Publications of Alisdair Fernie | Max Planck Institute of Molecular Plant Physiology

Max Planck Institute of Molecular Plant Physiology

Journal Article (1030)

501.

Journal Article

Garbowicz, K.; Liu, Z.; Alseekh, S.; Tieman, D.; Taylor, M.; Kuhalskaya, A.; Ofner, I.; Zamir, D.; Klee, H. J.; Fernie, A. R. et al.; Brotman, Y.: Quantitative Trait Loci Analysis Identifies a Prominent Gene Involved in the Production of Fatty Acid-Derived Flavor Volatiles in Tomato. Molecular Plant 11 (9), pp. 1147 - 1165 (2018)

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502.

Journal Article

Hsueh, Y.-C.; Nicolaisen, K.; Gross, L.E.; Nöthen, J.; Schauer, N.; Vojta, L.; Ertel, F.; Koch, I.; Ladig, R.; Fulgosi, H. et al.; Fernie, A. R.; Schleiff, E.: The outer membrane Omp85-like protein P39 influences metabolic homeostasis in mature Arabidopsis thaliana. Plant Biology 20 (5), pp. 825 - 833 (2018)

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503.

Journal Article

Huang, L.; Pyc, M.; Alseekh, S.; McCarty, D. R.; de Crecy-Lagard, V.; Gregory III, J. F.; Henry, C. S.; Fernie, A. R.; Mullen, R. T.; Hanson, A. D.: A plastidial pantoate transporter with a potential role in pantothenate synthesis. Biochemical Journal 475, pp. 813 - 825 (2018)

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504.

Journal Article

Inostroza-Blancheteau, C.; de Oliveira Silva, F.M.; Durán, F.; Solano, J.; Obata, T.; Machado, M.; Fernie, A. R.; Reyes-Díaz, M.; Nunes-Nesi, A.: Metabolic diversity in tuber tissues of native Chiloé potatoes and commercial cultivars of Solanum tuberosum ssp. tuberosum L. Metabolomics 14 (10), 138 (2018)

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505.

Journal Article

Kamranfar, I.; Xue, G.-P.; Tohge, T.; Sedaghatmehr, M.; Fernie, A. R.; Balazadeh, S.; Mueller-Roeber, B.: Transcription factor RD26 is a key regulator of metabolic reprogramming during dark-induced senescence. New Phytologist 218 (4), pp. 1543 - 1557 (2018)

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506.

Journal Article

Kong, F.; Burlacot, A.; Liang, Y.; Legeret, B.; Alseekh, S.; Brotman, Y.; Fernie, A. R.; Krieger-Liszkay, A.; Beisson, F.; Peltier, G. et al.; Li-Beisson, Y.: Interorganelle Communication: Peroxisomal MALATE DEHYDROGENASE2 Connects Lipid Catabolism to Photosynthesis through Redox Coupling in Chlamydomonas. Plant Cell 30 (8), pp. 1824 - 1847 (2018)

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507.

Journal Article

Kou, S.; Chen, L.; Tu, W.; Scossa, F.; Wang, Y.; Liu, J.; Fernie, A. R.; Song, B.; Xie, C.: The arginine decarboxylase gene ADC1, associated to the putrescine pathway, plays an important role in potato cold-acclimated freezing tolerance as revealed by transcriptome and metabolome analyses. The Plant Journal 96 (6), pp. 1283 - 1298 (2018)

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508.

Journal Article

Lima, V. F.; de Souza, L. P.; Williams, T. C. R.; Fernie, A. R.; Daloso, D. M.: Gas Chromatography–Mass Spectrometry-Based 13C-Labeling Studies in Plant Metabolomics. Methods in Molecular Biology 1778, pp. 47 - 58 (2018)

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509.

