Publications of P. Giavalisco

Zhang, Y., Zhang, Y. J., McFarlane, H. E., Obata, T., Richter, A. S., Lohse, M., Grimm, B., Persson, S., Fernie, A. R. & Giavalisco, P. Inhibition of TOR Represses Nutrient Consumption, Which Improves Greening after Extended Periods of Etiolation. Plant Physiology 178, 101–117 (2018).

Barbash, S., Garfinkel, B. P., Maoz, R., Simchovitz, A., Nadorp, B., Guffanti, A., Bennett, E. R., Nadeau, C., Tuerk, A., Paul, L., Reda, T., Li, Y., Buchman, A. S., Greenberg, D. S., Seitz, A., Bennett, D. A., Giavalisco, P. & Soreq, H. Alzheimer's brains show inter-related changes in RNA and lipid metabolism. Neurobiology of Disease 106, 1–13 (2017).

Bozek, K., Khrameeva, E. E., Reznick, J., Omerbašić, D., Bennett, N. C., Lewin, G. R., Azpurua, J., Gorbunova, V., Seluanov, A., Regnard, P., Wanert, F., Marchal, J., Pifferi, F., Aujard, F., Liu, Z., Shi, P., Pääbo, S., Schröder, F., Willmitzer, L., Giavalisco, P. & Khaitovich, P. Lipidome determinants of maximal lifespan in mammals. Scientific Reports 7, (2017).

Hanhart, P., Thiess, M., Amari, K., Bajdzienko, K., Giavalisco, P., Heinlein, M. & Kehr, J. Bioinformatic and expression analysis of the Brassica napus L. cyclophilins. Scientific Reports 7, (2017).

Jueppner, J., Mubeen, U., Leisse, A., Caldana, C., Brus, H., Steup, M., Herrmann, M., Steinhauser, D. & Giavalisco, P. Dynamics of lipids and metabolites during the cell cycle of Chlamydomonas reinhardtii. The Plant Journal 92, 331–343 (2017).

Li, Q., Bozek, K., Xu, C., Guo, Y., Sun, J., Pääbo, S., Sherwood, C. C., Hof, P. R., Ely, J. J., Li, Y., Willmitzer, L., Giavalisco, P. & Khaitovich, P. Changes in lipidome composition during brain development in humans, chimpanzees, and macaque monkeys. Molecular Biology and Evolution 34, 1155–1166 (2017).

Salem, M. A., Li, Y., Wiszniewski, A. A. G. & Giavalisco, P. Regulatory-associated protein of TOR (RAPTOR) alters the hormonal and metabolic composition of Arabidopsis seeds, controlling seed morphology, viability and germination potential. The Plant Journal 92, 525–545 (2017).

Swiadek, M., Proost, S., Sieh, D., Yu, J., Todesco, M., Jorzig, C., Cubillos, A., Plötner, B., Nikoloski, Z., Chae, E., Giavalisco, P., Fischer, A., Schröder, F., Kim, S.-T., Weigel, D. & Laitinen, R. Novel allelic variants in ACD6 cause hybrid necrosis in local collection of Arabidopsis thaliana. New Phytologist 213, 900–915 (2017).

Liu, Z., Omranian, N., Neumetzler, L., Wang, T., Herter, T., Usadel, B., Demura, T., Giavalisco, P., Nikoloski, Z. & Persson, S. A transcriptional and metabolic framework for secondary wall formation in arabidopsis. Plant Physiology 172, 1334–1351 (2016).

Ostendorp, A., Pahlow, S., Krüßel, L., Hanhart, P., Garbe, M. Y., Deke, J., Giavalisco, P. & Kehr, J. Functional analysis of Brassica napus phloem protein and ribonucleoprotein complexes. New Phytologist 214, 1188–1197 (2016).

Salem, M. A., Jueppner, J., Bajdzienko, K. & Giavalisco, P. Protocol: A fast, comprehensive and reproducible one-step extraction method for the rapid preparation of polar and semi-polar metabolites, lipids, proteins, starch and cell wall polymers from a single sample. Plant Methods 12, (2016).

Sharma, D. K., Gautam, K., Jueppner, J., Giavalisco, P., Rihko-Struckmann, L., Pareek, A. & Sundmacher, K. UPLC-MS analysis of Chlamydomonas reinhardtii and Scenedesmus obliquus lipid extracts and their possible metabolic roles. Journal of applied phycology 27, 1149–1159 (2015).

Kleessen, S., Irgang, S., Klie, S., Giavalisco, P. & Nikoloski, Z. Integration of transcriptomics and metabolomics data specifies the metabolic response of Chlamydomonas to rapamycin treatment. The Plant Journal 81, 822–835 (2015).

Alseekh, S., Tohge, T., Wendenburg, R., Scossa, F., Omranian, N., Li, J., Kleessen, S., Giavalisco, P., Pleban, T., Mueller-Roeber, B., Zamir, D., Nikoloski, Z. & Fernie, A. R. Identification and mode of inheritance of quantitative trait Loci for secondary metabolite abundance in tomato. The Plant Cell 27, 485–512 (2015).

Avin-Wittenberg, T., Bajdzienko, K., Wittenberg, G., Alseekh, S., Tohge, T., Bock, R., Giavalisco, P. & Fernie, A. R. Global Analysis of the Role of Autophagy in Cellular Metabolism and Energy Homeostasis in Arabidopsis Seedlings under Carbon Starvation. The Plant Cell 27, 306–322 (2015).

Bozek, K., Wei, Y., Yan, Z., Liu, X., Xiong, J., Sugimoto, M., Tomita, M., Paeaebo, S., Sherwood, C. C., Hof, P. R., Ely, J. J., Li, Y., Steinhauser, D., Willmitzer, L., Giavalisco, P. & Khaitovich, P. Organization and Evolution of Brain Lipidome Revealed by Large-Scale Analysis of Human, Chimpanzee, Macaque, and Mouse Tissues. Neuron 85, 695–702 (2015).

Bromke, M. A., Hochmuth, A., Tohge, T., Fernie, A. R., Giavalisco, P., Burgos, A., Willmitzer, L. & Brotman, Y. Liquid chromatography high-resolution mass spectrometry for fatty acid profiling. The Plant Journal 81, 529–536 (2015).

Li, N., Gügel, I. L., Giavalisco, P., Zeisler, V., Schreiber, L., Soll, J. & Philippar, K. FAX1, a Novel Membrane Protein Mediating Plastid Fatty Acid Export. PLoS Biology 13, (2015).

Vallarino, J. G., Osorio, S., Bombarely, A., Casanal, A., Cruz-Rus, E., Sanchez-Sevilla, J. F., Amaya, I., Giavalisco, P., Fernie, A. R., Botella, M. A. & Valpuesta, V. Central role of FaGAMYB in the transition of the strawberry receptacle from development to ripening. The New Phytologist 208, 482–496 (2015).

Hauck, O. K., Scharnberg, J., Escobar, N. M., Wanner, G., Giavalisco, P. & Witte, C.-P. Uric Acid Accumulation in an Arabidopsis Urate Oxidase Mutant Impairs Seedling Establishment by Blocking Peroxisome Maintenance. Plant Cell 26, 3090–3100 (2014).