Publications of A. R. Fernie

Su, C., Kokosza, A., Xie, X., Pěnčík, A., Zhang, Y. J., Raumonen, P., Shi, X., Muranen, S., Topcu, M. K., Immanen, J., Hagqvist, R., Safronov, O., Alonso-Serra, J., Eswaran, G., Venegas, M. P., Ljung, K., Ward, S., Mähönen, A. P., Himanen, K., Salojärvi, J., Fernie, A. R., Novák, O., Leyser, O., Pałubicki, W., Helariutta, Y. & Nieminen, K. Tree architecture: A strigolactone-deficient mutant reveals a connection between branching order and auxin gradient along the tree stem. Proceedings of the National Academy of Sciences of the United States of America 120, (2023).

von Bismarck, T., Wendering, P., de Souza, L. P., Ruß, J., Strandberg, L., Heyneke, E., Walker, B. J., Schöttler, M. A., Fernie, A. R., Nikoloski, Z. & Armbruster, U. Growth in fluctuating light buffers plants against photorespiratory perturbations. Nature Communications 14, (2023).

Zemach, I., Alseekh, S., Tadmor-Levi, R., Fisher, J., Torgeman, S., Trigerman, S., Nauen, J., Hayut, S. F., Mann, V., Rochsar, E., Finkers, R., Wendenburg, R., Osorio, S., Bergmann, S., Lunn, J. E., Semel, Y., Hirschberg, J., Fernie, A. R. & Zamir, D. Multi-year field trials provide a massive repository of trait data on a highly diverse population of tomato and uncover novel determinants of tomato productivity. The Plant Journal 116, 1136–1151 (2023).

Zhang, Y. J., Martinez-Jaime, S., Bulut, M., Graf, A. & Fernie, A. R. The conditional mitochondrial protein complexome in Arabidopsis thaliana root and shoot. Plant Communications 4, (2023).

Fernie, A. R. & Zhang, Y. J. Observations and implication of thermal tolerance in the Arabidopsis proteome. Cell Systems 14, 819–821 (2023).

Lamm, C. E., Rabbi, I. Y., Medeiros, D. B., Rosado-Souza, L., Pommerrenig, B., Dahmani, I., Rüscher, D., Hofmann, J., van Doorn, M., A., Schlereth, A., Neuhaus, H. E., Fernie, A. R., Sonnewald, U. & Zierer, W. Efficient sugar utilization and transition from oxidative to substrate-level phosphorylation in high starch storage roots of African cassava genotypes. The Plant Journal 116, 38–57 (2023).

Nicolas, P., Pattison, R. J., Zheng, Y., Lapidot-Cohen, T., Brotman, Y., Osorio, S., Fernie, A. R., Fei, Z. & Catalá, C. Starch deficiency in tomato causes transcriptional reprogramming that modulates fruit development, metabolism, and stress responses. Journal of Experimental Botany 74, 6331–6348 (2023).

Pereira-Lima, Í. A., Batista-Silva, W., Siqueira, J. A., Silva, M. F., Medeiros, D. B., Cavalcanti, J. H., Gonçalves, J. F. D. C., Ribeiro, D. M., Fernie, A. R., Nunes-Nesi, A. & Araújo, W. L. Differential Aluminum tolerance in Arabidopsis thaliana ecotypes is seemingly related to metabolite changes. Environmental and Experimental Botany 214, (2023).

Segarra-Medina, C., Alseekh, S., Fernie, A. R., Rambla, J. L., Pérez-Clemente, R. M., Gómez-Cádenas, A. & Zandalinas, S. I. Abscisic acid promotes plant acclimation to the combination of salinity and high light stress. Plant Physiology and Biochemistry 203, (2023).

Shan, N., Zhang, Y. J., Guo, Y., Zhang, W., Nie, J., Fernie, A. R. & Sui, X. Cucumber malate decarboxylase, CsNADP-ME2, functions in the balance of carbon and amino acid metabolism in fruit. Horticulture Research 10, (2023).

Siqueira, J. A., Zhang, Y. J., Nunes-Nesi, A., Fernie, A. R. & Araújo, W. L. Beyond photorespiration: the significance of glycine and serine in leaf metabolism. Trends in Plant Science 28, 1092–1094 (2023).

Steensma, P., Eisenhut, M., Colinas, M., Rosado-Souza, L., Fernie, A. R., Weber, A. P. M. & Fitzpatrick, T. B. PYRIDOX(AM)INE 5'-PHOSPHATE OXIDASE3 of Arabidopsis thaliana maintains carbon/nitrogen balance in distinct environmental conditions. Plant Physiology 193, 1433–1455 (2023).

Wan, H., Zhang, Y. J., Wu, L., Zhou, G., Pan, L., Fernie, A. R. & Ruan, Y.-L. Evolution of cytosolic and organellar invertases empowered the colonization and thriving of land plants. Plant Physiology 193, 1227–1243 (2023).

Younis, I. Y., Mohsen, E., Ibrahim, R. M., Fernie, A. R., Alseekh, S. & Salem, M. A. Non-targeted metabolomics and chemometrics for saffron (Crocus sativus L.) authentication and adulteration detection in relation to its anticholinesterase activity. Food Chemistry Advances 2, (2023).

Aarabi, F. & Fernie, A. R. Elucidating the role of ascorbate in light signaling. Trends in Plant Science 28, 978–980 (2023).

Aarabi, F. & Fernie, A. R. SPOTLIGHT: Ascorbate triggers the switch between cell division and cell differentiation in the Arabidopsis tapetum. Journal of Plant Physiology 288, (2023).

Li, R., Tang, F., Che, Y., Fernie, A. R., Zhou, Q., Ding, Z., Yao, Y., Liu, J., Wang, Y., Hu, X. & Guo, J. MeGLYI-13, a Glyoxalase I Gene in Cassava, Enhances the Tolerance of Yeast and Arabidopsis to Zinc and Copper Stresses. Plants 12, (2023).

Solis-Miranda, J., Chodasiewicz, M., Skirycz, A., Fernie, A. R., Moschou, P. N., Bozhkov, P. V. & Gutierrez-Beltran, E. Stress-related biomolecular condensates in plants. Plant Cell 35, 3187–3204 (2023).

Thirumalaikumar, V. P., Fernie, A. R. & Skirycz, A. Untargeted Proteomics and Metabolomics Analysis of Plant Organ Development. 2698, 75–85 (2023).

Zayed, A., Farag, M. A., Mehring, A., Salem, M. A., Ibrahim, R. M., Alseekh, S., Fernie, A. R. & Ulber, R. Methyl jasmonate elicitation effect on the metabolic profile of cambial meristematic cells culture derived from sweet basil (Ocimum basilicum L.) in relation to antioxidant activity: Untargeted metabolomics study in a time-based approach. Phytochemistry 213, (2023).