Journal Article (69)

51.
Journal Article
Naake, T.; Zhu, F.; Alseekh, S.; Scossa, F.; de Souza, L. P.; Borghi, M.; Brotman, Y.; Mori, T.; Nakabayashi, R.; Tohge, T. et al.; Fernie, A. R.: Genome-wide association studies identify loci controlling specialized seed metabolites in Arabidopsis. Plant Physiology 194 (3), pp. 1705 - 1721 (2024)
52.
Journal Article
Timm, S.; Klaas, N.; Niemann, J.; Jahnke, K.; Alseekh, S.; Zhang, Y.; Souza, P.V.L.; Hou, L.-Y.; Cosse, M.; Selinski, J. et al.; Geigenberger, P.; Daloso, D.M.; Fernie, A. R.; Hagemann, M.: Thioredoxins o1 and h2 jointly adjust mitochondrial dihydrolipoamide dehydrogenase-dependent pathways towards changing environments. Plant, Cell and Environment 47 (7), pp. 2542 - 2560 (2024)
53.
Journal Article
Wang, H.; Li, L.; Ma, L.; Fernie, A. R.; Fu, A.; Bai, C.; Sang, Z.; Guo, S.; Zhang, F.; Wang, Q. et al.; Zheng, Y.; Zuo, J.: Revealing the specific regulations of nitric oxide on the postharvest ripening and senescence of bitter melon fruit. aBIOTECH 5, pp. 29 - 45 (2024)
54.
Journal Article
Zhu, A.; Liu, M.; Tian, Z.; Liu, W.; Hu, X.; Ao, M.; Jia, J.; Shi, T.; Liu, H.; Li, D. et al.; Mao, H.; Su, H.; Yan, W.; Li, Q.; Lan, C.; Fernie, A. R.; Chen, W.: Chemical-tag-based semi-annotated metabolomics facilitates gene identification and specialized metabolic pathway elucidation in wheat. The Plant Cell 36 (3), pp. 540 - 558 (2024)
55.
Journal Article
He, Y.; Zhang, K.; Shi, Y.; Lin, H.; Huang, X.; Lu, X.; Wang, Z.; Li, W.; Feng, X.; Shi, T. et al.; Chen, Q.; Wang, J.; Tang, Y.; Chapman, M. A.; Germ, M.; Luthar, Z.; Kreft, I.; Janovská, D.; Meglič, V.; Woo, S.-H.; Quinet, M.; Fernie, A. R.; Liu, X.; Zhou, M.: Genomic insight into the origin, domestication, dispersal, diversification and human selection of Tartary buckwheat. Genome Biology: Biology for the Post-Genomic Era 25 (1), 61 (2024)
56.
Journal Article
Borghi, M.; Pacifico, D.; Crucitti, D.; Squartini, A.; Berger, M.M.J.; Gamboni, M.; Carimi, F.; Lehad, A.; Costa, A.; Gallusci, P. et al.; Fernie, A. R.; Zottini, M.: Smart selection of soil microbes for resilient and sustainable viticulture. The Plant Journal 118 (5), pp. 1258 - 1267 (2024)
57.
Journal Article
Boutoub, O.; Jadhav, S.; Zheng, X.; El Ghadraoui, L.; Al Babili, S.; Fernie, A. R.; Figueiredo, A.C.; Miguel, M.G.; Borghi, M.: Biochemical characterization of Euphorbia resinifera floral cyathia. Journal of Plant Physiology 293, 154184 (2024)
58.
Journal Article
Dziubek, D.; Poeker, L.; Siemiatkowska, B.; Graf, A.; Marino, G.; Alseekh, S.; Arrivault, S.; Fernie, A. R.; Armbruster, U.; Geigenberger, P.: NTRC and thioredoxins m1/m2 underpin the light acclimation of plants on proteome and metabolome levels. Plant Physiology 194, pp. 982 - 1005 (2024)
59.
Journal Article
Elbanna, A. H.; Abdelghany, S.; Alseekh, S.; Fernie, A. R.; Farag, M. A.: Seasonal and taxa impact on edible sea cucumber metabolome as analyzed via a multiplex approach of mass spectroscopy-based metabolomics. Food Bioscience 57, 103456 (2024)
60.
Journal Article
