Max-Planck-Institut für Molekulare Pflanzenphysiologie

Publikationen von Alisdair Fernie

Zeitschriftenartikel (958)

1.

Zeitschriftenartikel

Rivas, F.J.M.; Blanco-Portales, R.; Molina-Hidalgo, F.; Caballero, J.; de Souza, L. P.; Alseekh, S.; Fernie, A. R.; Munoz-Blanco, J.; Rodriguez-Franco, A.: Azacytidine arrests ripening in cultivated strawberry (Fragaria x ananassa) by repressing key genes and altering hormone contents. BMC Plant Biology 22 (1), 278 (2022)

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2.

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Tabatabaei, I.; Alseekh, S.; Shahid, M.; Leniak, E.; Wagner, M.; Mahmoudi, H.; Thushar, S.; Fernie, A. R.; Murphy, K. M.; Schmöckel, S. M. et al.; Tester, M.; Mueller-Roeber, B.; Skirycz, A.; Balazadeh, S.: The diversity of quinoa morphological traits and seed metabolic composition. Scientific Data 9 (1), 323 (2022)

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3.

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Salem, M.A.; El-Shiekh, R. A.; Fernie, A. R.; Alseekh, S.; Zayed, A.: Metabolomics-based profiling for quality assessment and revealing the impact of drying of Turmeric (Curcuma longa L.). Scientific Reports 12 (1), 10288 (2022)

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4.

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Del-Saz, N.; Iglesias-Sanchez, A.; Alonso-Forn, D.; Lopez-Gomez, M.; Palma, F.; Clemente-Moreno, M.; Fernie, A. R.; Ribas-Carbo, M.; Florez-Sarasa, I.: The Lack of Alternative Oxidase 1a Restricts in vivo Respiratory Activity and Stress-Related Metabolism for Leaf Osmoprotection and Redox Balancing Under Sudden Acute Water and Salt Stress in Arabidopsis thaliana. FRONTIERS IN PLANT SCIENCE 13, 833113 (2022)

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5.

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Yokoyama, R.; de Oliveira, M.V.V.; Takeda-Kimura, Y.; Ishihara, H.; Alseekh, S.; Arrivault, S.; Kukshal, V.; Jez, J.M.; Stitt, M.; Fernie, A. R. et al.; Maeda, H.A.: Point mutations that boost aromatic amino acid production and CO2 assimilation in plants. Science Advances 8 (23), eabo3416 (2022)

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6.

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Jiang, C.; Sun, J.; Li, R.; Yan, S.; Chen, W.; Guo, L.; Qin, G.; Wang, P.; Luo, C.; Huang, W. et al.; Zhang, Q.; Fernie, A. R.; Jackson, D.; Li, X.; Yan, J.: A reactive oxygen species burst causes haploid induction in maize. Molecular Plant 15 (6), S. 943 - 955 (2022)

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7.

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Alseekh, S.; Zhu, F.; Vallarino, J. G.; Sokolowska, E.; Yoshida, T.; Bergmann, S.; Wendenburg, R.; Bolze, A.; Skirycz, A.; Avin-Wittenberg, T. et al.; Fernie, A. R.: Autophagy modulates the metabolism and growth of tomato fruit during development. Horticulture Research, uhac129 (2022)

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8.

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Bohra, A.; Tiwari, A.; Kaur, P.; Ganie, S. A.; Raza, A.; Roorkiwal, M.; Mir, R. R.; Fernie, A. R.; Smýkal, P.; Varshney, R. K.: The Key to the Future Lies in the Past: Insights from Grain Legume Domestication and Improvement Should Inform Future Breeding Strategies. Plant and Cell Physiology, pcac086 (2022)

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9.

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Hong, J.; Rosental, L.; Xu, Y.; Xu, D.; Orf, I.; Wang, W.; Hu, Z.; Su, S.; Bai, S.; Ashraf, M. et al.; Hu, C.; Zhang, C.; Li, Z.; Xu, J.; Liu, Q.; Zhang, H.; Zhang, F.; Luo, Z.; Chen, M.; Chen, X.; Betts, N.; Fernie, A. R.; Liang, W.; Chen, G.; Brotman, Y.; Zhang, D.; Shi, J.: Genetic architecture of seed glycerolipids in Asian cultivated rice. Plant, Cell and Environment (2022)

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10.

