Publications of Alisdair Fernie

1101.

Review Article

Li, X.; Tieman, D.; Alseekh, S.; Fernie, A. R.; Klee, H. J.: Natural variations in the Sl-AKR9 aldo/keto reductase gene impact fruit flavor volatile and sugar contents. (2023)

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1102.

Review Article

Vallarino, J.G.; Hong, J.; Wang, S.; Wang, X.; Sade, N.; Orf, I.; Zhang, D.; Shi, J.; Shen, S.; Cuadros-Inostroza, Á. et al.; Xu, Q.; Luo, J.; Fernie, A. R.; Brotman, Y.: Limitations and advantages of using metabolite-based genome-wide association studies: Focus on fruit quality traits. (2023)

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1103.

Review Article

Dahmani, I.; Qin, K.; Zhang, Y.; Fernie, A. R.: The Formation and Function of Plant Metabolons. (2023)

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1104.

Review Article

Tiozon, R. J. N.; Fettke, J.; Sreenivasulu, N.; Fernie, A. R.: More than the main structural genes: Regulation of resistant starch formation in rice endosperm and its potential application. (2023)

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1105.

Review Article

Siqueira, J.A.; Batista-Silva, W.; Zsögön, A.; Fernie, A. R.; Araújo, W.L.; Nunes-Nesi, A.: Plant domestication: setting biological clocks. (2023)

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1106.

Review Article

Schlossarek, D.; Zhang, Y.; Sokolowska, E.; Fernie, A. R.; Luzarowski, M.; Skirycz, A.: Don’t let go – co-fractionation mass spectrometry for untargeted mapping of protein-metabolite interactomes. (2023)

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1107.

Review Article

Sreenivasulu, N.; Alseekh, S.; Tiozon, R. N.; Graner, A.; Martin, C.; Fernie, A. R.: Metabolic Signatures from Genebank Collections: An Underexploited Resource for Human Health? (2023)

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1108.

Review Article

Zhu, F.; Wen, W.; Cheng, Y.; Alseekh, S.; Fernie, A. R.: Integrating multiomics data accelerates elucidation of plant primary and secondary metabolic pathways. (2023)

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1109.

Review Article

Hayashi , K.; Alseekh, S.; Fernie, A. R.: Genetic and epigenetic control of the plant metabolome. (2023)

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1110.

Review Article

Rosado-Souza, L.; Yokoyama, R.; Sonnewald, U.; Fernie, A. R.: Understanding source–sink interactions: Progress in model plants and translational research to crops. (2023)

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1111.

Review Article

de Souza, L. P.; Fernie, A. R.: Computational methods for processing and interpreting mass spectrometry-based metabolomics. (2023)

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1112.

Review Article

Wang, S.; Qiang, Q.; Xiang, L.; Fernie, A. R.; Yang, J.: Targeted approaches to improve tomato fruit taste. (2023)

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1113.

Review Article

Schwenkert, S.; Fernie, A. R.; Geigenberger, P.; Leister, D.; Möhlmann, T.; Naranjo, B.; Neuhaus, H. E.: Chloroplasts are key players to cope with light and temperature stress. (2022)

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1114.

Review Article

Liu, Y.; Fernie, A. R.; Tohge, T.: Diversification of Chemical Structures of Methoxylated Flavonoids and Genes Encoding Flavonoid-O-Methyltransferases. (2022)

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1115.

Review Article

Gupta, K.J.; Kaladhar, V.C.; Fitzpatrick, T.B.; Fernie, A. R.; Møller, I.M.; Loake, G.J.: Nitric oxide regulation of plant metabolism. (2022)

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1116.

Review Article

Shen, S.; Zhan, C.; Yang, C.; Fernie, A. R.; Luo, J.: Metabolomics-centered mining of plant metabolic diversity and function: Past decade and future perspectives. (2022)

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1117.

Review Article

Tiozon, R.J.N.; Sartagoda, K. J. D.; Fernie, A. R.; Sreenivasulu, N.: The nutritional profile and human health benefit of pigmented rice and the impact of post-harvest processes and product development on the nutritional components: A review. (2021)

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1118.

