolism. Research 2018, 1539325 (2018)

MPG.PuRe

582.

Journal Article

Gakiere, B.; Fernie, A. R.; Petriacq, P.: More to NAD(+) than meets the eye: A regulator of metabolic pools and gene expression in Arabidopsis. Free Radical Biology and Medicine 122, pp. 86 - 95 (2018)

MPG.PuRe

583.

Journal Article

Gakière, B.; Hao, J.; de Bont, L.; Pétriacq, P.; Nunes-Nesi, A.; Fernie, A. R.: NAD+ Biosynthesis and Signaling in Plants. Critical Reviews in Plant Sciences 37 (4), pp. 259 - 307 (2018)

MPG.PuRe

584.

Journal Article

Garbowicz, K.; Liu, Z.; Alseekh, S.; Tieman, D.; Taylor, M.; Kuhalskaya, A.; Ofner, I.; Zamir, D.; Klee, H. J.; Fernie, A. R. et al.; Brotman, Y.: Quantitative Trait Loci Analysis Identifies a Prominent Gene Involved in the Production of Fatty Acid-Derived Flavor Volatiles in Tomato. Molecular Plant 11 (9), pp. 1147 - 1165 (2018)

MPG.PuRe

585.

Journal Article

Hsueh, Y.-C.; Nicolaisen, K.; Gross, L.E.; Nöthen, J.; Schauer, N.; Vojta, L.; Ertel, F.; Koch, I.; Ladig, R.; Fulgosi, H. et al.; Fernie, A. R.; Schleiff, E.: The outer membrane Omp85-like protein P39 influences metabolic homeostasis in mature Arabidopsis thaliana. Plant Biology 20 (5), pp. 825 - 833 (2018)

MPG.PuRe

586.

Journal Article

Huang, L.; Pyc, M.; Alseekh, S.; McCarty, D. R.; de Crecy-Lagard, V.; Gregory III, J. F.; Henry, C. S.; Fernie, A. R.; Mullen, R. T.; Hanson, A. D.: A plastidial pantoate transporter with a potential role in pantothenate synthesis. Biochemical Journal 475, pp. 813 - 825 (2018)

MPG.PuRe

587.

Journal Article

Inostroza-Blancheteau, C.; de Oliveira Silva, F.M.; Durán, F.; Solano, J.; Obata, T.; Machado, M.; Fernie, A. R.; Reyes-Díaz, M.; Nunes-Nesi, A.: Metabolic diversity in tuber tissues of native Chiloé potatoes and commercial cultivars of Solanum tuberosum ssp. tuberosum L. Metabolomics 14 (10), 138 (2018)

MPG.PuRe

588.

Journal Article

Kamranfar, I.; Xue, G.-P.; Tohge, T.; Sedaghatmehr, M.; Fernie, A. R.; Balazadeh, S.; Mueller-Roeber, B.: Transcription factor RD26 is a key regulator of metabolic reprogramming during dark-induced senescence. New Phytologist 218 (4), pp. 1543 - 1557 (2018)

MPG.PuRe

589.

Journal Article

Kong, F.; Burlacot, A.; Liang, Y.; Legeret, B.; Alseekh, S.; Brotman, Y.; Fernie, A. R.; Krieger-Liszkay, A.; Beisson, F.; Peltier, G. et al.; Li-Beisson, Y.: Interorganelle Communication: Peroxisomal MALATE DEHYDROGENASE2 Connects Lipid Catabolism to Photosynthesis through Redox Coupling in Chlamydomonas. Plant Cell 30 (8), pp. 1824 - 1847 (2018)

MPG.PuRe

590.

Journal Article

Kou, S.; Chen, L.; Tu, W.; Scossa, F.; Wang, Y.; Liu, J.; Fernie, A. R.; Song, B.; Xie, C.: The arginine decarboxylase gene ADC1, associated to the putrescine pathway, plays an important role in potato cold-acclimated freezing tolerance as revealed by transcriptome and metabolome analyses. The Plant Journal 96 (6), pp. 1283 - 1298 (2018)

MPG.PuRe

591.