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Li, P.; Ye, Z.; Fu, J.; Xu, Y.; Shen, Y.; Zhang, Y.; Tang, D.; Li, P.; Zuo, H.; Tong, W. et al.; Wang, S.; Fernie, A. R.; Zhao, J.: CsMYB184 regulates caffeine biosynthesis in tea plants. Plant Biotechnology Journal 20 (6), S. 1012 - 1014 (2022)

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11.

Zeitschriftenartikel

Skirycz, A.; Fernie, A. R.: Past accomplishments and future challenges of the multi-omics characterization of leaf growth. Plant Physiology 189 (2), S. 473 - 489 (2022)

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12.

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Wang, S.; Li, Y.; He, L.; Yang, J.; Fernie, A. R.; Luo, J.: Natural variance at the interface of plant primary and specialized metabolism. Current Opinion in Plant Biology 67, 102201 (2022)

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13.

Zeitschriftenartikel

Zhu, F.; Jadhav, S. S.; Tohge, T.; Salem, M. A.; Li, J. M.; Giovannoni, J. J.; Cheng, Y.; Alseekh, S.; Fernie, A. R.: A comparative transcriptomics and eQTL approach identifies SlWD40 as a tomato fruit ripening regulator. Plant Physiology (2022)

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14.

Zeitschriftenartikel

Stefan, T.; Wu, X.; Zhang, Y.; Fernie, A. R.; Schulze, W.: Regulatory Modules of Metabolites and Protein Phosphorylation in Arabidopsis Genotypes With Altered Sucrose Allocation. Frontiers in Plant Science 13, 891405 (2022)

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15.

Zeitschriftenartikel

Borghi, M.; de Souza, L. P.; Tohge, T.; Mi, J.; Melandri, G.; Proost, S.; Martins, M.; Al-Babili, S.; Bouwmeester, H.; Fernie, A. R.: High-energy-level metabolism and transport occur at the transition from closed to open flowers. Plant Physiology (2022)

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16.

Zeitschriftenartikel

Li, P.; Xia, E.; Fu, J.; Xu, Y.; Zhao, X.; Tong, W.; Tang, Q.; Tadege, M.; Fernie, A. R.; Zhao, J.: Diverse roles of MYB transcription factors in regulating secondary metabolite biosynthesis, shoot development, and stress responses in tea plants (Camellia sinensis). The Plant Journal 110 (4), S. 1144 - 1165 (2022)

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17.

Zeitschriftenartikel

Rodrigues-Salvador, A.; Lana-Costa, J.; Omena-Garcia, R.P.; Batista-Silva, W.; Scossa, F.; Rosado-Souza, L.; Pérez-Díaz, J.L.; Menezes-Silva, P.E.; DaMatta, F.M.; Sulpice, R. et al.; Araújo, W.L.; Zsögön, A.; Fernie, A. R.; Nunes-Nesi, A.: Metabolic shifts during fruit development in pungent and non-pungent peppers. Food Chemistry 375, 131850 (2022)

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18.

Zeitschriftenartikel

Amanda, D.; Frey, F. P.; Neumann, U.; Przybyl, M.; Šimura, J.; Zhang, Y.; Chen, Z.; Gallavotti, A.; Fernie, A. R.; Ljung, K. et al.; Acosta, I. F.: Auxin boosts energy generation pathways to fuel pollen maturation in barley. Current Biology 32 (8), S. 1798 - 1811 (2022)

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19.

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Siqueira, J.; Wakin, T.; Batista-Silva, W.; Silva, J.; Vicente, M.; Silva, J.; Clarindo, W.; Zsogon, A.; Peres, L.; De Veylder, L. et al.; Fernie, A. R.; Nunes-Nesi, A.; Araujo, W.: A long and stressful day: Photoperiod shapes aluminium tolerance in plants. Journal of Hazardous Materials 432, 128704 (2022)

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20.

Zeitschriftenartikel

Ishihara, H.; Alseekh, S.; Feil, R.; Perera, P.; George, G. M.; Niedzwiecki, P.; Arrivault, S.; Zeeman, S. C.; Fernie, A. R.; Lunn, J. E. et al.; Smith, A. M.; Stitt, M.: Rising rates of starch degradation during daytime and trehalose 6-phosphate optimize carbon availability. Plant Physiology, kiac162 (2022)

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21.

