Publications of Alisdair Fernie
Journal Article (39)
1.
Journal Article
19, Part B (0), pp. 295 - 313 (2014)
The life of plant mitochondrial complex I. Mitochondrion 2.
Journal Article
46 (9), pp. 1034 - 1038 (2014)
The genome of the stress-tolerant wild tomato species Solanum pennellii. Nature Genetics 3.
Journal Article
56 (9), pp. 864 - 875 (2014)
Metabolomics-assisted refinement of the pathways of steroidal glycoalkaloid biosynthesis in the tomato clade. Journal of Integrative Plant Biology 4.
Journal Article
65 (14), pp. 3975 - 3992 (2014)
Reversal of senescence by N resupply to N-starved Arabidopsis thaliana: transcriptomic and metabolomic consequences. Journal of Experimental Botany 5.
Journal Article
165 (3), pp. 978 - 990 (2014)
Lipoate-Protein Ligase and Octanoyltransferase Are Essential for Protein Lipoylation in Mitochondria of Arabidopsis1[W][OPEN]. Plant Physiology 6.
Journal Article
165 (3), pp. 1120 - 1132 (2014)
Genome-Wide Association in Tomato Reveals 44 Candidate Loci for Fruit Metabolic Traits. Plant Physiology 7.
Journal Article
26 (5), pp. 1901 - 1912 (2014)
Decreased Nucleotide and Expression Diversity and Modified Coexpression Patterns Characterize Domestication in the Common Bean. The Plant Cell 8.
Journal Article
55 (5), pp. 881 - 896 (2014)
Suppression of NDA-Type Alternative Mitochondrial NAD(P)H Dehydrogenases in Arabidopsis thaliana Modifies Growth and Metabolism, but not High Light Stimulation of Mitochondrial Electron Transport. Plant and Cell Physiology 9.
Journal Article
9 (4), e94862 (2014)
In High-Light-Acclimated Coffee Plants the Metabolic Machinery Is Adjusted to Avoid Oxidative Stress Rather than to Benefit from Extra Light Enhancement in Photosynthetic Yield. PLoS One 10.
Journal Article
5, 3537 (2014)
Metabolic efficiency underpins performance trade-offs in growth of Arabidopsis thaliana. Nature Communications 11.
Journal Article
164 (2), pp. 907 - 921 (2014)
Double Knockout Mutants of Arabidopsis Grown under Normal Conditions Reveal that the Plastidial Phosphorylase Isozyme Participates in Transitory Starch Metabolism. Plant Physiology 12.
Journal Article
1090, pp. 107 - 119 (2014)
Analysis of Kinetic Labeling of Amino Acids and Organic Acids by GC-MS. Methods in molecular biology 13.
Journal Article
13 (9), pp. 2246 - 2259 (2014)
Dissecting the Subcellular Compartmentation of Proteins and Metabolites in Arabidopsis Leaves Using Non-aqueous Fractionation. Molecular and Cellular Proteomics 14.
Journal Article
7 (8), pp. 1257 - 1260 (2014)
At Long Last: Evidence for Pexophagy in Plants. Molecular Plant 15.
Journal Article
65 (9), pp. 2351 - 63 (2014)
The transcription factor AREB1 regulates primary metabolic pathways in tomato fruits. Journal of Experimental Botany 16.
Journal Article
77 (5), pp. 676 - 687 (2014)
Silencing of the tomato Sugar Partitioning Affecting protein (SPA), modifies sink strength through a shift in leaf sugar metabolism. The Plant Journal 17.
Journal Article
6 (10), pp. 2830 - 48 (2014)
Evolution and functional implications of the tricarboxylic acid cycle as revealed by phylogenetic analysis. Genome biology and evolution 18.
Journal Article
166 (4), pp. 1821 - 38 (2014)
Virus-Induced Alterations in Primary Metabolism Modulate Susceptibility to Tobacco rattle virus in Arabidopsis. Plant Physiology 19.
Journal Article
7 (5 - SI), pp. 893 - 911 (2014)
Analysis of Short-Term Metabolic Alterations in Arabidopsis Following Changes in the Prevailing Environmental Conditions. Molecular Plant 20.
Journal Article
56 (9 - SI), pp. 941 - 959 (2014)
Analysis of metabolic alterations in Arabidopsis following changes in the carbon dioxide and oxygen partial pressures. Journal of Integrative Plant Biology 21.
Journal Article
226, pp. 108 - 119 (2014)
Opportunities for improving leaf water use efficiency under climate change conditions. Plant Science 22.
Journal Article
9 (8), pp. 1803 - 1824 (2014)
Flux profiling of photosynthetic carbon metabolism in intact plants. Nature Protocols 23.
Journal Article
4, 5067 (2014)
Metabolic variation between japonica and indica rice cultivars as revealed by non-targeted metabolomics. Scientific Reports 24.