Journal Article

Lima, V. F.; Medeiros, D.B.; Dos Anjos, L.; Gago, J.; Fernie, A. R.; Daloso, D. M.: Toward multifaceted roles of sucrose in the regulation of stomatal movement. Plant Signaling & Behavior 13 (8), e1494468 (2018)

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510.

Journal Article

Lorenz, C.; Brandt, S.; Borisjuk, L.; Rolletschek, H.; Heinzel, N.; Tohge, T.; Fernie, A. R.; Braun, H.-P.; Hildebrandt, T. M.: The Role of Persulfide Metabolism During Arabidopsis Seed Development Under Light and Dark Conditions. Frontiers in Plant Science 9, 1381 (2018)

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511.

Journal Article

Ma, X.; Zhang, Y.; Tureckova, V.; Xue, G.-P.; Fernie, A. R.; Mueller-Roeber, B.; Balazadeh, S.: The NAC Transcription Factor SlNAP2 Regulates Leaf Senescence and Fruit Yield in Tomato. Plant Physiology 177 (3), pp. 1286 - 1302 (2018)

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512.

Journal Article

Martins, A. O.; Nunes-Nesi, A.; Arauj, W. L.; Fernie, A. R.: To Bring Flowers or Do a Runner: Gibberellins Make the Decision. Molecular Plant 11 (1), pp. 4 - 6 (2018)

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513.

Journal Article

Medeiros, D.B.; de Souza, L. P.; Antunes, W. C.; Araujo, W. L.; Daloso, D. M.; Fernie, A. R.: Sucrose breakdown within guard cells provides substrates for glycolysis and glutamine biosynthesis during light-induced stomatal opening. The Plant Journal 94 (4), pp. 583 - 594 (2018)

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514.

Journal Article

Medeiros, D.B.; Fernie, A. R.; Araujo, W. L.: Discriminating the Function(s) of Guard Cell ALMT Channels. Trends in Plant Science 23 (8), pp. 649 - 651 (2018)

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515.

Journal Article

Monné, M.; Daddabbo, L.; Gagneul, D.; Obata, T.; Hielscher, B.; Palmieri, L.; Miniero, D. V.; Fernie, A. R.; Weber, A. P. M.; Palmieri, F.: Uncoupling proteins 1 and 2 (UCP1 and UCP2) from Arabidopsis thaliana are mitochondrial transporters of aspartate, glutamate, and dicarboxylates. The Journal of Biological Chemistry 293 (11), pp. 4213 - 4227 (2018)

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516.

Journal Article

Nietzsche, M.; Guerra, T.; Alseekh, S.; Wiermer, M.; Sonnewald, S.; Fernie, A. R.; Börnkea, F.: STOREKEEPER RELATED1/G-element binding protein (STKR1) interacts with protein kinase SnRK1. Plant Physiology 176 (2), pp. 1773 - 1792 (2018)

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517.

Journal Article

Rabêlo, F. H. S.; Fernie, A. R.; Navazas, A.; Borgo, L.; Keunen, E.; de da Silva, B. K. A.; Cuypers, A.; Lavres, J.: A glimpse into the effect of sulfur supply on metabolite profiling, glutathione and phytochelatins in Panicum maximum cv. Massai exposed to cadmium. Environmental and Experimental Botany 151, pp. 76 - 88 (2018)

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518.

Journal Article

Rosa-Tellez, S.; Djoro Anoman, A.; Flores-Tornero, M.; Toujani, W.; Alseekh, S.; Fernie, A. R.; Nebauer, S. G.; Munoz-Bertomeu, J.; Segura, J.; Ros, R.: Phosphoglycerate Kinases Are Co-Regulated to Adjust Metabolism and to Optimize Growth. Plant Physiology 176 (2), pp. 1182 - 1198 (2018)

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519.

Journal Article

Scossa, F.; Fernie, A. R.: How fruit ripening is ENCODEd. Nature Plants 4 (10), pp. 744 - 745 (2018)

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520.