Journal Article

Lima, V. F.; de Souza, L. P.; Williams, T. C. R.; Fernie, A. R.; Daloso, D. M.: Gas Chromatography–Mass Spectrometry-Based 13C-Labeling Studies in Plant Metabolomics. Methods in Molecular Biology 1778, pp. 47 - 58 (2018)

MPG.PuRe

592.

Journal Article

Lima, V. F.; Medeiros, D.B.; Dos Anjos, L.; Gago, J.; Fernie, A. R.; Daloso, D. M.: Toward multifaceted roles of sucrose in the regulation of stomatal movement. Plant Signaling & Behavior 13 (8), e1494468 (2018)

MPG.PuRe

593.

Journal Article

Lorenz, C.; Brandt, S.; Borisjuk, L.; Rolletschek, H.; Heinzel, N.; Tohge, T.; Fernie, A. R.; Braun, H.-P.; Hildebrandt, T. M.: The Role of Persulfide Metabolism During Arabidopsis Seed Development Under Light and Dark Conditions. Frontiers in Plant Science 9, 1381 (2018)

MPG.PuRe

594.

Journal Article

Ma, X.; Zhang, Y.; Tureckova, V.; Xue, G.-P.; Fernie, A. R.; Mueller-Roeber, B.; Balazadeh, S.: The NAC Transcription Factor SlNAP2 Regulates Leaf Senescence and Fruit Yield in Tomato. Plant Physiology 177 (3), pp. 1286 - 1302 (2018)

MPG.PuRe

595.

Journal Article

Martins, A. O.; Nunes-Nesi, A.; Arauj, W. L.; Fernie, A. R.: To Bring Flowers or Do a Runner: Gibberellins Make the Decision. Molecular Plant 11 (1), pp. 4 - 6 (2018)

MPG.PuRe

596.

Journal Article

Medeiros, D.B.; de Souza, L. P.; Antunes, W. C.; Araujo, W. L.; Daloso, D. M.; Fernie, A. R.: Sucrose breakdown within guard cells provides substrates for glycolysis and glutamine biosynthesis during light-induced stomatal opening. The Plant Journal 94 (4), pp. 583 - 594 (2018)

MPG.PuRe

597.

Journal Article

Medeiros, D.B.; Fernie, A. R.; Araujo, W. L.: Discriminating the Function(s) of Guard Cell ALMT Channels. Trends in Plant Science 23 (8), pp. 649 - 651 (2018)

MPG.PuRe

598.

Journal Article

Monné, M.; Daddabbo, L.; Gagneul, D.; Obata, T.; Hielscher, B.; Palmieri, L.; Miniero, D. V.; Fernie, A. R.; Weber, A. P. M.; Palmieri, F.: Uncoupling proteins 1 and 2 (UCP1 and UCP2) from Arabidopsis thaliana are mitochondrial transporters of aspartate, glutamate, and dicarboxylates. The Journal of Biological Chemistry 293 (11), pp. 4213 - 4227 (2018)

MPG.PuRe

599.

Journal Article

Nietzsche, M.; Guerra, T.; Alseekh, S.; Wiermer, M.; Sonnewald, S.; Fernie, A. R.; Börnkea, F.: STOREKEEPER RELATED1/G-element binding protein (STKR1) interacts with protein kinase SnRK1. Plant Physiology 176 (2), pp. 1773 - 1792 (2018)

MPG.PuRe

600.

Journal Article

Rabêlo, F. H. S.; Fernie, A. R.; Navazas, A.; Borgo, L.; Keunen, E.; de da Silva, B. K. A.; Cuypers, A.; Lavres, J.: A glimpse into the effect of sulfur supply on metabolite profiling, glutathione and phytochelatins in Panicum maximum cv. Massai exposed to cadmium. Environmental and Experimental Botany 151, pp. 76 - 88 (2018)

MPG.PuRe