Fuchs, P.; Feixes-Prats, E.; Arruda, P.; Feitosa-Araújo, E.; Fernie, A. R.; Grefen, C.; Lichtenauer, S.; Linka, N.; de Godoy Maia, I.; Meyer, A. J. et al.; Schilasky, S.; Sweetlove, L. J.; Wege, S.; Weber, A. P. M.; Millar, A. H.; Keech, O.; Florez-Sarasa, I.; Barreto, P.; Schwarzländer, M.: PLANT UNCOUPLING MITOCHONDRIAL PROTEIN 2 localizes to the Golgi. Plant Physiology 194 (2), pp. 623 - 628 (2024)
61.
Journal Article
Pereira, A.M.; Martins, A.O.; Batista-Silva, W.; Condori-Apfata, J.A.; Silva, V.F.; Oliveira, L.A.; Andrade, E.S.; Martins, S.C.V.; Medeiros, D.B.; Nascimento, V.L. et al.; Fernie, A. R.; Nunes-Nesi, A.; Araújo, W.L.: Differential content of leaf and fruit pigment in tomatoes culminate in a complex metabolic reprogramming without growth impacts. Journal of Plant Physiology 293, 154170 (2024)
62.
Journal Article
Rosa-Téllez, S.; Alcántara-Enguídanos, A.; Martinez-Seidel, F.; Casatejada-Anchel, R.; Saeheng, S.; Bailes, C. L.; Erban, A.; Medeiros, D.B.; Alepúz, P.; Matus, J. T. et al.; Kopka, J.; Muñoz-Bertomeu, J.; Krueger, S.; Roje, S.; Fernie, A. R.; Ros, R.: The serine-glycine-one carbon metabolic network orchestrates changes in nitrogen and sulfur metabolism and shapes plant development. The Plant Cell 36 (2), koad256, pp. 404 - 426 (2024)
63.
Journal Article
Sun, Y.; Zhou, Y.; Long, Q.; Xing, J.; Guo, P.; Liu, Y.; Zhang, C.; Zhang, Y.; Fernie, A. R.; Shi, Y. et al.; Luo, Y.; Luo, J.; Jin, C.: OsBCAT2, a gene responsible for the degradation of branched-chain amino acids, positively regulates salt tolerance by promoting the synthesis of vitamin B5. New Phytologist 241 (6), pp. 2558 - 2574 (2024)
64.
Journal Article
Carreno-Quintero, N.; Tohge, T.; Van Acker, R.; McKee, L.S.; Zhou, Q.; Bolze, A.; Xing, X.; Özparpucu, M.; Rüggeberg, M.; Piofczyk, T. et al.; Koram, Y.; Bulone, V.; Boerjan, W.; Fernie, A. R.; Fraser, P.D.: Non-targeted discovery of high-value bio-products in Nicotiana glauca L: a potential renewable plant feedstock. Bioresources and Bioprocessing 11, 12 (2024)
65.
Journal Article
Liu, N.; Du, Y.; Yan, S.; Chen, W.; Deng, M.; Xu, S.; Wang, H.; Zhan, W.; Huang, W.; Yin, Y. et al.; Yang, X.; Zhao, Q.; Fernie, A. R.; Yan, J.: The light and hypoxia induced gene ZmPORB1 determines tocopherol content in the maize kernel. Science China Life Sciences 67, pp. 435 - 448 (2024)
66.
Journal Article
Daubermann, A. G.; Lima, V. F.; Erban, A.; Kopka, J.; Fernie, A. R.; Schwarzländer, M.; dos Anjos, L.; Daloso, D. M.: Novel guard cell sink characteristics revealed by a multi-species/cell-types meta-analysis of 13C-labelling experiments. Theoretical and Experimental Plant Physiology (2024)
67.
Journal Article
Hayashi, K.; Fernie, A. R.: Genomic evidence of a transposon-conferred adaptive response. Cell Reports 43 (12), 115009 (2024)
68.
Journal Article
Li, J.; Martin, C.; Fernie, A. R.: Biofortification’s contribution to mitigating micronutrient deficiencies. Nature Food 5, pp. 19 - 27 (2024)
69.
Journal Article
Lv, Y.; Zhu, J.; Huang, S.; Xing, X.; Zhou, S.; Yao, H.; Yang, Z.; Liu, L.; Huang, S.; Miao, Y. et al.; Liu, X.; Fernie, A. R.; Ding, Y.; Luo, J.: Metabolome profiling and transcriptome analysis filling the early crucial missing steps of piperine biosynthesis in Piper nigrum L. The Plant Journal 117 (1), pp. 107 - 120 (2024)