Journal Article

Shimizu, T.; Watanabe, M.; Fernie, A. R.; Tohge, T.: Targeted LC-MS Analysis for Plant Secondary Metabolites. Methods in Molecular Biology 1778, pp. 171 - 182 (2018)

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521.

Journal Article

Shnaider, Y.; Mitra, D.; Miller, G.; Baniel, A.; Doniger, T.; Kuhalskaya, A.; Scossa, F.; Fernie, A. R.; Brotman, Y.; Perl-Treves, R.: Cucumber ovaries inhibited by dominant fruit express a dynamic developmental program, distinct from either senescence-determined or fruit-setting ovaries. The Plant Journal 96 (3), pp. 651 - 669 (2018)

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522.

Journal Article

Sonnewald, U.; Fernie, A. R.: Next-generation strategies for understanding and influencing source-sink relations in crop plants. Current Opinion in Plant Biology 43, pp. 63 - 70 (2018)

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523.

Journal Article

Sung, J.; Yun, H.; Back, S.; Fernie, A. R.; Kim, Y. X.; Lee, Y.; Lee, S.; Lee, D.; Kim, J.: Changes in mineral nutrient concentrations and C-N metabolism in cabbage shoots and roots following macronutrient deficiency. Journal of Plant Nutrition and Soil Science 181 (5), pp. 777 - 786 (2018)

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524.

Journal Article

Sweetlove, L. J.; Fernie, A. R.: The role of dynamic enzyme assemblies and substrate channelling in metabolic regulation. Nature Communications 9, 2136 (2018)

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525.

Journal Article

Timm, S.; Giese, J.; Engel, N.; Wittmiß, M.; Florian, A.; Fernie, A. R.; Bauwe, H.: T-protein is present in large excess over the other proteins of the glycine cleavage system in leaves of Arabidopsis. Planta 247 (1), pp. 41 - 51 (2018)

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526.

Journal Article

Tohge, T.; de Souza, L. P.; Fernie, A. R.: On the natural diversity of phenylacylated-flavonoid and their in planta function under conditions of stress. Phytochemistry Reviews 17 (2 ), pp. 279 - 290 (2018)

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527.

Journal Article

Tohge, T.; de Souza, L. P.; Fernie, A. R.: Current understanding of the pathways of flavonoid biosynthesis in model and crop plants. Journal of Experimental Botany 69 (18), p. 4497 - 4497 (2018)

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528.

Journal Article

Tohge, T.; de Souza, L. P.; Fernie, A. R.: Corrigendum: Current understanding of the pathways of flavonoid biosynthesis in model and crop plants. Journal of Experimental Botany 69 (18), 4497 (2018)

MPG.PuRe

529.

Journal Article

Vallarino, J. G.; de Abreu e Lima, F.; Soria, C.; Tong, H.; Pott, D. M.; Willmitzer, L.; Fernie, A. R.; Nikoloski, Z.; Osorio, S.: Genetic diversity of strawberry germplasm using metabolomic biomarkers. Scientific Reports 8 (1), 14386 (2018)

MPG.PuRe

530.

Journal Article

Watanabe, M.; Netzer, F.; Tohge, T.; Orf, I.; Brotman, Y.; Dubbert, D.; Fernie, A. R.; Rennenberg, H.; Hoefgen, R.; Herschbach, C.: Metabolome and Lipidome Profiles of Populus x canescens Twig Tissues During Annual Growth Show Phospholipid- Linked Storage and Mobilization of C, N, and S. Frontiers in Plant Science 9, 1292 (2018)

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531.

Journal Article

Watanabe, M.; Tohge, T.; Fernie, A. R.; Hoefgen, R.: The Effect of Single and Multiple SERAT Mutants on Serine and Sulfur Metabolism. Frontiers in Plant Science 9, 702 (2018)

MPG.PuRe

532.

