Publications of F. Martinez-Seidel
All genres
Journal Article (17)
1.
Journal Article
Martinez-Seidel, F., , , , Erban, A., Medeiros, D. B., , , Kopka, J., , , , Fernie, A. R. & The serine-glycine-one carbon metabolic network orchestrates changes in nitrogen and sulfur metabolism and shapes plant development. The Plant Cell 36, 404–426 (2024).
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Journal Article
Martinez-Seidel, F., , , , Gentry-Torfer, D., , , , , , Kopka, J. & Dynamics of ribosome composition and ribosomal protein phosphorylation in immune signaling in Arabidopsis thaliana. Nucleic Acids Research 51, 11876–11892 (2023).
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Journal Article
Luzarowski, M., Martinez-Seidel, F., Moreno, J. C., , Ziemblicka, A., Sampathkumar, A., , , Kosmacz, M. & Skirycz, A. Protein interactome of 3’,5’-cyclic adenosine monophosphate reveals its role in regulating the actin cytoskeleton. The Plant Journal 115, 1214–1230 (2023).
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Journal Article
Martinez-Seidel, F., , , & Global transcriptome profiling reveals differential regulatory, metabolic and hormonal networks during somatic embryogenesis in Coffea arabica. BMC Genomics 24, (2023).
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Journal Article
Erban, A., Fehrle, I., Martinez-Seidel, F., Kopka, J., & Authenticity assessment of commercial bakery products with chia, flax and sesame seeds: Application of targeted and untargeted metabolomics results from seeds and lab-scale cookies. Food control 140, (2022).
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Journal Article
Martinez-Seidel, F., , , & The Effect of Cold Stress on the Root-Specific Lipidome of Two Wheat Varieties with Contrasting Cold Tolerance. Plants 11, (2022).
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Journal Article
Martinez-Seidel, F., Hsieh, Y.-C., Walther, D., Kopka, J. & Firmino, A. A. P. COSNet(i): ComplexOme-Structural Network Interpreter used to study spatial enrichment in metazoan ribosomes. BMC Bioinformatics 22, (2021).
8.
Journal Article
Beine-Golovchuk, O., Gorka, M., , Martinez-Seidel, F., Firmino, A. A. P., Skirycz, A., & Kopka, J. Arabidopsis REI-LIKE proteins activate ribosome biogenesis during cold acclimation. Scientific Reports 11, (2021).
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Journal Article
Martinez-Seidel, F., & Gone wild: Integration of antioxidative, physicochemical, volatilomic and sensorial profiles ratify rustic relatives of cherry tomato as ideal mating partners. Scientia Horticulturae 277, (2021).
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Journal Article
Martinez-Seidel, F., Beine-Golovchuk, O., Hsieh, Y.-C., El Eshraky, K., Gorka, M., Cheong, B.-E., , Walther, D., Skirycz, A., , Kopka, J. & Firmino, A. A. P. Spatially enriched paralog rearrangements argue functionally diverse ribosomes arise during cold acclimation in arabidopsis. International Journal of Molecular Sciences 22, (2021).
11.
Journal Article
Martinez-Seidel, F., , , , Firmino, A. A. P., , Kopka, J., & Membrane-Enriched Proteomics Link Ribosome Accumulation and Proteome Reprogramming With Cold Acclimation in Barley Root Meristems. Frontiers in Plant Science 12, (2021).
12.
Journal Article
Melo, T. O., , , Kopka, J., , Martinez-Seidel, F., & Univariate statistical analysis of gas chromatography – mass spectrometry fingerprints analyses. Chemical Data Collections 33, (2021).
13.
Journal Article
Martinez-Seidel, F., , , & The Metabolic Response of Brachypodium Roots to the Interaction with Beneficial Bacteria Is Affected by the Plant Nutritional Status. Metabolites 11, (2021).
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Journal Article
Firmino, A. A. P., Gorka, M., Graf, A., Skirycz, A., Martinez-Seidel, F., Zander, K., Kopka, J. & Beine-Golovchuk, O. Separation and paired proteome profiling of plant chloroplast and cytoplasmic ribosomes. Plants 9, (2020).
15.
Journal Article
Martinez-Seidel, F., , & Kopka, J. Systematic review of plant ribosome heterogeneity and specialization. Frontiers in Plant Science 11, (2020).
16.
Journal Article
Erban, A., Martinez-Seidel, F., Kopka, J., , , , , , , & Unravelling the Metabolic and Hormonal Machinery During Key Steps of Somatic Embryogenesis: A Case Study in Coffee. International Journal of Molecular Sciences 20, (2019).
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Journal Article
Erban, A., Fehrle, I., Martinez-Seidel, F., , , , & Kopka, J. Discovery of food identity markers by metabolomics and machine learning technology. Scientific Reports 9, (2019).
Book Chapter (1)
18.
Book Chapter
Erban, A., Martinez-Seidel, F., Rajarathinam, Y., Dethloff, F., Orf, I., Fehrle, I., Alpers, J., Beine-Golovchuk, O. & Kopka, J. in Plant Cold Acclimation: Methods in molecular biology (eds. Hincha, D. K. & Zuther, E.) 2156, 203–239 (2020).