Book Chapter (1)

70.
Book Chapter
Zhang, Y.; Qin, K.; Fernie, A. R.: Plant Tissue Culture and Metabolite Profiling for High-Value Natural Product Synthesis. In: Methods in Modern Biology, Vol. 2827, pp. 405 - 416 (Eds. Loyola-Vargas, V.; Ochoa-Alejo, N.) (2024)

Editorial (1)

71.
Editorial
Denby, K.; Treves, H.; Bohlmann, J.; Fernie, A. R.: Announcement of the 2024 TPJ fellows. The Plant Journal 120 (5), p. 1699 - 1699 (2024)

Review Article (14)

72.
Review Article
Petersen, M.; Avin-Wittenberg, T.; Bassham, D. C.; Dagdas, Y.; Fan, C.; Fernie, A. R.; Jiang, L.; Mishra, D.; Otegui, M. S.; Rodriguez, E. et al.; Hofius, D.: Autophagy in plants. Autophagy Reports 3 (1), 2395731 (2024)
73.
Review Article
Ye, X.; Qin, K.; Fernie, A. R.; Zhang, Y.: Prospects for synthetic biology in 21st Century agriculture. International Journal of Genetics and Genomics (2024)
74.
Review Article
de Vries, J.; de Vries, S.; Fernie, A. R.: Current and future perspectives for enhancing our understanding of the evolution of plant metabolism. Philosophical Transactions B 379 (1914), 20240253 (2024)
75.
Review Article
Fernie, A. R.; de Vries, S.; de Vries, J.: Evolution of plant metabolism: the state-of-the-art. Philosophical Transactions of the Royal Society of London, Series B: Biological Sciences 379 (1914), 20230347 (2024)
76.
Review Article
Fernie, A. R.; Liu, F.; Zhang, Y.: Post-genomic illumination of paclitaxel biosynthesis. Nature Plants 10, pp. 1875 - 1885 (2024)
77.
Review Article
Sun, Y.; Yuan, H.; Fernie, A. R.: Harnessing plant-associated microorganism to alleviate the detrimental effects of environmental abiotic stresses on medicinal plants. Medicinal Plant Biology 3, e024 (2024)
78.
Review Article
Yu, Y.; Alseekh, S.; Zhu, Z.; Zhou , K.; Fernie, A. R.: Multiomics and biotechnologies for understanding and influencing cadmium accumulation and stress response in plants. Plant Biotechnology Journal 22 (10), pp. 2641 - 2659 (2024)
79.
Review Article
Fischer, H.D.; Fernie, A.; Skirycz, A.: Using protein–metabolite interactions to identify novel plant metabolite receptors. Phytochemistry Reviews (2024)
80.
Review Article
Qu, Y.; Fernie, A. R.; Liu, J.; Yan, J.: Doubled haploid technology and synthetic apomixis: Recent advances and applications in future crop breeding. Molecular Plant 17 (7), pp. 1005 - 1018 (2024)
81.
Review Article
Sun, Y.; Fernie, A. R.: Plant secondary metabolism in a fluctuating world: climate change perspectives. Trends in Plant Science 29 (5), pp. 560 - 571 (2024)
82.
Review Article
Martinez Rivas, F.J.; Fernie, A. R.: Metabolomics to understand metabolic regulation underpinning fruit ripening, development, and quality. Journal of Experimental Botany 75 (6), pp. 1726 - 1740 (2024)
83.
Review Article
Yoshida, T.; Fernie, A. R.: Hormonal regulation of plant primary metabolism under drought. Journal of Experimental Botany 75 (6), pp. 1714 - 1725 (2024)
84.
Review Article
Artins, A.; Martins, M. C. M.; Meyer, C.; Fernie, A. R.; Caldana, C.: Sensing and regulation of C and N metabolism – novel features and mechanisms of the TOR and SnRK1 signaling pathways. The Plant Journal 118 (5), pp. 1268 - 1280 (2024)
85.
Review Article
Li, H.; Che, R.; Zhu, J.; Yang, X.; Li, J.; Fernie, A. R.; Yan, J.: Multi-omics-driven advances in the understanding of triacylglycerol biosynthesis in oil seeds. The Plant Journal 117 (4), pp. 999 - 1017 (2024)
Go to Editor View