Review Article

Zhang, Y.; Fernie, A. R.: Stable and temporary enzyme complexes and metabolons involved in energy and redox metabolism. (2021)

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1119.

Review Article

Medeiros, D.B.; Aarabi, F.; Rivas f; Fernie, A. R.: The knowns and unknowns of intracellular partitioning of carbon and nitrogen, with focus on the organic acid-mediated interplay between mitochondrion and chloroplast. (2021)

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1120.

Review Article

Wu, T.; Kerbler, S. M.; Fernie, A. R.; Zhang, Y.: Plant cell cultures as heterologous bio-factories for secondary metabolite production. (2021)

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1121.

Review Article

Maeda, H. A.; Fernie, A. R.: Evolutionary History of Plant Metabolism. (2021)

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1122.

Review Article

Alseekh, S.; Scossa, F.; Wen, W.; Luo, J.; Yan, J.; Beleggia, R.; Klee, H. J.; Huang, S.; Papa, R.; Fernie, A. R.: Domestication of Crop Metabolomes: Desired and Unintended Consequences. (2021)

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1123.

Review Article

Medeiros, D.B.; Brotman, Y.; Fernie, A. R.: The utility of metabolomics as a tool to inform maize biology. (2021)

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1124.

Review Article

Zhang, Y.; Fernie, A. R.: Metabolons, Enzyme-Enzyme Assemblies that Mediate Substrate Channeling, and Their Roles in Plant Metabolism. (2021)

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1125.

Review Article

Borghi, M.; Fernie, A. R.: Outstanding questions in flower metabolism. (2020)

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1126.

Review Article

Aarabi, F.; Naake, T.; Fernie, A. R.; Hoefgen, R.: Coordinating Sulfur Pools under Sulfate Deprivation. (2020)

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1127.

Review Article

de Souza, L. P.; Alseekh, S.; Brotman, Y.; Fernie, A. R.: Network based strategies in metabolomics data analysis and interpretation: from molecular networking to biological interpretation. (2020)

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1128.

Review Article

Fernández-Marín, B.; Gulías, J.; Figueroa, C. M.; Iñiguez, C.; Clemente-Moreno, M. J.; Nunes-Nesi, A.; Fernie, A. R.; Cavieres, L. A.; Bravo, L. A.; García-Plazaola, J. I. et al.; Gago, J.: How do vascular plants perform photosynthesis in extreme environments? An integrative ecophysiological and biochemical story. (2020)

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1129.

Review Article

Fernie, A. R.; Bachem, C.W.B.; Helariutta, Y.; Neuhaus, H.E.; Prat, S.; Ruan, Y.-L.; Stitt, M.; Sweetlove, L.J.; Tegeder, M.; Wahl, V. et al.; Sonnewald, S.; Sonnewald, U.: Synchronization of developmental, molecular and metabolic aspects of source–sink interactions. (2020)

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1130.

Review Article

Gupta, K. J.; Mur, L. A. J.; Wany, A.; Kumari, A.; Fernie, A. R.; Ratcliffe, R. G.: The role of nitrite and nitric oxide under low oxygen conditions in plants. (2020)

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1131.

Review Article

Liu, J.; Fernie, A. R.; Yan, J.: The past, present and future of maize improvement – domestication, genomics and functional genomic routes towards crop enhancement. (2020)

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1132.

Review Article

Luo, C.; Fernie, A. R.; Yan, J.: Single-Cell Genomics and Epigenomics: Technologies and Applications in Plants. (2020)

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1133.

Review Article

Nunes-Nesi, A.; Cavalcanti, J.H.F.; Fernie, A. R.: Characterization of In Vivo Function(s) of Members of the Plant Mitochondrial Carrier Family. (2020)

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1134.

Review Article

Rosado-Souza, L.; Fernie, A. R.; Aarabi, F.: Ascorbate and Thiamin: Metabolic Modulators in Plant Acclimation Responses. (2020)

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1135.

