Publications of A. R. Fernie

Medeiros, D. B., Aarabi, F., Rivas f & Fernie, A. R. The knowns and unknowns of intracellular partitioning of carbon and nitrogen, with focus on the organic acid-mediated interplay between mitochondrion and chloroplast. Journal of Plant Physiology 266, (2021).

Wu, T., Kerbler, S. M., Fernie, A. R. & Zhang, Y. J. Plant cell cultures as heterologous bio-factories for secondary metabolite production. Plant Communications 2, (2021).

Maeda, H. A. & Fernie, A. R. Evolutionary History of Plant Metabolism. Annu. Rev. Plant Biol. 72, 185–216 (2021).

Alseekh, S., Scossa, F., Wen, W., Luo, J., Yan, J., Beleggia, R., Klee, H. J., Huang, S., Papa, R. & Fernie, A. R. Domestication of Crop Metabolomes: Desired and Unintended Consequences. Trends in Plant Science 26, 650–661 (2021).

Medeiros, D. B., Brotman, Y. & Fernie, A. R. The utility of metabolomics as a tool to inform maize biology. Plant Communications 2, (2021).

Zhang, Y. J. & Fernie, A. R. Metabolons, Enzyme-Enzyme Assemblies that Mediate Substrate Channeling, and Their Roles in Plant Metabolism. Plant Communications 2, (2021).

Borghi, M. & Fernie, A. R. Outstanding questions in flower metabolism. The Plant Journal 103, 1275–1288 (2020).

Aarabi, F., Naake, T., Fernie, A. R. & Hoefgen, R. Coordinating Sulfur Pools under Sulfate Deprivation. Trends in Plant Science 25, 1227–1239 (2020).

de Souza, L. P., Alseekh, S., Brotman, Y. & Fernie, A. R. Network based strategies in metabolomics data analysis and interpretation: from molecular networking to biological interpretation. Expert Review of Proteomics 17, 243–255 (2020).

Fernández-Marín, B., Gulías, J., Figueroa, C. M., Iñiguez, C., Clemente-Moreno, M. J., Nunes-Nesi, A., Fernie, A. R., Cavieres, L. A., Bravo, L. A., García-Plazaola, J. I. & Gago, J. How do vascular plants perform photosynthesis in extreme environments? An integrative ecophysiological and biochemical story. The Plant Journal 101, 979–1000 (2020).

Fernie, A. R., Bachem, C. W. B., Helariutta, Y., Neuhaus, H. E., Prat, S., Ruan, Y.-L., Stitt, M., Sweetlove, L. J., Tegeder, M., Wahl, V., Sonnewald, S. & Sonnewald, U. Synchronization of developmental, molecular and metabolic aspects of source–sink interactions. Nature Plants 6, 55–66 (2020).

Gupta, K. J., Mur, L. A. J., Wany, A., Kumari, A., Fernie, A. R. & Ratcliffe, R. G. The role of nitrite and nitric oxide under low oxygen conditions in plants. New Phytologist 225, 1143–1151 (2020).

Liu, J., Fernie, A. R. & Yan, J. The past, present and future of maize improvement – domestication, genomics and functional genomic routes towards crop enhancement. Plant Communications 1, (2020).

Luo, C., Fernie, A. R. & Yan, J. Single-Cell Genomics and Epigenomics: Technologies and Applications in Plants. Trends in Plant Science 25, 1030–1040 (2020).

Nunes-Nesi, A., Cavalcanti, J. H. F. & Fernie, A. R. Characterization of In Vivo Function(s) of Members of the Plant Mitochondrial Carrier Family. Biomolecules 10, (2020).

Rosado-Souza, L., Fernie, A. R. & Aarabi, F. Ascorbate and Thiamin: Metabolic Modulators in Plant Acclimation Responses. Plants 9, (2020).

Salem, M. A., de Souza, L. P., Serag, A., Fernie, A. R., Farag, M. A., Ezzat, S. M. & Alseekh, S. Metabolomics in the Context of Plant Natural Products Research: From Sample Preparation to Metabolite Analysis. Metabolites 10, (2020).

Tohge, T. & Fernie, A. R. Co-Regulation of Clustered and Neo-Functionalized Genes in Plant-Specialized Metabolism. Plants 9, (2020).

Toleco, M. R., Naake, T., Zhang, Y. J., Heazlewood, J. L. & Fernie, A. R. Plant Mitochondrial Carriers: Molecular Gatekeepers That Help to Regulate Plant Central Carbon Metabolism. Plants 9, (2020).

Gago, J., Carriquí, M., Nadal, M., Clemente-Moreno, M. J., Coopman, R. E., Fernie, A. R. & Flexas, J. Photosynthesis Optimized across Land Plant Phylogeny. Trends in Plant Science 24, 947–958 (2019).