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Batista-Silva, W.; de Oliveira; Carvalho, A.; Oliveira Martins, A.; Siqueira, J. A.; Rodrigues-Salvador, A.; Omena-Garcia, R. P.; Medeiros, D.B.; Peres, L. E. P.; Ribeiro, D. M. et al.; Zsögön, A.; Fernie, A. R.; Nunes-Nesi, A.; Araújo, W. L.: Reduced auxin signalling through the cyclophilin DIAGEOTROPICA impacts tomato fruit development and metabolism during ripening. Journal of Experimental Botany, erac143 (2022)

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22.

Zeitschriftenartikel

Einhardt, A.M.; Oliveira, L.M.; Ferreira, S.; Araújo, W.L.; Medeiros, D.B.; Fernie, A. R.; Rodrigues, F.Á.: Defense responses and oxidative metabolism of glyphosate-resistant soybean plants infected by Phakopsora pachyrhizi modulated by glyphosate and nickel. Physiological and Molecular Plant Pathology 118, 101817 (2022)

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23.

Zeitschriftenartikel

Luo, Y.; Zhang, M.; Liu, Y.; Liu, J.; Li, W.; Chen, G.; Peng, Y.; Jin, M.; Wei, W.; Jian, L. et al.; Yan, J.; Fernie, A. R.; Yan, J.: Genetic variation in YIGE1 contributes to ear length and grain yield in maize. New Phytologist 234 (2), S. 513 - 526 (2022)

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24.

Zeitschriftenartikel

Naves, E. R.; Scossa, F.; Araújo, W. L.; Nunes-Nesi, A.; Fernie, A. R.; Zsögön, A.: Heterosis and reciprocal effects for agronomic and fruit traits in Capsicum pepper hybrids. Scientia Horticulturae 295, 110821 (2022)

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25.

Zeitschriftenartikel

Powell, A. F.; Feder, A.; Li, J.; Schmidt, M. H.-W.; Courtney, L.; Alseekh, S.; Jobson, E. M.; Vogel, A.; Xu, Y.; Lyon, D. et al.; Dumschott, K.; McHale, M.; Sulpice, R.; Bao, K.; Lal, R.; Duhan, A.; Hallab, A.; Denton, A. K.; Bolger, M. E.; Fernie, A. R.; Hind, S. R.; Mueller, L. A.; Martin, G. B.; Fei, Z.; Martin, C.; Giovannoni, J. J.; Strickler, S. R.; Usadel, B.: A Solanum lycopersicoides reference genome facilitates insights into tomato specialized metabolism and immunity. The Plant Journal (2022)

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26.

Zeitschriftenartikel

Rivas, F.J.M.; Blanco-Portales, R.; Moyano, E.; Alseekh, S.; Caballero, J. L.; Schwab, W.; Fernie, A. R.; Muñoz-Blanco, J.; Molina-Hidalgo, F. J.: Strawberry fruit FanCXE1 carboxylesterase is involved in the catabolism of volatile esters during the ripening process. Horticulture Research, uhac095 (2022)

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27.

Zeitschriftenartikel

Sageman-Furnas, K.; Nurmi, M.; Contag, M.; Plötner, B.; Alseekh, S.; Wiszniewski, A.A.G.; Fernie, A. R.; Smith, L. M.; Laitinen, R. A.: A. thaliana Hybrids Develop Growth Abnormalities Through Integration of Stress, Hormone and Growth Signalling. Plant and Cell Physiology (2022)

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28.

Zeitschriftenartikel

Sreenivasulu, N.; Fernie, A. R.: Diversity: current and prospective secondary metabolites for nutrition and medicine. Current Opinion in Biotechnology 74, S. 164 - 170 (2022)

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29.

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Zhu, F.; Wijesingha Ahchige, M.; Brotman, Y.; Alseekh, S.; Zsögön, A.; Fernie, A. R.: Bringing more players into play: Leveraging stress in genome wide association studies. Journal of Plant Physiology 271, 153657 (2022)

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30.

Zeitschriftenartikel

Chen, W.; Chen, L.; Zhang, X.; Guo, N. Y.; Wan, M.; Zhao, X.; Yin, P.; Cai, L.; Xu, J.; Zhang, L. et al.; Han, Y.; Xiao, Y.; Xu, G.; Wang, Y.; Wang, S.; Wu, S.; Yang, F.; Jackson, D.; Cheng, J.; Chen, S.; Sun, C.; Qin, F.; Tian, F.; Fernie, A. R.; Li, J.; Yan, J.; Yang, X.: Convergent selection of a WD40 protein that enhances grain yield in maize and rice. Science 375 (6587), eabg7985 (2022)

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31.