Review Article

Salem, M. A.; de Souza, L. P.; Serag, A.; Fernie, A. R.; Farag, M. A.; Ezzat, S. M.; Alseekh, S.: Metabolomics in the Context of Plant Natural Products Research: From Sample Preparation to Metabolite Analysis. (2020)

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1136.

Review Article

Tohge, T.; Fernie, A. R.: Co-Regulation of Clustered and Neo-Functionalized Genes in Plant-Specialized Metabolism. (2020)

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1137.

Review Article

Toleco, M.R.; Naake, T.; Zhang, Y.; Heazlewood, J. L.; Fernie, A. R.: Plant Mitochondrial Carriers: Molecular Gatekeepers That Help to Regulate Plant Central Carbon Metabolism. (2020)

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1138.

Review Article

Gago, J.; Carriquí, M.; Nadal, M.; Clemente-Moreno, M. J.; Coopman, R. E.; Fernie, A. R.; Flexas, J.: Photosynthesis Optimized across Land Plant Phylogeny. (2019)

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1139.

Review Article

Gupta, K. J.; Kumari, A.; Florez-Sarasa, I. D.; Fernie, A. R.; Igamberdiev, A. U.: Interaction of nitric oxide with the components of the plant mitochondrial electron transport chain. (2018)

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1140.

Review Article

Heyneke, E.; Fernie, A. R.: Metabolic regulation of photosynthesis. (2018)

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1141.

Review Article

Scossa, F.; Benina, M.; Alseekh, S.; Zhang, Y.; Fernie, A. R.: The Integration of Metabolomics and Next-Generation Sequencing Data to Elucidate the Pathways of Natural Product Metabolism in Medicinal Plants. (2018)

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1142.

Review Article

Borghi, M.; Fernie, A. R.; Schiestl, F. P.; Bouwmeester, H. J.: The Sexual Advantage of Looking, Smelling, and Tasting Good: The Metabolic Network that Produces Signals for Pollinators. (2017)

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1143.

Review Article

de Souza, L. P.; Naake, T.; Tohge, T.; Fernie, A. R.: From chromatogram to analyte to metabolite. How to pick horses for courses from the massive web resources for mass spectral plant metabolomics. (2017)

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1144.

Review Article

Geigenberger, P.; Thormählen, I.; Daloso, D. M.; Fernie, A. R.: The Unprecedented Versatility of the Plant‎ Thioredoxin System. (2017)

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1145.

Review Article

Goldy, C.; Svetaz, L. A.; Bustamante, C. A.; Allegrini, M.; Valentini, G. H.; Drincovich, M. F.; Fernie, A. R.; Lara, M. V.: Comparative proteomic and metabolomic studies between Prunus persica genotypes resistant and susceptible to Taphrina deformans suggest a molecular basis of resistance. (2017)

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1146.

Review Article

Timm, S.; Florian, A.; Fernie, A. R.; Bauwe, H.: The regulatory interplay between photorespiration and photosynthesis. (2016)

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1147.

Review Article

Daloso, D. M.; dos Anjos, L.; Fernie, A. R.: Roles of sucrose in guard cell regulation. (2016)

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1148.

Review Article

Liu, Z.; Schneider, R.; Kesten, C.; Zhang, Y.; Somssich, M.; Zhang, Y.; Fernie, A. R.; Persson, S.: Cellulose-Microtubule Uncoupling Proteins Prevent Lateral Displacement of Microtubules during Cellulose Synthesis in Arabidopsis. (2016)

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1149.

Review Article

Silva, W. B.; Daloso, D. M.; Fernie, A. R.; Nunes-Nesi, A.; Araujo, W. L.: Can stable isotope mass spectrometry replace radiolabelled approaches in metabolic studies? (2016)

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1150.

Review Article

Fettke, J.; Fernie, A. R.: Intracellular and cell-to-apoplast compartmentation of carbohydrate metabolism. (2015)

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Review Article (127)