Publications of D. Walther

Journal Article (85)

21.
Journal Article
Beine-Golovchuk, O., Firmino, A. A. P., Dabrowska, A., Schmidt, S., Erban, A., Walther, D., Zuther, E., Hincha, D. K. & Kopka, J. Plant Temperature Acclimation and Growth Rely on Cytosolic Ribosome Biogenesis Factor Homologs. Plant Physiology 176, 2251–2276 (2018).
22.
Journal Article
Perlaza-Jiménez, L. & Walther, D. A genome-wide scan for correlated mutations detects macromolecular and chromatin interactions in Arabidopsis thaliana. Nucleic Acids Research 46, 8114–8132 (2018).
23.
Journal Article
Sprenger, H., Erban, A., Seddig, S., Rudack, K., Thalhammer, A., Le, M. Q., Walther, D., Zuther, E., Koehl, K. I., Kopka, J. & Hincha, D. K. Metabolite and transcript markers for the prediction of potato drought tolerance. Plant Biotechnology Journal 16, 939–950 (2018).
24.
Journal Article
Stoessel, D., Schulte, C., Teixeira dos Santos, M. C., Scheller, D., Rebollo-Mesa, I., Deuschle, C., Walther, D., Schauer, N., Berg, D., Nogueira da Costa, A. & Maetzler, W. Promising Metabolite Profiles in the Plasma and CSF of Early Clinical Parkinson's Disease. Frontiers in Aging Neuroscience 10, (2018).
25.
Journal Article
Stoessel, D., Stellmann, J.-P., Willing, A., Behrens, B., Rosenkranz, S. C., Hodecker, S. C., Stuerner, K. H., Reinhardt, S., Fleischer, S., Deuschle, C., Maetzler, W., Berg, D., Heesen, C., Walther, D., Schauer, N., Friese, M. A. & Pless, O. Metabolomic Profiles for Primary Progressive Multiple Sclerosis Stratification and Disease Course Monitoring. Frontiers in Human Neuroscience 12, (2018).
26.
Journal Article
Heyneke, E., Watanabe, M., Erban, A., Duan, G. Y., Buchner, P., Walther, D., Kopka, J., Hawkesford, M. J. & Hoefgen, R. Characterization of the Wheat Leaf Metabolome during Grain Filling and under Varied N-Supply. Frontiers in Plant Science 8, (2017).
27.
Journal Article
Korkuc, P. & Walther, D. Towards understanding the crosstalk between protein post-translational modifications: Homo- and heterotypic PTM pair distances on protein surfaces are not random. Proteins: Structure, Function, and Bioinformatics 85, 78–92 (2017).
28.
Journal Article
Ploetner, B., Nurmi, M., Fischer, A., Watanabe, M., Schneeberger, K., Holm, S., Vaid, N., Schöttler, M. A., Walther, D., Hoefgen, R., Weigel, D. & Laitinen, R. Chlorosis caused by two recessively interacting genes reveals a role of RNA helicase in hybrid breakdown in Arabidopsis thaliana. The Plant Journal 91, 251–262 (2017).
29.
Journal Article
Weissenborn, S. & Walther, D. Metabolic Pathway Assignment of Plant Genes based on Phylogenetic Profiling-A Feasibility Study. Frontiers in Plant Science 8, (2017).
30.
Journal Article
Korkuc, P. & Walther, D. Spatial proximity statistics suggest a regulatory role of protein phosphorylation on compound binding. Proteins-Structure Function and Bioinformatics 84, 565–579 (2016).
31.
Journal Article
Walther, D. & Kragler, F. Mobile RNAs convey the message. Nature Plants 2, (2016).
32.
Journal Article
Korkuc, P. & Walther, D. The Identification of Cis-Regulatory Sequence Motifs in Gene Promoters Based on SNP Information. PLANT SYNTHETIC PROMOTERS: METHODS AND PROTOCOLS 31–47 (2016). doi:10.1007/978-1-4939-6396-6_3
33.
Journal Article
Lis, M. & Walther, D. The orientation of transcription factor binding site motifs in gene promoter regions: does it matter? BMC Genomics 17, (2016).
34.
Journal Article
Sprenger, H., Kurowsky, C., Horn, R., Erban, A., Seddig, S., Rudack, K., Fischer, A., Walther, D., Zuther, E., Koehl, K. I., Hincha, D. K. & Kopka, J. The drought response of potato reference cultivars with contrasting tolerance. Plant Cell Environment 39, 2370–2389 (2016).
35.
Journal Article
Zhang, W., Thieme, C. J., Kollwig, G., Apelt, F., Yang, L., Winter, N., Andresen, N., Walther, D. & Kragler, F. tRNA-Related Sequences Trigger Systemic mRNA Transport in Plants. Plant Cell 28, 1237–1249 (2016).
36.
Journal Article
Salek, R. M., Neumann, S., Schober, D., Hummel, J., Billiau, K., Kopka, J., Correa, E., Reijmers, T., Rosato, A., Tenori, L., Turano, P., Marin, S., Deborde, C., Jacob, D., Rolin, D., Dartigues, B., Conesa, P., Haug, K., Rocca-Serra, P., O'Hagan, S., Hao, J., Vliet, M. van, Sysi-Aho, M., Ludwig, C., Bouwman, J., Cascante, M., Ebbels, T., Griffin, J. L., Moing, A., Nikolski, M., Oresic, M., Sansone, S.-A., Viant, M. R., Goodacre, R., Guenther, U. L., Hankemeier, T., Luchinat, C., Walther, D. & Steinbeck, C. COordination of Standards in MetabOlomicS (COSMOS): facilitating integrated metabolomics data access. Metabolomics 11, 1587–1597 (2015).
37.
Journal Article
Thieme, C. J., Rojas-Triana, M., Stecyk, E., Schudoma, C., Zhang, W., Yang, L., Minambres, M., Walther, D., Schulze, W. X., Paz-Ares, J., Scheible, W.-R. & Kragler, F. Endogenous Arabidopsis messenger RNAs transported to distant tissues. Nature Plants 1, (2015).
38.
Journal Article
Duan, G. Y. & Walther, D. The Roles of Post-translational Modifications in the Context of Protein Interaction Networks. PLoS Computational Biology 11, (2015).
39.
Journal Article
Duan, G. Y. & Walther, D. Computational phosphorylation network reconstruction: methods and resources. Methods in Molecular Biology 1306, 177–194 (2015).
40.
Journal Article
Korkuc, P. & Walther, D. Physicochemical characteristics of structurally determined metabolite-protein and drug-protein binding events with respect to binding specificity. Frontiers in molecular biosciences 2, (2015).
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