Publications of A. R. Fernie

Segarra-Medina, C., Pascual, L. S., Alseekh, S., Fernie, A. R., Rambla, J. L., Gómez-Cadenas, A. & Zandalinas, S. I. Comparison of metabolomic reconfiguration between Columbia and Landsberg ecotypes subjected to the combination of high salinity and increased irradiance. BMC Plant Biology 23, (2023).

Caldana, C., Carrari, F., Fernie, A. R. & Sampathkumar, A. How metabolism and development are intertwined in space and time. The Plant Journal 116, 347–359 (2023).

Chialva, M., Patono, D. L., de Souza, L. P., Novero, M., Vercellino, S., Maghrebi, M., Morgante, M., Lovisolo, C., Vigani, G., Fernie, A. R., Fiorilli, V., Lanfranco, L. & Bonfante, P. The mycorrhizal root-shoot axis elicits Coffea arabica growth under low phosphate conditions. New Phytologist 239, 271–285 (2023).

Chmielewski, M. W., Naya, S., Borghi, M., Cortese, J., Fernie, A. R., Swartz, M. T., Zografou, K., Sewall, B. J. & Spigler, R. B. Phenology and foraging bias contribute to sex-specific foraging patterns in the rare declining butterfly Argynnis idalia idalia. Ecology and Evolution 13, (2023).

Chmielewski, M. W., Naya, S., Borghi, M., Cortese, J., Fernie, A. R., Swartz, M. T., Zografou, K., Sewall, B. J. & Spigler, R. B. Phenology and foraging bias contribute to sex-specific foraging patterns in the rare declining butterfly Argynnis idalia idalia. Ecology and Evolution 13, (2023).

Fernie, A. R. & Alseekh, S. Phylogenomic discovery of deleterious mutants completes the potato breeding revolution. Molecular Plant 16, 1103–1105 (2023).

Salem, M. A., Aborehab, N. M., Abdelhafez, M. M., Ismail, S. H., Maurice, N. W., Azzam, M. A., Alseekh, S., Fernie, A. R., Salama, M. M. & Ezzat, S. M. Anti-Obesity Effect of a Tea Mixture Nano-Formulation on Rats Occurs via the Upregulation of AMP-Activated Protein Kinase/Sirtuin-1/Glucose Transporter Type 4 and Peroxisome Proliferator-Activated Receptor Gamma Pathways. Metabolites 13, (2023).

Wang, S., Li, R., Zhou, Y., Fernie, A. R., Ding, Z., Zhou, Q., Che, Y., Yao, Y., Liu, J., Wang, Y., Hu, X. & Guo, J. Integrated Characterization of Cassava (Manihot esculenta) Pectin Methylesterase (MePME) Genes to Filter Candidate Gene Responses to Multiple Abiotic Stresses. Plants 12, (2023).

Zhang, Y. J. & Fernie, A. R. Leveraging glycoside-targeted metabolomics to gain insight into biological function. Trends in Plant Science 28, 737–739 (2023).

Aarabi, F., Salem, M. A., Arrivault, S., Bulut, M., Schöttler, M. A., Giavalisco, P., Fernie, A. R. & Hoefgen, R. The regulation of sulfolipids under sulfur starvation. Plant Molecular Biology 112, 195–198 (2023).

Alseekh, S. & Fernie, A. R. Expanding our coverage: Strategies to detect a greater range of metabolites. Current Opinion in Plant Biology 73, (2023).

Cerqueira, J. V. A., de Andrade, T., M., Rafael, D. D., Zhu, F., Martins, S. V. C., Nunes-Nesi, A., Benedito, V., Fernie, A. R. & Zsögön, A. Anthocyanins and reactive oxygen species: a team of rivals regulating plant development? Plant Molecular Biology 112, 213–223 (2023).

Julca, I., Mutwil-Anderwald, D., Manoj, V., Khan, Z., Lai, S. K., Yang, L. K., Beh, I. T., Dziekan, J., Lim, Y. P., Lim, S. K., Low, Y. W., Lam, Y. I., Tjia, S., Mu, Y., Tan, Q. W., Nuc, P., Choo, L. M., Khew, G., Shining, L., Kam, A., Tam, J. P., Bozdech, Z., Schmidt, M., Usadel, B., Kanagasundaram, Y., Alseekh, S., Fernie, A. R., Li, H. Y. & Mutwil, M. Genomic, transcriptomic, and metabolomic analysis of Oldenlandia corymbosa reveals the biosynthesis and mode of action of anti-cancer metabolites. Journal of Integrative Plant Biology 65, 1442–1466 (2023).

Luzarowska, U., Ruß, A.-K., Joubès, J., Batsale, M., Szymański, J., Thirumalaikumar, V. P., Luzarowski, M., Wu, S., Zhu, F., Endres, N., Khedhayir, S., Schumacher, J., Jasinska, W., Xu, K., Cordoba, S. M. C., Weil, S., Skirycz, A., Fernie, A. R., Li-Beisson, Y., Fusari, C. M. & Brotman, Y. Hello darkness, my old friend: 3-KETOACYL-COENZYME A SYNTHASE4 is a branch point in the regulation of triacylglycerol synthesis in Arabidopsis thaliana. The Plant Cell 35, 1984–2005 (2023).

Souza, P. V. L., Hou, L.-Y., Sun, H., Poeker, L., Lehman, M., Bahadar, H., Domingues-Junior, A. P., Dard, A., Bariat, L., Reichheld, J.-P., Silveira, J. A. G., Fernie, A. R., Timm, S., Geigenberger, P. & Daloso, D. M. Plant NADPH-dependent thioredoxin reductases are crucial for the metabolism of sink leaves and plant acclimation to elevated CO2. Plant, Cell and Environment 46, 2337–2357 (2023).

Valifard, M., Fernie, A. R., Kitashova, A., Nägele, T., Schröder, R., Meinert, M., Pommerrenig, B., Mehner-Breitfeld, D., Witte, C.-P., Brüser, T., Keller, I. & Neuhaus, H. E. The novel chloroplast glucose transporter pGlcT2 affects adaptation to extended light periods. The Journal of Biological Chemistry 299, (2023).

Zhang, Q., Shi, Y., Hu, H., Shi, Y., Tang, D., Ruan, J., Fernie, A. R. & Liu, M.-Y. Magnesium promotes tea plant growth via enhanced glutamine synthetase-mediated nitrogen assimilation. Plant Physiology 192, 1321–1337 (2023).

Jia, Z.-C., Das, D., Zhang, Y. J., Fernie, A. R., Liu, Y.-G., Chen, M. & Zhang, J. Plant serine/arginine-rich proteins: versatile players in RNA processing. Planta 257, (2023).

López, C. M., Alseekh, S., Torralbo, F., Martinez Rivas, F. J., Fernie, A. R., Amil-Ruiz, F. & Alamillo, J. M. Transcriptomic and metabolomic analysis reveals that symbiotic nitrogen fixation enhances drought resistance in common bean. Journal of Experimental Botany 74, 3203–3219 (2023).

Martinez Rivas, F. J., Blanco-Portales, R., Pérez-Serratosa, M., Ric-Varas, P., Sánchez, V. G., Puche, L. M., Moyano, L., Mercado, J. Á., Alseekh, S., Caballero, J. L., Fernie, A. R., Muñoz-Blanco, J. & Molina-Hidalgo, F. J. FaMYB123 interacts with FabHLH3 to regulate the late steps of anthocyanin and flavonol accumulation during ripening. The Plant Journal 114, 683–698 (2023).