Max Planck Institute of Molecular Plant Physiology

Publications of Alisdair Fernie

Journal Article (1207)

1.

Journal Article

Che, Y.; Shen, C.; Lu, X.; Ding, Z.; Zhou, Y.; Zhou, Q.; Liu, J.; Wang, Y.; Guo, J.; Yao, Y. et al.; Fernie, A. R.; Li, R.: How pyruvate postpones postharvest physiological deterioration of cassava. Postharvest Biology and Technology 242, 114543 (2026)

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2.

Journal Article

Ma, P.; Zhang, J.; Liu, W.; Xi, J.; Nie, Y.; Su, P.; Fernie, A. R.; Huang, L.; Qian, D.: Identification and characterization of three acyltransferases involved in the hydroxycinnamic acid amide synthesis of goji berry. Phytochemistry 250, 114957 (2026)

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3.

Journal Article

Shen, C.; Che, Y.; Ding, Z.; Zhou, Q.; Zhou, Y.; Fernie, A. R.; Liu, J.; Wang, Y.; Lu, X.; Guo, J. et al.; Yao, Y.; Li, R.: Mechanism of glyoxalase MeGLYI-13 in regulating postharvest physiological deterioration of cassava. Postharvest Biology and Technology 240, 114467 (2026)

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4.

Journal Article

Ibrahim, R. M.; Sedeek, M. S.; Li, Z.; Alseekh, S.; Fernie, A. R.; Farag, M. A.: Impacts of cultivar, tissue type, and processing methods on sweet potato metabolome and antioxidant activity: integrating UHPLC-MS/MS, molecular networking, UV–Vis spectroscopy, and in vitro assays. Food Chemistry 524, 150170 (2026)

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5.

Journal Article

Gouveia, D. G.; Barrios, W. E. B.; Martins, A. O.; Cavalcanti, J. H.; Rosado-Souza, L.; Siqueira, J. A.; de Menezes Daloso, D.; Fernie, A. R.; Nunes‐Nesi, A.; Weber, A. P. M. et al.; Araújo, W. L.: Lysine Biosynthesis Defines a Metabolic Checkpoint for Gibberellin‐Mediated Growth inArabidopsis thaliana. Plant, Cell and Environment 49 (8), pp. 5343 - 5357 (2026)

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6.

Journal Article

Silva, W. A.; Martins, A. O.; Wakin, T.; Silva, M. F.; Siqueira, J. A.; Rocha, J. P. L.; Medeiros, D.B.; Ribeiro, D. M.; Fernie, A. R.; Nunes-Nesi, A. et al.; Araújo, W. L.: Cell-specific–resolved coordination of mitochondrial metabolism and DNA damage responses underpins aluminium responses in plant roots. Journal of Hazardous Materials Advances 514, 142704 (2026)

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7.

Journal Article

Tiozon, R. J. N.; Fernie, A. R.; Sreenivasulu , N.: Reconfiguring biofortification strategies to transform food systems and address micronutrient deficiency of the 21st century. Journal of Integrative Plant Biology (2026)

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8.

Journal Article

Rosa‐Téllez, S.; García‐Calderón, M.; Medeiros, D.B.; Márquez, A. J.; Fernie, A. R.; Betti, M.: Disruption of asparagine synthetase is associated to increased biomass in Lotus japonicus. Plant Biotechnology Journal 24 (7), pp. 4471 - 4483 (2026)

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9.

Journal Article

Stitt, M.; Zierer, W.; Arrivault, S.; Sonnewald, U.; Fernie, A. R.: Compelling evidence supporting that cassava is a C3 plant. Molecular Plant 19 (7), pp. 1331 - 1333 (2026)

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10.

Journal Article

von Steimker, J.; Fernie, A. R.: Opinion piece: Moonlighting enzymes as hidden transcriptional regulators of metabolism. Journal of Plant Physiology 322, 154797 (2026)

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11.

Journal Article

von Steimker, J.; Macho m, M.; Wendenburg, R.; Lee jeon, J.; Zemach, I.; Xu, Y.; Fröhlich, A.; Sampathkumar, A.; Zamir, D.; Fei, Z. et al.; Giovannoni, J. J.; Fernie, A. R.; Alseekh, S.: Natural variation inSlGRF10reveals a role in regulating tomato fruit weight. Plant Physiology (2026)

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12.

Journal Article

Zhang, Y.; Fang, J.; Ruan, S.; Wang, Y.; Jiang, J.; Yang, Q.; Fernie, A. R.; Li, Y.: SmABCG11 mediates hydroxy fatty acid transport to regulate male fertility. Journal of Integrative Plant Biology (2026)

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13.