Zeitschriftenartikel

Chen, M.; Huang, W.; Yin, Z.; Zhang, W.; Kong, Q.; Wu, S.; Li, W.; Bai, Z.; Fernie, A. R.; Huang, X. et al.; Yan, S.: Environmentally-driven metabolite and lipid variations correspond to altered bioactivities of black wolfberry fruit. Food Chemistry 372, 131342 (2022)

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32.

Zeitschriftenartikel

Zhou, J.; Liu, C.; Chen, Q.; Liu, L.; Niu, S.; Chen, R.; Li, K.; Sun, Y.; Shi, Y.; Yang, C. et al.; Shen, S.; Li, Y.; Xing, J.; Yuan, H.; Liu, X.; Fang, C.; Fernie, A. R.; Luo, J.: Integration of rhythmic metabolome and transcriptome provides insights into the transmission of rhythmic fluctuations and temporal diversity of metabolism in rice. SCIENCE CHINA-LIFE SCIENCES (2022)

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33.

Zeitschriftenartikel

Borghi, M.; Arrivault, S.; Günther, M.; Medeiros, D.B.; Dell'Aversana, E.; Fusco, G.; Carillo, P.; Ludwig, M.; Fernie, A. R.; Lunn, J. E. et al.; Stitt, M.: Metabolic profiles in C-3, C-3-C-4 intermediate, C-4-like, and C-4 species in the genus Flaveria. Journal of Experimental Botany 73 (5), S. 1581 - 1601 (2022)

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34.

Zeitschriftenartikel

Rui, G.; Bourceret, A.; Guan, R.; Dorau, K.; Mansfeldt, T.; Omidbakhshfard, M. A.; Medeiros, D.B.; Fernie, A. R.; Hofmann, J.; Sonnewald, U. et al.; Mayer, J.; Gerlach, N.; Bucher, M.; Garrido-Oter, R.; Spaepen, S.; Schulze-Lefert, P.: Maize Field Study Reveals Covaried Microbiota and Metabolic Changes in Roots over Plant Growth. mBio 13 (2), e02584-21 (2022)

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35.

Zeitschriftenartikel

Skirycz, A.; Caldana, C.; Fernie, A. R.: Regulation of Plant Primary Metabolism - How Results From Novel Technologies Are Extending Our Understanding From Classical Targeted Approaches. Critical Reviews in Plant Sciences (2022)

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36.

Zeitschriftenartikel

Zhang, Z.; Shi, Q.; Wang, B.; Ma, A.; Wang, Y.; Xue, Q.; Shen, B.; Hamaila, H.; Tang, T.; Qi, X. et al.; Fernie, A. R.; Luo, J.; Li, X.: Jujube metabolome selection determined the edible properties acquired during domestication. The Plant Journal 109 (5), S. 1116 - 1133 (2022)

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37.

Zeitschriftenartikel

Fernie, A. R.; Alseekh, S.: Metabolomic selection–based machine learning improves fruit taste prediction. Proceedings of the National Academy of Sciences of the United States of America 199 (9), e2201078119 (2022)

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38.

Zeitschriftenartikel

Salem, M.A.; Aborehab, N.; Al-Karmalawy, A.; Fernie, A. R.; Alseekh, S.; Ezzat, S.: Potential Valorization of Edible Nuts By-Products: Exploring the Immune-Modulatory and Antioxidants Effects of Selected Nut Shells Extracts in Relation to Their Metabolic Profiles. Antioxidants: open access journal 11 (3), 462 (2022)

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39.

Zeitschriftenartikel

Salem, M.A.; Ezzat, S.M.; Ahmed, K.A.; Alseekh, S.; Fernie, A. R.; Essam, R.M.: A Comparative Study of the Antihypertensive and Cardioprotective Potentials of Hot and Cold Aqueous Extracts of Hibiscus sabdariffa L. in Relation to Their Metabolic Profiles. Frontiers in Pharmacology 13, 840478 (2022)

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40.

Zeitschriftenartikel

Liu, Y.; Fernie, A. R.; Tohge, T.: Diversification of Chemical Structures of Methoxylated Flavonoids and Genes Encoding Flavonoid-O-Methyltransferases. Plants 11 (4), 564 (2022)

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41.

