Publications of E. Urbanczyk-Wochniak

Journal Article (16)

Journal Article
Sienkiewicz-Porzucek, A., Sulpice, R., Osorio, S., Krahnert, I., Leisse, A., Urbanczyk-Wochniak, E., Hodges, M., Fernie, A. R. & Nunes-Nesi, A. Mild Reductions in Mitochondrial NAD-Dependent Isocitrate Dehydrogenase Activity Result in Altered Nitrate Assimilation and Pigmentation But Do Not Impact Growth. Molecular Plant 3, 156–173 (2010).
Journal Article
Oliver, S. N., Lunn, J. E., Urbanczyk-Wochniak, E., Lytovchenko, A., van Dongen, J. T., Faix, B., Schmalzlin, E., Fernie, A. R. & Geigenberger, P. Decreased Expression of Cytosolic Pyruvate Kinase in Potato Tubers Leads to a Decline in Pyruvate Resulting in an in Vivo Repression of the Alternative Oxidase. Plant Physiology 148, 1640–1654 (2008).
Journal Article
Sienkiewicz-Porzucek, A., Nunes-Nesi, A., Sulpice, R., Lisec, J., Centeno, D. C., Carillo, P., Leisse, A., Urbanczyk-Wochniak, E. & Fernie, A. R. Mild reductions in mitochondrial citrate synthase activity result in a compromised nitrate assimilation and reduced leaf pigmentation but have no effect on photosynthetic performance or growth. Plant Physiology 147, 115–127 (2008).
Journal Article
Lemaitre, T., Urbanczyk-Wochniak, E., Flesch, V., Bismuth, E., Fernie, A. R. & Hodges, M. NAD-dependent isocitrate dehydrogenase mutants of arabidopsis suggest the enzyme is not limiting for nitrogen assimilation. Plant Physiology 144, 1546–1558 (2007).
Journal Article
Carrari, F., Baxter, C., Usadel, B., Urbanczyk-Wochniak, E., Zanor, M. I., Nunes-Nesi, A., Nikiforova, V., Centero, D., Ratzka, A., Pauly, M., Sweetlove, L. J. & Fernie, A. R. Integrated analysis of metabolite and transcript levels reveals the metabolic shifts that underlie tomato fruit development and highlight regulatory aspects of metabolic network behavior. Plant Physiology 142, 1380–1396 (2006).
Journal Article
Clement, B., Pollmann, S., Weiler, E., Urbanczyk-Wochniak, E. & Otten, L. The Agrobacterium vitis T-6b oncoprotein induces auxin-independent cell expansion in tobacco. Plant Journal 45, 1017–1027 (2006).
Journal Article
Fait, A., Angelovici, R., Less, H., Ohad, I., Urbanczyk-Wochniak, E., Fernie, A. R. & Galili, G. Arabidopsis seed development and germination is associated with temporally distinct metabolic switches. Plant Physiology 142, 839–854 (2006).
Journal Article
Urbanczyk-Wochniak, E., Usadel, B., Thimm, O., Nunes-Nesi, A., Carrari, F., Davy, M., Blaesing, O., Kowalczyk, M., Weicht, D., Polinceusz, A., Meyer, S., Stitt, M. & Fernie, A. R. Conversion of MapMan to allow the analysis of transcript data from Solanaceous species: Effects of genetic and environmental alterations in energy metabolism in the leaf. Plant Molecular Biology 60, 773–792 (2006).
Journal Article
Davies, H. V., Shepherd, L. V. T., Burrell, M. M., Carrari, F., Urbanczyk-Wochniak, E., Leisse, A., Hancock, R. D., Taylor, M., Viola, R., Ross, H., McRae, D., Willmitzer, L. & Fernie, A. R. Modulation of fructokinase activity of potato (Solanum tuberosum) results in substantial shifts in tuber metabolism. Plant and Cell Physiology 46, 1103–1115 (2005).
Journal Article
Geigenberger, P., Regierer, B., Nunes-Nesi, A., Leisse, A., Urbanczyk-Wochniak, E., Springer, F., van Dongen, J. T., Kossmann, J. & Fernie, A. R. Inhibition of de novo pyrimidine synthesis in growing potato tubers leads to a compensatory stimulation of the pyrimidine salvage pathway and a subsequent increase in biosynthetic performance. Plant Cell 17, 2077–2088 (2005).
Journal Article
Urbanczyk-Wochniak, E., Baxter, C., Kolbe, A., Kopka, J., Sweetlove, L. J. & Fernie, A. R. Profiling of diurnal patterns of metabolite and transcript abundance in potato (Solanum tuberosum) leaves. Planta 221, 891–903 (2005).
Journal Article
Urbanczyk-Wochniak, E. & Fernie, A. R. Metabolic profiling reveals altered nitrogen nutrient regimes have diverse effects on the metabolism of hydroponically-grown tomato (Solanum lycopersicum) plants. Journal of Experimental Botany 56, 309–321 (2005).
Journal Article
Carrari, F., Urbanczyk-Wochniak, E., Willmitzer, L. & Fernie, A. R. Engineering central metabolism in crop species: learning the system. Metabolic Engineering 5, 191–200 (2003).
Journal Article
Roessner-Tunali, U., Urbanczyk-Wochniak, E., Czechowski, T., Kolbe, A., Willmitzer, L. & Fernie, A. R. De novo amino acid biosynthesis in potato tubers is regulated by sucrose levels. Plant Physiology 133, 683–692 (2003).
Journal Article
Urbanczyk-Wochniak, E., Leisse, A., Roessner-Tunali, U., Lytovchenko, A., Reismeier, J., Willmitzer, L. & Fernie, A. R. Expression of a bacterial xylose isomerase in potato tubers results in an altered hexose composition and a consequent induction of metabolism. Plant and Cell Physiology 44, 1359–1367 (2003).
Journal Article
Urbanczyk-Wochniak, E., Luedemann, A., Kopka, J., Selbig, J., Roessner-Tunali, U., Willmitzer, L. & Fernie, A. R. Parallel analysis of transcript and metabolic profiles: a new approach in systems biology. EMBO Reports 4, 989–993 (2003).

Book Chapter (2)

Book Chapter
Urbanczyk-Wochniak, E., Willmitzer, L. & Fernie, A. R. in Metabolomics: Methods and Protocols (ed. Weckwerth, W.) 77–85 (Humana Press Inc., 2007). at <>
Book Chapter
Urbanczyk-Wochniak, E., Fernie, A. R. & Willmitzer, L. in Understanding the Plant Genome. (ed. Sadowski, J.) (Institute of Plant Genetics, PAS, 2004). at <>

Conference Paper (1)

Conference Paper
Urbanczyk-Wochniak, E., Baxter, C., Sweetlove, L. J. & Fernie, A. R. Profiling diurnal changes in metabolite and transcript levels in potato leaves. in 3rd International Congress on Plant Metabolomics 183–192 (2007). doi:10.1007/978-1-4020-5608-6_13

Meeting Abstract (1)

Meeting Abstract
Urbanczyk-Wochniak, E., Willmitzer, L. & Fernie, A. R. mRNA Analysis of Plant Metabolic Regulation: Comparison of Transcript and Metabolic Complements of Developing Plant Tissues. in Acta Physiologiae Plantarum 26, 55–55 (2004).
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