Journal Article

Zhang, Y.; Fang, J.; Ruan, S.; Wang, Y.; Jiang, J.; Yang, Q.; Fernie, A. R.; Li, Y.: SmABCG11 mediates hydroxy fatty acid transport to regulate male fertility. Journal of Integrative Plant Biology (2026)

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14.

Journal Article

Baccolini, C.; Ishihara, H.; Feil, R.; de Souza, L. P.; Alseekh, S.; Walther, D.; Fernie, A. R.; Stitt, M.; Lunn, J. E.; Arrivault, S.: Exploring the diversity of the CO2-concentrating mechanism (CCM) in different C4 subtypes. Journal of Experimental Botany 77 (12), pp. 3819 - 3836 (2026)

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15.

Journal Article

Decros, G.; Fernie, A. R.: A metabolon that GATEs. Nature Catalysis 9, pp. 573 - 574 (2026)

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16.

Journal Article

Fernie, A. R.; Decros, G.; Multhoff, J.; Sippel, J.; Niemeier, J.; Barreto, P.; Sampathkumar, A.; Sonnewald, U.; Schwarzländer, M.: PERSPECTIVE: organelle positioning as a principle of metabolic regulation and stress tolerance. The Plant Journal 126 (6), e70987 (2026)

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17.

Journal Article

Guo, J.; Duan, X.; Xu, H.; Xu, Z.; Fernie, A. R.; Zhang, Y.: Beyond a simple oxidation reaction: the complex molecular network regulating fruit and vegetable browning. Horticulture Research 13 (6) (2026)

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18.

Journal Article

Ibrahim, R. M.; Alseekh, S.; Haffelder, J.; Ramadan, N. S.; Abbas, G. M.; Fernie, A. R.; Ulber, R.; Zayed, A.: Untargeted metabolomics, lipidomics, and GC–MS profiling reveal species-specific and culture-induced metabolic signatures in brown macroalgae. Algal Research 96, 104748 (2026)

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19.

Journal Article

Jin, M.; Yan, S.; Wu, Y.; Zhai, Z.; Alseekh, S.; Chen, Y.; Huang, W.; Ma, N.; Tao, K.; Xiao, K. et al.; Zhu, Y.; Yu, Y.; Shao, Y.; Jiang, C.; Liu, X.; Sun, J.; Qu, Y.; Wei, W.; Li, W.; Xu, J.; Luo, J.; Wang, X.; Zhuo, L.; Zhan, J.; Qiu, F.; Yang, N.; Xiao, Y.; Liu, H.-J.; Fernie, A. R.; Yan, J.: Multiomics analysis of primary metabolism reveals the genetic basis of nitrogen partitioning modulated by ZmAVT1A-1 in maize. Nature Genetics (2026)

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20.

Journal Article

Kanwal, F.; Yang, J.; Fernie, A. R.; Wang, S.: Glucosylation-mediated kin avoidance inspires parasite-resistant crops. Trends in Plant Science 31 (6), pp. 745 - 748 (2026)

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21.

Journal Article

Nguyen, T. N. P.; Kim, M.; Sung, J.; Fernie, A. R.: Composition of Primary Metabolites in Winter Barley Grain as Affected by NPK Fertilization of Reclaimed Land. Plants 15, 1780 (2026)

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22.

Journal Article

Pérez-Mesa , P. A.; Pardo, R. A.; Alseekh, S.; Rojas-Contreras, S.; Sierra, G. P.; García, D. E.; Orejuela, A.; Lopez-Kleine, L.; Fernie, A. R.; Roda, F.: Genetic basis of alkaloid divergence in the Solanaceae. Plant Molecular Biology 116, 67 (2026)

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23.

Journal Article

Pérez-Mesa, P. A.; Pardo, R. A.; Alseekh, S.; Rojas-Contreras, S.; Sierra, G. P.; García, D. E.; Orejuela, A.; Lopez-Kleine, L.; Fernie, A. R.; Roda, F.: Genetic basis of alkaloid divergence in the Solanaceae. Plant Molecular Biology 116, 67 (2026)

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24.

Journal Article

Silva, R.; Siqueira, J.; Batista-Silva, W.; Silva, M.; Wakin, T.; Vargas, J.; Vilela, G.; Ribeiro, R.; Neto, D.; Azevedo, A. et al.; Ribeiro, C.; Fernie, A. R.; Nunes-Nesi, A.; Araújo, W.: The improved auxin signalling via entire mutation enhances aluminium tolerance in tomato. Plant Science 367, 113027 (2026)

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25.

