Publikationen von D. Walther

Zeitschriftenartikel (89)

1.
Zeitschriftenartikel
Murik, O., Geffen, O., Shotland, Y., Fernandez-Pozo, N., Ullrich, K. K., Walther, D., Rensing, S. A. & Treves, H. Genomic imprints of unparalleled growth. New Phytologist 241, 1144–1160 (2023).
2.
Zeitschriftenartikel
Back, G. & Walther, D. Predictions of DNA mechanical properties at a genomic scale reveal potentially new functional roles of DNA flexibility. NAR: genomics and bioinformatics 5, (2023).
3.
Zeitschriftenartikel
Giese, J., Eirich, J., Walther, D., Zhang, Y. J., Lassowskat, I., Fernie, A. R., Elsässer, M., Maurino, V. G., Schwarzländer, M. & Finkemeier, I. The interplay of post-translational protein modifications in Arabidopsis leaves during photosynthesis induction. The Plant Journal 116, 1172–1193 (2023).
4.
Zeitschriftenartikel
Weiszmann, J., Walther, D., Clauw, P., Back, G., Gunis, J., Reichardt, I., Koemeda, S., Jez, J., Nordborg, M., Schwarzerova, J., Pierides, I., Nägele, T. & Weckwerth, W. Metabolome plasticity in 241 Arabidopsis thaliana accessions reveals evolutionary cold adaptation processes. Plant Physiology 193, 980–1000 (2023).
5.
Zeitschriftenartikel
Qiu, Y., Li, Z., Walther, D. & Köhler, C. Updated phylogeny and protein structure predictions revise the hypothesis on the origin of MADS-box transcription factors in land plants. Molecular Biology and Evolution 40, (2023).
6.
Zeitschriftenartikel
Loiacono, F. V., Walther, D., Seeger, S., Thiele, W., Gerlach, I., Karcher, D., Schöttler, M. A., Zoschke, R. & Bock, R. Emergence of novel RNA editing sites by changes in the binding affinity of a conserved PPR protein. Molecular Biology and Evolution 39, (2022).
7.
Zeitschriftenartikel
Chen, L., Zhao, H., Chen, Y., Jiang, F., Zhou, F., Liu, Q., Fan, Y., Liu, T., Tu, W., Walther, D. & Song, B. Comparative transcriptomics analysis reveals a calcineurin B-like gene to positively regulate constitutive and acclimated freezing tolerance in potato. Plant, Cell and Environment 45, 3305–3321 (2022).
8.
Zeitschriftenartikel
Fischer, A., Dotzek, J., Walther, D. & Greiner, S. Graph-based models of the Oenothera mitochondrial genome capture the enormous complexity of higher plant mitochondrial DNA organization. NAR: genomics and bioinformatics 4, (2022).
9.
Zeitschriftenartikel
Hoang, Y., Gryzik, S., Hoppe, I., Rybak, A., Schädlich, M., Kadner, I., Walther, D., Vera, J., Radbruch, A., Groth, D., Baumgart, S. & Baumgrass, R. PRI: Re-analysis of a public mass cytometry dataset reveals patterns of effective tumor treatments. Frontiers in immunology 13, (2022).
10.
Zeitschriftenartikel
Thieme, S. & Walther, D. Biclique extension as an effective approach to identify missing links in metabolic compound-protein interaction networks. Bioinformatics advances 2, (2022).
11.
Zeitschriftenartikel
Martinez-Seidel, F., Hsieh, Y.-C., Walther, D., Kopka, J. & Firmino, A. A. P. COSNet(i): ComplexOme-Structural Network Interpreter used to study spatial enrichment in metazoan ribosomes. BMC Bioinformatics 22, (2021).
12.
Zeitschriftenartikel
Moreno, J. C., Rojas, B. E., Vicente, R., Gorka, M., Matz, T., Kosmacz, M., Peralta-Ariza, J. S., Zhang, Y. J., Alseekh, S., Childs, D., Luzarowski, M., Nikoloski, Z., Zarivach, R., Walther, D., Hartman, M. D., Figueroa, C. M., Iglesias, A. A., Fernie, A. R. & Skirycz, A. Tyr-Asp inhibition of glyceraldehyde 3-phosphate dehydrogenase affects plant redox metabolism. EMBO Journal 40, (2021).
13.
Zeitschriftenartikel
Back, G. & Walther, D. Identification of cis-regulatory motifs in first introns and the prediction of intron-mediated enhancement of gene expression in Arabidopsis thaliana. BMC Genomics 22, (2021).
14.
Zeitschriftenartikel
Kuang, J.-F., Wu, C.-J., Guo, Y.-F., Walther, D., Shan, W., Chen, J.-Y., Chen, L. & Lu, W.-J. Deciphering Transcriptional Regulators of Banana Fruit Ripening by Regulatory Network Analysis. Plant Biotechnology Journal 19, 477–489 (2021).
15.
Zeitschriftenartikel
Martinez-Seidel, F., Beine-Golovchuk, O., Hsieh, Y.-C., El Eshraky, K., Gorka, M., Cheong, B.-E., Jimenez‐posada, E. V., Walther, D., Skirycz, A., Roessner, U., Kopka, J. & Firmino, A. A. P. Spatially enriched paralog rearrangements argue functionally diverse ribosomes arise during cold acclimation in arabidopsis. International Journal of Molecular Sciences 22, (2021).
16.
Zeitschriftenartikel
Schumacher, C., Thümecke, S., Schilling, F., Koehl, K. I., Kopka, J., Sprenger, H., Hincha, D. K., Walther, D., Seddig, S., Peters, R., Zuther, E., Haas, M. & Horn, R. Genome-wide approach to identify quantitative trait loci for drought tolerance in tetraploid potato (Solanum tuberosum L.). International Journal of Molecular Sciences 22, (2021).
17.
Zeitschriftenartikel
Zaborowski, A. B. & Walther, D. Determinants of correlated expression of transcription factors and their target genes. Nucleic Acids Research 48, 11347–11369 (2020).
18.
Zeitschriftenartikel
Gottmann, P., Ouni, M., Zellner, L., Jähnert, M., Rittig, K., Walther, D. & Schürmann, A. Polymorphisms in miRNA binding sites involved in metabolic diseases in mice and humans. Scientific Reports 10, (2020).
19.
Zeitschriftenartikel
Haas, M., Sprenger, H., Zuther, E., Peters, R., Seddig, S., Walther, D., Kopka, J., Hincha, D. K. & Koehl, K. I. Can Metabolite- and Transcript-Based Selection for Drought Tolerance in Solanum tuberosum Replace Selection on Yield in Arid Environments? Frontiers in Plant Science 11, (2020).
20.
Zeitschriftenartikel
Kaiser, E., Walther, D. & Armbruster, U. Growth under fluctuating light reveals large trait variation in a panel of arabidopsis accessions. Plants 9, (2020).
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