Journal Article

Wen, W.; Jin, M.; Li, K.; Liu, H.; Xiao, Y.; Zhao, M.; Alseekh, S.; Li, W.; de Abreu e Lima, F.; Brotman, Y. et al.; Willmitzer, L.; Fernie, A. R.; Yan, J.: An integrated multi-layered analysis of the metabolic networks of different tissues uncovers key genetic components of primary metabolism in maize. The Plant Journal 93 (6), pp. 1116 - 1128 (2018)

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533.

Journal Article

Wu, S.; Tohge, T.; Cuadros-Inostroza, A. C.; Tong, H.; Tenenboim, H.; Kooke, R.; Méret, M.; Keurentjes, J. B.; Nikoloski, Z.; Fernie, A. R. et al.; Willmitzer, L.; Brotman, Y.: Mapping the Arabidopsis Metabolic Landscape by Untargeted Metabolomics at Different Environmental Conditions. Molecular Plant 11 (1), pp. 118 - 134 (2018)

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534.

Journal Article

Yoshida, T.; Fernie, A. R.: Remote Control of Transpiration via ABA. Trends in Plant Science 23 (9), pp. 755 - 758 (2018)

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535.

Journal Article

Zhang, Y.; Fernie, A. R.: On the role of the tricarboxylic acid cycle in plant productivity. Journal of Integrative Plant Biology 60 (12 - SI), pp. 1199 - 1216 (2018)

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536.

Journal Article

Zhang, Y.; Giuliani, R.; Zhang, Y.; Zhang, Y.; Araujo, W. L.; Wang, B.; Liu, P.; Sun, Q.; Cousins, A.; Edwards, G. et al.; Fernie, A. R.; Brutnell, T. P.; Li, P.: Characterization of maize leaf pyruvate orthophosphate dikinase using high throughput sequencing. Journal of Integrative Plant Biology 60 (8), pp. 670 - 690 (2018)

MPG.PuRe

537.

Journal Article

Zhang, Y.; Swart, C.; Alseekh, S.; Scossa, F.; Jiang, L.; Obata, T.; Graf, A.; Fernie, A. R.: The Extra-Pathway Interactome of the TCA Cycle: Expected and Unexpected Metabolic Interactions. Plant Physiology 177 (3), pp. 966 - 979 (2018)

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538.

Journal Article

Zhang, Y.; Zhang, Y.; McFarlane, H. E.; Obata, T.; Richter, A. S.; Lohse, M.; Grimm, B.; Persson, S.; Fernie, A. R.; Giavalisco, P.: Inhibition of TOR Represses Nutrient Consumption, Which Improves Greening after Extended Periods of Etiolation. Plant Physiology 178 (1), pp. 101 - 117 (2018)

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539.

Journal Article

Zhu, G.; Wang, S.; Huang, Z.; Zhang, S.; Liao, Q.; Zhang, C.; Lin, T.; Qin, M.; Peng, M.; Yang, C. et al.; Cao, X.; Han, X.; Wang, X.; van der Knaap, E.; Zhang, Z.; Cui, X.; Klee, H.; Fernie, A. R.; Luo, J.; Huang, S.: Rewiring of the Fruit Metabolome in Tomato Breeding. Cell 172 (1), pp. 249 - 261.e12 (2018)

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540.

Journal Article

Borghi, M.; Fernie, A. R.: Floral Metabolism of Sugars and Amino Acids: Implications for Pollinators’ Preferences and Seed and Fruit Set. Plant Physiology 175 (4), pp. 1510 - 1524 (2017)

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541.

Journal Article

Jorge, T. F.; Duro, N.; da Costa, M.; Florian, A.; Ramalho, J. C.; Ribeiro-Barros, A. I.; Fernie, A. R.; António, C.: GC-TOF-MS analysis reveals salt stress-responsive primary metabolites in Casuarina glauca tissues. Metabolomics 13 (8), 95 (2017)

MPG.PuRe

542.