Journal Article

Vallarino, J. G.; Rosado-Souza, L.; Zhang, Y.; Ratcliffe, R. G.; Sweetlove, L. J.; Shameer, S.; Fernie, A. R.: Mitochondrial glutamine synthetase overexpression in tomato source leaves increases assimilate export and fruit yield. The Plant Cell (2026)

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26.

Journal Article

Van Der Straeten, D.; Bulut, M.; Cao, D.; Aharoni, A.; Bouis, H.; Granell, A.; Gruissem, W.; Lindberg Møller, B.; Martin, C.; Puchta, H. et al.; Sreenivasulu, N.; Tissier, A.; Tripathi, L.; Van Montagu, M.; Fernie, A. R.: Genetic technologies to enhance crop nutritional value under climate change. Nature 654, pp. 877 - 891 (2026)

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27.

Journal Article

Wang, B.; Wang, Q. Y.; Shi, W. J.; Li, R. H.; Zhang, X. D.; Wang, L. P.; Xia, S. J.; Chen, K. X.; Zhou, J. J.; Sun, Y. Y. et al.; He, J.; Fernie, A. R.; Han, Y. C.; Li, J. Z.; Shi, Y. H.; Liu, X. Q.; Zhang, Y. Y.; Luo, J.; Jin, C.: Natural variation in the promoter ofOsPDX1.2enhances vitamin B6 accumulation and cold tolerance in rice. Journal of Integrative Plant Biology (2026)

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28.

Journal Article

Bret, R. S. C.; Cândido-Sobrinho, S. A.; Abreu, S. G.; Porto, N. P.; Medeiros, D.B.; de Souza, L. P.; Alves, M. S.; Fernie, A. R.; Daloso, D. M.: Time-resolved network metabolomics reveals metabolic reprogramming and network stability in cowpea leaves during virus infection. Theoretical and Experimental Plant Physiology 38, 8 (2026)

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29.

Journal Article

da Fonseca‐Pereira, P.; Mélo Neto, D. F.; Monteiro‐Batista, R. d. C.; Coelho, D. G.; Lana‐Costa, J.; de Souza, L. P.; Krahnert, I.; Daloso, D. M.; Gago, J.; Fernie, A. R. et al.; Araújo, W. L.; Nunes‐Nesi, A.: Thioredoxin system modulates metabolic and stomatal responses to elevatedCO2in Arabidopsis. New Phytologist (2026)

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30.

Journal Article

De Guzman, C.; Perfinian, G.; Alseekh, S.; Fernie, A. R.; Tiozon, R. J.; Sreenivasulu, N.: Integrative machine learning and structure-based computational modeling reveal germination-driven enrichment of bioactive dipeptides in pigmented rice. FOOD BIOSCIENCE 79, 108610 (2026)

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31.

Journal Article

Decros, G.; Fernie, A. R.: Utilizing biomolecular condensates as electrochemical reactors. Trends in Biotechnology 44 (5), pp. 1190 - 1192 (2026)

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32.

Journal Article

Górna, J.; Perlikowski, D.; Alseekh, S.; Rapacz, M.; Fernie, A. R.; Wójcik-Jagła, M.; Kosmala, A.: Remodeling of the leaf lipidome during cold acclimation, de-acclimation and re-acclimation influences the frost tolerance ofFestuca arundinacea. Plant and Cell Physiology (2026)

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33.

Journal Article

Kanwal, F.; Riaz, A.; Wang, S.; Zhou, K.; Fernie, A. R.; Yang, J.: Metabolic hijacking: how Xanthomonas feeds on plant sugars. Trends in Plant Science (2026)

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34.

Journal Article

von Steimker, J.; Bulut, M.; Pozhvanov , G.; Bergmann, S.; Wendenburg, R.; Sun, Y.; Zhu, F.; Pieri, A.; Frascarelli, G.; Nanni, L. et al.; Bellucci, E.; Bitocchi, E.; Papa, R.; Fernie, A. R.; Alseekh, S.: GWAS identifies regulators of seed and leaf morphology in common bean, revealing OFP5as a major seed size determinant. The Plant Journal 126 (3), e70909 (2026)

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35.

Journal Article

Cao, P.; Shen, S.; Yang, J.; Fernie, A. R.; Luo, J.; Wang, S.: Phenolamides: metabolic architects of plant adaptation. Trends in Plant Science 31 (4), pp. 394 - 406 (2026)

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36.

Journal Article

Deng, R.; Zhang, C.; Fernie, A. R.; Zhang, Y.: AI for plant protein–protein interactions prediction. The Plant Journal 126 (1), e70867 (2026)

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37.

