Publications of J. Kopka

Journal Article (207)

41.
Journal Article
Ulaszewska, M. M., Weinert, C. H., Trimigno, A., Portmann, R., Andres Lacueva, C., Badertscher, R., Brennan, L., Brunius, C., Bub, A., Capozzi, F., Rosso, M. C., Cordero, C. E., Daniel, H., Durand, S., Egert, B., Ferrario, P. G., Feskens, E. J. M., Franceschi, P., Garcia-Aloy, M., Giacomoni, F., Giesbertz, P., Gonzalez-Dominguez, R., Hanhineva, K., Hemeryck, L. Y., Kopka, J., Kulling, S. E., Llorach, R., Manach, C., Mattivi, F., Migne, C., Munger, L. H., Ott, B., Picone, G., Pimentel, G., Pujos-Guillot, E., Riccadonna, S., Rist, M. J., Rombouts, C., Rubert, J., Skurk, T., Harsha, P. S. C. S., Van Meulebroek, L., Vanhaecke, L., Vazquez-Fresno, R., Wishart, D. & Vergeres, G. Nutrimetabolomics: An Integrative Action for Metabolomic Analyses in Human Nutritional Studies. Molecular Nutriton & Food Research 63, (2019).
42.
Journal Article
Wenke, K., Kopka, J., Schwachtje, J., van Dongen, J. T. & Piechulla, B. Volatiles of rhizobacteria Serratia and Stenotrophomonas alter growth and metabolite composition of Arabidopsis thaliana. Plant Biology 21, 109–119 (2019).
43.
Journal Article
Zuther, E., Schaarschmidt, S., Fischer, A., Erban, A., Pagter, M., Mubeen, U., Giavalisco, P., Kopka, J., Sprenger, H. & Hincha, D. K. Molecular signatures associated with increased freezing tolerance due to low temperature memory in Arabidopsis. Plant, Cell and Environment 42, 854–873 (2019).
44.
Journal Article
Atanasov, K. E., Liu, C., Erban, A., Kopka, J., Parker, J. E. & Alcázar, R. NLR Mutations Suppressing Immune Hybrid Incompatibility and Their Effects on Disease Resistance. Plant Physiology 177, 1152–1169 (2018).
45.
Journal Article
Beine-Golovchuk, O., Firmino, A. A. P., Dabrowska, A., Schmidt, S., Erban, A., Walther, D., Zuther, E., Hincha, D. K. & Kopka, J. Plant Temperature Acclimation and Growth Rely on Cytosolic Ribosome Biogenesis Factor Homologs. Plant Physiology 176, 2251–2276 (2018).
46.
Journal Article
Geuss, D., Lortzing, T., Schwachtje, J., Kopka, J. & Steppuhn, A. Oviposition by Spodoptera exigua on Solanum dulcamara Alters the Plant’s Response to Herbivory and Impairs Larval Performance. International Journal of Molecular Sciences 19, (2018).
47.
Journal Article
Rai, S., Lucius, S., Kern, R., Bauwe, H., Kaplan, A., Kopka, J. & Hagemann, M. The Synechocystis sp PCC 6803 Genome Encodes Up to Four 2-Phosphoglycolate Phosphatases. Frontiers in Plant Science 9, (2018).
48.
Journal Article
Ruebsam, H., Kirsch, F., Reimann, V., Erban, A., Kopka, J., Hagemann, M., Hess, W. R. & Klaehn, S. The iron-stress activated RNA 1 (IsaR1) coordinates osmotic acclimation and iron starvation responses in the cyanobacterium Synechocystis sp PCC 6803. Environmental Microbiology Reports 20, 2757–2768 (2018).
49.
Journal Article
Schwachtje, J., Fischer, A., Erban, A. & Kopka, J. Primed primary metabolism in systemic leaves: a functional systems analysis. Scientific Reports 8, (2018).
50.
Journal Article
Sprenger, H., Erban, A., Seddig, S., Rudack, K., Thalhammer, A., Le, M. Q., Walther, D., Zuther, E., Koehl, K. I., Kopka, J. & Hincha, D. K. Metabolite and transcript markers for the prediction of potato drought tolerance. Plant Biotechnology Journal 16, 939–950 (2018).
51.
Journal Article
Dethloff, F., Orf, I. & Kopka, J. Rapid in situ 13C tracing of sucrose utilization in Arabidopsis sink and source leaves. Plant Methods 13, (2017).
52.
Journal Article
Pagter, M., Alpers, J., Erban, A., Kopka, J., Zuther, E. & Hincha, D. K. Rapid transcriptional and metabolic regulation of the deacclimation process in cold acclimated Arabidopsis thaliana. BMC Genomics 18, (2017).
53.
Journal Article
Andersen, U. B., Kjaer, K. H., Erban, A., Alpers, J., Hincha, D. K., Kopka, J., Zuther, E. & Pagter, M. Impact of seasonal warming on overwintering and spring phenology of blackcurrant. Environmental and Experimental Botany 140, 96–109 (2017).
54.
Journal Article
Glaubitz, U., Li, X., Schaedel, S., Erban, A., Sulpice, R., Kopka, J., Hincha, D. K. & Zuther, E. Integrated analysis of rice transcriptomic and metabolomic responses to elevated night temperatures identifies sensitivity- and tolerance-related profiles. Plant, Cell and Environment 40, 121–137 (2017).
55.
Journal Article
Heyneke, E., Watanabe, M., Erban, A., Duan, G. Y., Buchner, P., Walther, D., Kopka, J., Hawkesford, M. J. & Hoefgen, R. Characterization of the Wheat Leaf Metabolome during Grain Filling and under Varied N-Supply. Frontiers in Plant Science 8, (2017).
56.
Journal Article
Kopka, J., Schmidt, S., Dethloff, F., Pade, N., Berendt, S., Schottkowski, M., Martin, N., Dühring, U., Kuchmina, E., Enke, H., Kramer, D., Wilde, A., Hagemann, M. & Friedrich, A. Systems analysis of ethanol production in the genetically engineered cyanobacterium Synechococcus sp. PCC 7002. Biotechnology for Biofuels 10, (2017).
57.
Journal Article
Rahmoune, B., Morsli, A., Khelifi-Slaoui, M., Khelifi, L., Strueh, A., Erban, A., Kopka, J., Prell, J. & van Dongen, J. T. Isolation and characterization of three new PGPR and their effects on the growth of Arabidopsis and Datura plants. Journal of Plant Interaction 12, 1–6 (2017).
58.
Journal Article
Rotsch, A. H., Kopka, J., Feussner, I. & Ischebeck, T. Central metabolite and sterol profiling divides tobacco male gametophyte development and pollen tube growth into eight metabolic phases. The Plant Journal 92, 129–146 (2017).
59.
Journal Article
Treves, H., Murik, O., Kedem, I., Eisenstadt, D., Meir, S., Rogachev, I., Szymanski, J., Keren, N., Orf, I., Tiburcio, A. F., Alcazar, R., Aharoni, A., Kopka, J. & Kaplan, A. Metabolic Flexibility Underpins Growth Capabilities of the Fastest Growing Alga. Current Biology 27, 2559–2567 (2017).
60.
Journal Article
Zarza, X., Atanasov, K. E., Marco, F., Arbona, V., Carrasco, P., Kopka, J., Fotopoulos, V., Munnik, T., Gomez-Cadenas, A., Tiburcio, A. F. & Alcazar, R. Polyamine oxidase 5 loss-of-function mutations in Arabidopsis thaliana trigger metabolic and transcriptional reprogramming and promote salt stress tolerance. Plant, Cell and Environment 40, 527–542 (2017).
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