Publications of A. R. Fernie

Borghi, M., Pacifico, D., Crucitti, D., Squartini, A., Berger, M. M. J., Gamboni, M., Carimi, F., Lehad, A., Costa, A., Gallusci, P., Fernie, A. R. & Zottini, M. Smart selection of soil microbes for resilient and sustainable viticulture. The Plant Journal (2024). doi:Smart selection of soil microbes for resilient and sustainable viticulture

Boutoub, O., Jadhav, S., Zheng, X., El Ghadraoui, L., Al Babili, S., Fernie, A. R., Figueiredo, A. C., Miguel, M. G. & Borghi, M. Biochemical characterization of Euphorbia resinifera floral cyathia. Journal of Plant Physiology 293, (2024).

Chen, J., Zhang, Y. Q., Wei, J. Q., Hu, X., Yin, H. R., Liu, W., Li, D. Q., Tian, W. F., Hao, Y. F., He, Z. H., Fernie, A. R. & Chen, W. Beyond pathways: Accelerated flavonoids candidate identification and novel exploration of enzymatic properties using combined mapping populations of wheat. Plant Biotechnology Journal (2024). doi:10.1111/pbi.14323

Dziubek, D., Poeker, L., Siemiatkowska, B., Graf, A., Marino, G., Alseekh, S., Arrivault, S., Fernie, A. R., Armbruster, U. & Geigenberger, P. NTRC and thioredoxins m1/m2 underpin the light acclimation of plants on proteome and metabolome levels. Plant Physiology 194, 982–1005 (2024).

Elbanna, A. H., Abdelghany, S., Alseekh, S., Fernie, A. R. & Farag, M. A. Seasonal and taxa impact on edible sea cucumber metabolome as analyzed via a multiplex approach of mass spectroscopy-based metabolomics. Food Bioscience 57, (2024).

Fuchs, P., Feixes-Prats, E., Arruda, P., Feitosa-Araújo, E., Fernie, A. R., Grefen, C., Lichtenauer, S., Linka, N., de Godoy Maia, I., Meyer, A. J., Schilasky, S., Sweetlove, L. J., Wege, S., Weber, A. P. M., Millar, A. H., Keech, O., Florez-Sarasa, I., Barreto, P. & Schwarzländer, M. PLANT UNCOUPLING MITOCHONDRIAL PROTEIN 2 localizes to the Golgi. Plant Physiology 194, 623–628 (2024).

Pereira, A. M., Martins, A. O., Batista-Silva, W., Condori-Apfata, J. A., Silva, V. F., Oliveira, L. A., Andrade, E. S., Martins, S. C. V., Medeiros, D. B., Nascimento, V. L., Fernie, A. R., Nunes-Nesi, A. & Araújo, W. L. Differential content of leaf and fruit pigment in tomatoes culminate in a complex metabolic reprogramming without growth impacts. Journal of Plant Physiology 293, (2024).

Rosa-Téllez, S., Alcántara-Enguídanos, A., Martinez-Seidel, F., Casatejada-Anchel, R., Saeheng, S., Bailes, C. L., Erban, A., Medeiros, D. B., Alepúz, P., Matus, J. T., Kopka, J., Muñoz-Bertomeu, J., Krueger, S., Roje, S., Fernie, A. R. & Ros, R. The serine-glycine-one carbon metabolic network orchestrates changes in nitrogen and sulfur metabolism and shapes plant development. The Plant Cell 36, 404–426 (2024).

Sun, Y., Zhou, Y., Long, Q., Xing, J., Guo, P., Liu, Y., Zhang, C., Zhang, Y., Fernie, A. R., Shi, Y., Luo, Y., Luo, J. & Jin, C. OsBCAT2, a gene responsible for the degradation of branched-chain amino acids, positively regulates salt tolerance by promoting the synthesis of vitamin B5. New Phytologist 241, 2558–2574 (2024).

