Publications of J. Selbig

Larhlimi, A., David, L., Selbig, J. & Bockmayr, A. F2C2: a fast tool for the computation of flux coupling in genome-scale metabolic networks. Bmc Bioinformatics 13, 57 (2012).

Meyer, R. C., Witucka-Wall, H., Becher, M., Blacha, A., Boudichevskaia, A., Doermann, P., Fiehn, O., Friedel, S., von Korff, M., Lisec, J., Melzer, M., Repsilber, D., Schmidt, R., Scholz, M., Selbig, J., Willmitzer, L. & Altmann, T. Heterosis manifestation during early Arabidopsis seedling development is characterized by intermediate gene expression and enhanced metabolic activity in the hybrids. The Plant Journal 71, 669–683 (2012).

Schichor, C., Albrecht, V., Korte, B., Buchner, A., Riesenberg, R., Mysliwietz, J., Paron, I., Motaln, H., Turnsek, T. L., Jurchott, K., Selbig, J. & Tonn, J. C. Mesenchymal stem cells and glioma cells form a structural as well as a functional syncytium in vitro. Experimental Neurology 234, 208–219 (2012).

Basler, G., Ebenhoeh, O., Selbig, J. & Nikoloski, Z. Mass-balanced randomization of metabolic networks. Bioinformatics 27, 1397–1403 (2011).

Basler, G., Grimbs, S., Ebenhoeh, O., Selbig, J. & Nikoloski, Z. Evolutionary significance of metabolic network properties. Journal of the Royal Society Interface 9, 1168–1176 (2011).

Catchpole, G., Platzer, A., Weikert, C., Kempkensteffen, C., Johannsen, M., Krause, H., Jung, K., Miller, K., Willmitzer, L., Selbig, J. & Weikert, S. Metabolic profiling reveals key metabolic features of renal cell carcinoma. Journal of Cellular and Molecular Medicine 15, 109–118 (2011).

Grimbs, S., Arnold, A., Koseka, A., Kurths, J., Selbig, J. & Nikoloski, Z. Spatiotemporal dynamics of the Calvin cycle: Multistationarity and symmetry breaking instabilities. Biosystems 103, 212–223 (2011).

Hoehenwarter, W., Larhlimi, A., Hummel, J., Egelhofer, V., Selbig, J., van Dongen, J. T., Wienkoop, S. & Weckwerth, W. MAPA Distinguishes Genotype-Specific Variability of Highly Similar Regulatory Protein Isoforms in Potato Tuber. Journal of Proteome Research 10, 2979–2991 (2011).

Jurchott, K., Guo, K. T., Catchpole, G., Feher, K., Willmitzer, L., Schichor, C. & Selbig, J. Comparison of metabolite profiles in U87 glioma cells and mesenchymal stem cells. Biosystems 105, 130–139 (2011).

Lisec, J., Romisch-Margl, L., Nikoloski, Z., Piepho, H. P., Giavalisco, P., Selbig, J., Gierl, A. & Willmitzer, L. Corn hybrids display lower metabolite variability and complex metabolite inheritance patterns. The Plant Journal 68, 326–336 (2011).

Nikoloski, Z., Grimbs, S., Klie, S. & Selbig, J. Complexity of automated gene annotation. Biosystems 104, 1–8 (2011).

Ryngajllo, M., Childs, L., Lohse, M., Giorgi, F. M., Lude, A., Selbig, J. & Usadel, B. SLocX: predicting subcellular localization of Arabidopsis proteins leveraging gene expression data. Frontiers in Plant Science 2, 43 (2011).

Andorf, S., Selbig, J., Altmann, T., Poos, K., Witucka-Wall, H. & Repsilber, D. Enriched partial correlations in genome-wide gene expression profiles of hybrids (A. thaliana): a systems biological approach towards the molecular basis of heterosis. Theoretical and Applied Genetics 120, 249–259 (2010).

Bischoff, V., Selbig, J. & Scheible, W.-R. Involvement of TBL/DUF231 proteins into cell wall biology. Plant Signaling & Behavior 5, 1057–1059 (2010).

Hische, M., Luis-Dominguez, O., Pfeiffer, A. F. H., Schwarz, P. E., Selbig, J. & Spranger, J. Decision trees as a simple-to-use and reliable tool to identify individuals with impaired glucose metabolism or type 2 diabetes mellitus. European Journal of Endocrinology 163, 565–571 (2010).

Hummel, J., Strehmel, N., Selbig, J., Walther, D. & Kopka, J. Decision tree supported substructure prediction of metabolites from GC-MS profiles. Metabolomics 6, 322–333 (2010).

Jozefczuk, S., Klie, S., Catchpole, G., Szymanski, J., Cuadros-Inostroza, A., Steinhauser, D., Selbig, J. & Willmitzer, L. Metabolomic and transcriptomic stress response of Escherichia coli. Molecular Systems Biology 6, 364 (2010).

Klie, S., Nikoloski, Z. & Selbig, J. Biological Cluster Evaluation for Gene Function Prediction. Journal of Computational Biology 17, 1–18 (2010).

Korn, M., Gärtner, T., Erban, A., Kopka, J., Selbig, J. & Hincha, D. K. Predicting Arabidopsis Freezing Tolerance and Heterosis in Freezing Tolerance from Metabolite Composition. Molecular Plant 3, 224–235 (2010).

Lohse, M., Nunes-Nesi, A., Krueger, P., Nagel, A., Hannemann, J., Giorgi, F. M., Childs, L., Osorio, S., Walther, D., Selbig, J., Sreenivasulu, N., Stitt, M., Fernie, A. R. & Usadel, B. Robin: An Intuitive Wizard Application for R-Based Expression Microarray Quality Assessment and Analysis. Plant Physiology 153, 642–651 (2010).