Journal Article
164 (1), pp. 55 - 68 (2014)
Conserved Changes in the Dynamics of Metabolic Processes during Fruit Development and Ripening across Species. Plant Physiology 25.
Journal Article
164, pp. 1406 - 1412 (2014)
The Arabidopsis class II sirtuin is a lysine deacetylase and interacts with mitochondrial energy metabolism. Plant Physiology 26.
Journal Article
37 (5), pp. 1250 - 1258 (2014)
Mercator: a fast and simple web server for genome scale functional annotation of plant sequence data. Plant Cell Environment 27.
Journal Article
9 (11), e112468 (2014)
Reduction of the Cytosolic Phosphoglucomutase in Arabidopsis Reveals Impact on Plant Growth, Seed and Root Development, and Carbohydrate Partitioning. PLoS One 28.
Journal Article
7 (1), pp. 248 - 251 (2014)
Is There a Metabolic Requirement for Photorespiratory Enzyme Activities in Heterotrophic Tissues? Molecular Plant 29.
Journal Article
5, 4027 (2014)
Natural occurring epialleles determine vitamin E accumulation in tomato fruits. Nature Communications 30.
Journal Article
Transcript and Metabolite Profiling for the Evaluation of Tobacco Tree and Poplar as Feedstock for the Bio-based Industry. Journal of visualized experiments: JoVE (87), e51393 (2014)
31.
Journal Article
165 (4), pp. 1684 - 1697 (2014)
Water Balance, Hormone Homeostasis, and Sugar Signaling Are All Involved in Tomato Resistance to Tomato Yellow Leaf Curl Virus. Plant Physiology 32.
Journal Article
65 (6), pp. 1619 - 1636 (2014)
The essential role of sugar metabolism in the acclimation response of Arabidopsis thaliana to high light intensities. Journal of Experimental Botany 33.
Journal Article
14, 309 (2014)
Consequences of induced brassinosteroid deficiency in Arabidopsis leaves. BMC Plant Biology 34.
Journal Article
10 (6), e1003656 (2014)
Variability of Metabolite Levels Is Linked to Differential Metabolic Pathways in Arabidopsis's Responses to Abiotic Stresses. PLoS Computational Biology 35.
Journal Article
966, pp. 7 - 20 (2014)
Genome‐enabled plant metabolomics. Journal of Chromatography B: Analytical Technologies in the Biomedical and Life Sciences 36.
Journal Article
7 (9), pp. 1403 - 1405 (2014)
Biosynthesis of the Essential Respiratory Cofactor Ubiquinone from Phenylalanine in Plants. Molecular Plant 37.
Journal Article
7 (2), pp. 356 - 368 (2014)
Suppression of the External Mitochondrial NADPH Dehydrogenase, NDB1, in Arabidopsis thaliana Affects Central Metabolism and Vegetative Growth. Molecular Plant 38.
Journal Article
32 (11), pp. 1158 - 1165 (2014)
Comparative analyses of C-4 and C-3 photosynthesis in developing leaves of maize and rice. Nature biotechnology 39.
Journal Article
588 (20), pp. 3726 - 3731 (2014)
Heterologous expression of AtPAP2 in transgenic potato influences carbon metabolism and tuber development. FEBS Letters Meeting Abstract (1)
40.
Meeting Abstract
50, p. S13 - S13. Tissue Culture Association, Columbia, MD (2014)
The Role of Secondary Metabolites and COR Proteins in Plant Freezing Tolerance. In In Vitro Cellular & Developmental Biology-Animal, Talk (1)
41.
Talk
Interview with Alisdair R. Fernie. (2014)
Editorial (1)
42.
Editorial
7 (6), pp. 1065 - 1068 (2014)
Combined Transcriptomics and Metabolomics of Arabidopsis thaliana Seedlings Exposed to Exogenous GABA Suggest Its Role in Plants Is Predominantly Metabolic. Molecular Plant Review Article (9)
43.
Review Article
On the regulation and function of secondary metabolism during fruit development and ripening. (2014)
44.
Review Article
The complex role of mitochondrial metabolism in plant aluminum resistance. (2014)
45.
Review Article
On the role of plant mitochondrial metabolism and its impact on photosynthesis in both optimal and sub-optimal growth conditions. (2014)
46.
Review Article
2-Oxoglutarate: linking TCA cycle function with amino acid, glucosinolate, flavonoid, alkaloid, and gibberellin biosynthesis. (2014)
47.
Review Article
The role of photosynthesis and amino acid metabolism in the energy status during seed development. (2014)
48.
Review Article
Natural products from resurrection plants: Potential for medical applications. (2014)
49.
Review Article
Metabolic Control of Redox and Redox Control of Metabolism in Plants. (2014)
50.
Review Article
An update on source-to-sink carbon partitioning in tomato. (2014)