Journal Article

Alseekh, S.; Tong, H.; Scossa, F.; Brotman, Y.; Vigroux, F.; Tohge, T.; Ofner, I.; Zamir, D.; Nikoloski, Z.; Fernie, A. R.: Canalization of Tomato Fruit Metabolism. Plant Cell 29 (11), pp. 2753 - 2765 (2017)

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543.

Journal Article

Arrivault, S.; Obata, T.; Szecówka, M.; Mengin, V.; Guenther, M.; Höhne, M.; Fernie, A. R.; Stitt, M.: Metabolite pools and carbon flow during C4 photosynthesis in maize: 13CO2 labeling kinetics and cell type fractionation. Journal of Experimental Botany 68, pp. 283 - 298 (2017)

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544.

Journal Article

Barros, J. A. S.; Cavalcanti, J. H. F.; Medeiros, D. B.; Nunes-Nesi, A.; Avin-Wittenberg, T.; Fernie, A. R.; Araujo, W. L.: Autophagy Deficiency Compromises Alternative Pathways of Respiration following Energy Deprivation in Arabidopsis thaliana. Plant Physiology 175 (1), pp. 62 - 76 (2017)

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545.

Journal Article

Barros, J. A. S.; Cavalcanti, J. H. F.; Medeiros, D. B.; Nunes-Nesi, A.; Avin-Wittenberg, T.; Fernie, A. R.; Araujo, W. L.: Commonalities and differences in plants deficient in autophagy and alternative pathways of respiration on response to extended darkness. Plant Signaling & Behavior 12 (11), e1377877 (2017)

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546.

Journal Article

Daloso, D. M.; Medeiros, D.B.; dos Anjos, L.; Yoshida, T.; Araujo, W. L.; Fernie, A. R.: Metabolism within the specialized guard cells of plants. New Phytologist 216 (4), pp. 1018 - 1033 (2017)

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547.

Journal Article

Eisenhut, M.; Bräutigam, A.; Timm, S.; Florian, A.; Tohge, T.; Fernie, A. R.; Bauwe, H.; Weber, A. P.M.: Photorespiration is crucial to the dynamic response of photosynthetic metabolism and stomatal movement to altered \CO2\ availability. Molecular Plant 10 (1), pp. 47 - 61 (2017)

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548.

Journal Article

Esteves-Ferreira, A. A.; Inaba, M.; Obata, T.; Fort, A.; Fleming, G. T. A.; Araujo, W. L.; Fernie, A. R.; Sulpice, R.: A Novel Mechanism, Linked to Cell Density, Largely Controls Cell Division in Synechocystis. Plant Physiology 174 (4), pp. 2166 - 2182 (2017)

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549.

Journal Article

Estrada-Johnson, E.; Csukasi, F.; Pizarro, C. M.; Vallarino, J. G.; Kiryakova, Y.; Vioque, A.; Brumos, J.; Medina-Escobar, N.; Botella, M. A.; Alonso, J. M. et al.; Fernie, A. R.; Sanchez-Sevilla, J. F.; Osorio, S.; Valpuesta, V.: Transcriptomic Analysis in Strawberry Fruits Reveals Active Auxin Biosynthesis and Signaling in the Ripe Receptacle. Frontiers in Plant Science 8, 889 (2017)

MPG.PuRe

550.

Journal Article

Estrada-Johnson, E.; Csukasi, F.; Pizarro, C. M.; Vallarino, J. G.; Kiryakova, Y.; Vioque, A.; Merchante, C.; Brumos, J.; Medina-Escobar, N.; Botella, M. A. et al.; Alonso, J. M.; Fernie, A. R.; Sánchez-Sevilla, J. F.; Osorio, S.; Valpuesta, V.: Corrigendum: Transcriptomic Analysis in Strawberry Fruits Reveals Active Auxin Biosynthesis and Signaling in the Ripe Receptacle. Frontiers in Plant Science 8, 1305 (2017)

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