Carreno-Quintero, N., Tohge, T., Van Acker, R., McKee, L. S., Zhou, Q., Bolze, A., Xing, X., Özparpucu, M., Rüggeberg, M., Piofczyk, T., Koram, Y., Bulone, V., Boerjan, W., Fernie, A. R. & Fraser, P. D. Non-targeted discovery of high-value bio-products in Nicotiana glauca L: a potential renewable plant feedstock. Bioresources and Bioprocessing 11, (2024).

Liu, N., Du, Y., Yan, S., Chen, W., Deng, M., Xu, S., Wang, H., Zhan, W., Huang, W., Yin, Y., Yang, X., Zhao, Q., Fernie, A. R. & Yan, J. The light and hypoxia induced gene ZmPORB1 determines tocopherol content in the maize kernel. Science China Life Sciences 67, 435–448 (2024).

Yin, B., Jia, J., Sun, X., Hu, X., Ao, M., Liu, W., Tian, Z., Liu, H., Li, D., Tian, W., Hao, Y., Xia, X., Sade, N., Brotman, Y., Fernie, A. R., Chen, J., He, Z. & Chen, W. Dynamic metabolite QTL analyses provide novel biochemical insights into kernel development and nutritional quality improvement in common wheat. Plant Communications (2024). doi:10.1016/j.xplc.2024.100792

Daubermann, A. G., Lima, V. F., Erban, A., Kopka, J., Fernie, A. R., Schwarzländer, M., dos Anjos, L. & Daloso, D. M. Novel guard cell sink characteristics revealed by a multi-species/cell-types meta-analysis of 13C-labelling experiments. Theoretical and Experimental Plant Physiology (2024). doi:10.1007/s40626-023-00299-9

John, A., Krämer, M., Lehmann, M., Kunz, H.-H., Aarabi, F., Alseekh, S., Fernie, A. R., Sommer, F., Schroda, M., Zimmer, D., Mühlhaus, T., Peisker, H., Gutbrod, K., Dörmann, P., Neunzig, J., Philippar, K. & Neuhaus, H. E. Degradation of FATTY ACID EXPORT PROTEIN1 by RHOMBOID-LIKE PROTEASE11 contributes to cold tolerance in Arabidopsis. The Plant Cell (2024). doi:10.1093/plcell/koae011

Li, J., Martin, C. & Fernie, A. R. Biofortification’s contribution to mitigating micronutrient deficiencies. Nature Food 5, 19–27 (2024).

Lv, Y., Zhu, J., Huang, S., Xing, X., Zhou, S., Yao, H., Yang, Z., Liu, L., Huang, S., Miao, Y., Liu, X., Fernie, A. R., Ding, Y. & Luo, J. Metabolome profiling and transcriptome analysis filling the early crucial missing steps of piperine biosynthesis in Piper nigrum L. The Plant Journal 117, 107–120 (2024).

Karakas, E., Ferrante, P., Schafleitner, R., Giuliano, G., Fernie, A. R. & Alseekh, S. Plant Sample Collection and Shipment for Multi-omic Analyses and Phytosanitary Evaluation. Current Protocols 3, (2023).

Zhang, Y. J., Wiese, L., Fang, H., Alseekh, S., de Souza, L. P., Scossa, F., Molloy, J., Christmann, M. & Fernie, A. R. Synthetic biology identifies the minimal gene set required for Paclitaxel biosynthesis in a plant chassis. Molecular Plant 16, 1951–1961 (2023).

Artins, A. & Fernie, A. R. FCS-like zinc finger proteins maintain energy homeostasis during stresses. Trends in Plant Science 28, 1347–1349 (2023).

Barros, J. A. S., Cavalcanti, J. H. F., Pimentel, K. G., Magen, S., Soroka, Y., Weiss, S., Medeiros, D. B., Nunes-Nesi, A., Fernie, A. R., Avin-Wittenberg, T. & Araújo, W. L. The interplay between autophagy and chloroplast vesiculation pathways under dark-induced senescence. Plant, Cell and Environment 46, 3721–3736 (2023).