Publications of Joachim Kopka

Journal Article (13)

1.
Journal Article
Salek, R. M.; Neumann, S.; Schober, D.; Hummel, J.; Billiau, K.; Kopka, J.; Correa, E.; Reijmers, T.; Rosato, A.; Tenori, L. et al.; Turano, P.; Marin, S.; Deborde, C.; Jacob, D.; Rolin, D.; Dartigues, B.; Conesa, P.; Haug, K.; Rocca-Serra, P.; O'Hagan, S.; Hao, J.; Vliet, M. v.; Sysi-Aho, M.; Ludwig, C.; Bouwman, J.; Cascante, M.; Ebbels, T.; Griffin, J. L.; Moing, A.; Nikolski, M.; Oresic, M.; Sansone, S.-A.; Viant, M. R.; Goodacre, R.; Guenther, U. L.; Hankemeier, T.; Luchinat, C.; Walther, D.; Steinbeck, C.: COordination of Standards in MetabOlomicS (COSMOS): facilitating integrated metabolomics data access. Metabolomics 11 (6), pp. 1587 - 1597 (2015)
2.
Journal Article
Koehler, G.; Rohloff, J.; Wilson, R. C.; Kopka, J.; Erban, A.; Winge, P.; Bones, A. M.; Davik, J.; Alsheikh, M. K.; Randall, S. K.: Integrative "omic" analysis reveals distinctive cold responses in leaves and roots of strawberry, Fragaria x ananassa 'Korona'. Frontiers in Plant Science 6, 826 (2015)
3.
Journal Article
Agudelo-Romero, P.; Erban, A.; Rego, C.; Carbonell-Bejerano, P.; Nascimento, T.; Sousa, L.; Martinez-Zapater, J. M.; Kopka, J.; Fortes, A. M.: Transcriptome and metabolome reprogramming in Vitis vinifera cv. Trincadeira berries upon infection with Botrytis cinerea. Journal of Experimental Botany 66 (7), pp. 1769 - 1785 (2015)
4.
Journal Article
Richter, J. A.; Erban, A.; Kopka, J.; Zoerb, C.: Metabolic contribution to salt stress in two maize hybrids with contrasting resistance. Plant Science 233, pp. 107 - 115 (2015)
5.
Journal Article
Kohl, S.; Hollmann, J.; Erban, A.; Kopka, J.; Riewe, D.; Weschke, W.; Weber, H.: Metabolic and transcriptional transitions in barley glumes reveal a role as transitory resource buffers during endosperm filling. Journal of Experimental Botany 66 (5), pp. 1397 - 1411 (2015)
6.
Journal Article
Dobritzsch, S.; Weyhe, M.; Schubert, R.; Dindas, J.; Hause, G.; Kopka, J.; Hause, B.: Dissection of jasmonate functions in tomato stamen development by transcriptome and metabolome analyses. BMC Biology 13, 28 (2015)
7.
Journal Article
Gaude, N.; Bortfeld, S.; Erban, A.; Kopka, J.; Krajinski, F.: Symbiosis dependent accumulation of primary metabolites in arbuscule-containing cells. BMC Plant Biology 15 (1), 234 (2015)
8.
Journal Article
Glaubitz, U.; Erban, A.; Kopka, J.; Hincha, D. K.; Zuther, E.: High night temperature strongly impacts TCA cycle, amino acid and polyamine biosynthetic pathways in rice in a sensitivity-dependent manner. Journal of Experimental Botany 66 (20), pp. 6385 - 6397 (2015)
9.
Journal Article
Klähn, S.; Orf, I.; Schwarz, D.; Matthiessen, J. K. F.; Kopka, J.; Hess, W. R.; Hagemann, M.: Integrated Transcriptomic and Metabolomic Characterization of the Low-Carbon Response Using an ndhR Mutant of Synechocystis sp. PCC 6803. Plant physiology 169 (3), pp. 1540 - 156 (2015)
10.
Journal Article
Li, X.; Lawas, L. M. F.; Malo, R.; Glaubitz, U.; Erban, A.; Mauleon, R.; Heuer, S.; Zuther, E.; Kopka, J.; Hincha, D. K. et al.; Jagadish, K. S. V.: Metabolic and transcriptomic signatures of rice floral organs reveal sugar starvation as a factor in reproductive failure under heat and drought stress. Plant, Cell and Environment 38 (10), pp. 2171 - 2192 (2015)
11.
Journal Article
Orf, I.; Klähn, S.; Schwarz, D.; Frank, M.; Hess, W. R.; Hagemann, M.; Kopka, J.: Integrated Analysis of Engineered Carbon Limitation in a Quadruple CO2/HCO3- Uptake Mutant of Synechocystis sp. PCC 6803. Plant Cell Physiology 169 (3), pp. 1787 - 1806 (2015)
12.
Journal Article
Pant, B.-D.; Pant, P.; Erban, A.; Huhman, D.; Kopka, J.; Scheible, W.-R.: Identification of primary and secondary metabolites with phosphorus status-dependent abundance in Arabidopsis, and of the transcription factor PHR1 as a major regulator of metabolic changes during phosphorus limitation. Plant, Cell and Environment 38 (1), pp. 172 - 187 (2015)
13.
Journal Article
Sprenger, H.; Rudack, K.; Schudoma, C.; Neumann, A.; Seddig, S.; Peters, R.; Zuther, E.; Kopka, J.; Hincha, D. K.; Walther, D. et al.; Koehl, K. I.: Assessment of drought tolerance and its potential yield penalty in potato. Functional Plant Biology 42 (7), pp. 655 - 667 (2015)

Conference Paper (2)

14.
Conference Paper
Glaubitz, U.; Erban, A.; Kopka, J.; Hincha, D. K.; Zuther, E.: Metabolite Profiling Reveals Sensitivity-Dependent Metabolic Shifts in Rice (Oryza Sativa L.) Cultivars under High Night Temperature Stress. In: Agriculture and Climate Change - Adapting Crops to increased uncertainty (Agri 2015), p. 72 - 72. 4th International Conference on Agriculture and Horticulture (AGRI), Beijing, PEOPLES R CHINA, July 13, 2015 - July 15, 2015. (2015)
15.
Conference Paper
Zuther, E.; Li, X.; Lawas, L. M. F.; Malo, R.; Glaubitz, U.; Erban, A.; Mauleon, R.; Heuer, S.; Kopka, J.; Hincha, D. K. et al.; Jagadish, K. S. V.: Sugar Starvation of Rice Anthers is a Factor in Reproductive Failure under Heat and Drought Stress, as shown by Metabolite and Transcript Profiling. In: Agriculture and Climate Change - Adapting Crops to Increased Uncertainty (Agri 2015), pp. 70 - 71. 4th International Conference on Agriculture and Horticulture (AGRI), Beijing, PEOPLES R CHINA, July 13, 2015 - July 15, 2015. (2015)
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