Journal Article

Dong, J.; Zhang, L.; Ouyang, Q.; Zhang, F.; Zheng, W.; Fernie, A. R.; Song, Y.; Zhou, K.; Zhu, Z.; Yu, Y.: Abscisic acid alleviates cadmium toxicity in oilseed rape plants by regulating its accumulation, subcellular distribution, and ascorbate-glutathione cycle. Environmental and Experimental Botany 244, 106354 (2026)

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38.

Journal Article

Fernie, A. R.; Kai, G.; Luo, J.: Advances in plant natural products: Biosynthesis, bioengineering, and applications. Journal of Integrative Plant Biology 68 (4), pp. 845 - 848 (2026)

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39.

Journal Article

Iglesias-Sanchez, A.; García-Carbonell, S.; Fernie, A. R.; Pujol, M.; Florez-Sarasa, I.: Fruit respiration: putting alternative pathways into perspective. New Phytologist 250 (1), pp. 54 - 73 (2026)

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40.

Journal Article

Jia, X.; Zhang, X.; Chen, X.; Fernie, A. R.; Wen, W.: The horizontally transferred gene, CsMTAN, rewired purine traffic to build caffeine factories in tea leaves. Journal of Integrative Plant Biology 68 (4), pp. 1067 - 1081 (2026)

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41.

Journal Article

Kelly, G.; Meiri, D.; Hagbi, S. I.; Sharma, D.; Doron‐Faigenboim, A.; Egbaria, A.; Belausov, E.; Halaly‐Basha, T.; Mei, J.; Zhang, X. et al.; Yaaran, A.; Gal, A.; Zach, Y. Y.; Fernie, A. R.; Ye, W.; Brotman, Y.; Sade, N.: Natural variation links seedling hypocotyl growth with water loss in Arabidopsis. The Plant Journal 126 (1), e70862 (2026)

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42.

Journal Article

Liu, N.; Du, Y.; Yan, S.; Chen, W.; Deng, M.; Xu, S.; Wang, H.; Zhan, W.; Huang, W.; Yin, Y. et al.; Yang, X.; Zhao, Q.; Fernie, A. R.; Yan, J.: Publisher Correction to: The light and hypoxia induced gene ZmPORB1 determines tocopherol content in the maize kernel. Science China Life Sciences 69, p. 1820 (2026)

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43.

Journal Article

Sierra, G. P.; Orejuela, A.; Orozco, C. I.; Pérez‐Mesa, P. A.; Alseekh, S.; Fernandez‐Hilario, R.; Fernández‐Alonso, J. L.; Smith, S. D.; Fernie, A. R.; Roda, F.: A new arborescent genus of Datureae (Solanaceae) from Colombia and Peru, with implications for alkaloid evolution. TAXON 75 (2), e70130 (2026)

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44.

Journal Article

Zhang, W.; Wang, Y.; Li, W.; Wei, Y.; Wu, S.; Zhuo, D.; Ye, M.; Chen, Y.; Huang, W.; Li, Y. et al.; Xu, K.; Lai, J.; Fernie, A. R.; Yan, S.: Temporal dynamics of protein phosphorylation andS‐nitrosylation direct maize seed germination programs. The Plant Journal 126 (2026)

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45.

Journal Article

Harding, E. A.; Karbasi, A.; Fernie, A. R.; Bulut, M.: Domestication and genome evolution in allium crops: From hybrid origins to breeding perspectives. iScience 29 (3), 114922 (2026)

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46.

Journal Article

Ma, L.; Zuo, J.; Fernie, A. R.; Liu, S.; Zhou, X.; Jing, Z.; Wang, Y.; Feng, X.; Ren, Y.; Wu, C. et al.; Wang, R.; Shi, Y.; Zheng, Y.: A sweet corn metabolic regulatory network spanning the entire life cycle. Molecular Horticulture 6, 18 (2026)

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47.

Journal Article

Timm, S.; Florian, A.; Fernie, A. R.; Bauwe, H.: Arabidopsis photorespiration is not limited by mitochondrial serine hydroxymethyltransferase 1. Planta 263, 114 (2026)

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48.

Journal Article

Tiozon, R. J. N.; Zhan, J.; De Guzman, C. D.; Li, Z.; Zhang, X.; Yan, J.; Sreenivasulu, N.; Fernie, A. R.: Cereal protein biofortification at the interface of nutrition, yield and sustainability. Nature Plants 12, pp. 683 - 694 (2026)

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49.

Journal Article

Zhang, Y.; Shi, J.; Fernie, A. R.: Paclitaxel. Current Biology 36, pp. R238 - R240 (2026)

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50.

Journal Article

Fàbregas, N.; Yoshida, T.; Fernie, A. R.: Bidirectional crosstalk between plant hormone signaling and metabolism. Plant Physiology 200 (2), kiaf630 (2026)

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