Zeitschriftenartikel

Rocchetti, L.; Gioia, T.; Logozzo, G.; Brezeanu, C.; Pereira, L. G.; la Rosa; De, L.; Marzario, S.; Pieri, A.; Fernie, A. R. et al.; Alseekh, S.; Susek, K.; Cook, D. R.; Varshney, R. K.; Agrawal, S. K.; Hamwieh, A.; Bitocchi, E.; Papa, R.: Towards the Development, Maintenance and Standardized Phenotypic Characterization of Single-Seed-Descent Genetic Resources for Chickpea. Current Protocols 2 (2), e371 (2022)

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42.

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Gao, Y.; Thiele, W.; Saleh, O.; Scossa, F. (Central Metabolism, Department Willmitzer, Max Planck Institute of Molecular Plant Physiology, Max Planck Society), F.; Aarabi, F.; Zhang, H.; Sampathkumar, A.; Kühn, K.; Fernie, A. R.; Bock, R. et al.; Schöttler, M. A.; Zoschke, R.: Chloroplast translational regulation uncovers nonessential photosynthesis genes as key players in plant cold acclimation. Plant Cell 34 (5), S. 2056 - 2079 (2022)

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43.

Zeitschriftenartikel

Fernie, A. R.; Zhang, Y.: The Bacillus subtilis glutamate anti-metabolon. Nature Metabolism 4 (2), S. 161 - 162 (2022)

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44.

Zeitschriftenartikel

Gupta, K.J.; Kaladhar, V.C.; Fitzpatrick, T.B.; Fernie, A. R.; Møller, I.M.; Loake, G.J.: Nitric oxide regulation of plant metabolism. Molecular Plant 15 (2), S. 228 - 242 (2022)

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45.

Zeitschriftenartikel

Yang, C.; Shen, S.; Zhou, S.; Li, Y.; Mao, Y.; Zhou, J.; Shi, Y.; An, L.; Zhou, Q.; Peng, W. et al.; Lyu, Y.; Liu, X.; Chen, W.; Wang, S.; Qu, L.; Liu, X.; Fernie, A. R.; Luo, J.: Rice metabolic regulatory network spanning its entire life cycle. Molecular Plant 15 (2), S. 258 - 275 (2022)

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46.

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Fernie, A. R.: Asserting dominance: the subgenome networks underlying Canola seed development. The Plant Journal 109 (3), S. 475 - 476 (2022)

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47.

Zeitschriftenartikel

Lemaire-Chamley, M.; Koutouan, C.; Jorly, J.; Assali, J.; Yoshida, T.; Nogueira, M.; Tohge, T.; Ferrand, C.; Peres, L.; Asamizu, E. et al.; Ezura, H.; Fraser, P.; Hajirezaei, M.; Fernie, A. R.; Rothan, C.: A Chimeric TGA Repressor Slows Down Fruit Maturation and Ripening in Tomato. Plant and Cell Physiology 63 (1), S. 120 - 134 (2022)

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48.

Zeitschriftenartikel

Koschmieder, J.; Alseekh, S.; Shabani, M.; Baltenweck, R.; Maurino, V. G.; Palme, K.; Fernie, A. R.; Hugueney, P.; Welsch, R.: Color recycling: metabolization of apocarotenoid degradation products suggests carbon regeneration via primary metabolic pathways. Plant Cell Reports 41, S. 961 - 977 (2022)

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49.

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Mi, J.; Vallarino, J. G.; Petřík, I.; Novák, O.; Correa, S. M.; Kosmacz, M.; Havaux, M.; Rodriguez-Concepcion, M.; Al-Babili, S.; Fernie, A. R. et al.; Skirycz, A.; Moreno, J.C.: A manipulation of carotenoid metabolism influence biomass partitioning and fitness in tomato. Metabolic Engineering 70, S. 166 - 180 (2022)

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50.

Zeitschriftenartikel

Simeoni, F.; Skirycz, A.; Simoni, L.; Castorina, G.; de Souza, L. P.; Fernie, A. R.; Alseekh, S.; Giavalisco, P.; Conti, L.; Tonelli, C. et al.; Galbiati, M.: The AtMYB60 transcription factor regulates stomatal opening by modulating oxylipin synthesis in guard cells. Scientific Reports 12 (1), 533 (2022)

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