Publications of Joachim Kopka

Journal Article (16)

Journal Article
Lawas, L.M.F.; Erban, A.; Kopka, J.; Jagadish, S. V. K.; Zuther, E.; Hincha, D. K.: Metabolic responses of rice source and sink organs during recovery from combined drought and heat stress in the field. GigaScience 8 (8), giz102 (2019)
Journal Article
Lawas, L.M.F.; Li, X.; Erban, A.; Kopka, J.; Jagadish, S. V. K.; Zuther, E.; Hincha, D. K.: Metabolic responses of rice cultivars with different tolerance to combined drought and heat stress under field conditions. GigaScience 8 (5), giz050 (2019)
Journal Article
Armarego-Marriott, T.; Kowalewska, L.; Burgos, A.; Fischer, A.; Thiele, W.; Erban, A.; Strand, D.; Kahlau, S.; Hertle, A. P.; Kopka, J. et al.; Walther, D.; Reich, Z.; Schöttler, M. A.; Bock, R.: Highly Resolved Systems Biology to Dissect the Etioplast-to-Chloroplast Transition in Tobacco Leaves. Plant Physiology 180 (1), pp. 654 - 681 (2019)
Journal Article
Awada, R.; Campa, C.; Gibault, E.; Dechamp, E.; Georget, F.; Lepelley, M.; Abdallah, C.; Erban, A.; Martinez-Seidel, F.; Kopka, J. et al.; Legendre, L.; Leran, S.; Conejero, G.; Verdeil, J.-L.; Crouzillat, D.; Breton, D.; Bertrand, B.; Etienne, H.: Unravelling the Metabolic and Hormonal Machinery During Key Steps of Somatic Embryogenesis: A Case Study in Coffee. International Journal of Molecular Sciences 20 (19), 4665 (2019)
Journal Article
Calabrese, S.; Cusant, L.; Sarazin, A.; Niehl, A.; Erban, A.; Brulé, D.; Recorbet, G.; Wipf, D.; Roux, C.; Kopka, J. et al.; Boller, T.; Courty, P.-E.: Imbalanced regulation of fungal nutrient transports according to phosphate availability in a symbiocosm formed by poplar, sorghum and Rhizophagus irregularis. Frontiers in Plant Science 10, 1617 (2019)
Journal Article
Erban, A.; Fehrle, I.; Martinez-Seidel, F.; Brigante, F.; Más, A. L.; Baroni, V.; Wunderlin, D.; Kopka, J.: Discovery of food identity markers by metabolomics and machine learning technology. Scientific Reports 9 (1), 9697 (2019)
Journal Article
Heyneke, E.; Watanabe, M.; Erban, A.; Duan, G.; Buchner, P.; Walther, D.; Kopka, J.; Hawkesford, M. J.; Hoefgen, R.: Effect of Senescence Phenotypes and Nitrate Availability on Wheat Leaf Metabolome during Grain Filling. Agronomy 9 (6), 305 (2019)
Journal Article
Li, L.; Krznar, P.; Erban, A.; Agazzi, A.; Martin-Levilain, J.; Supale, S.; Kopka, J.; Zamboni, N.; Maechler, P.: Metabolomics identifies a biomarker revealing in vivo loss of functional β-cell mass before diabetes onset. Diabetes 68 (12), pp. 2272 - 2286 (2019)
Journal Article
Madhavan, S.; Paranidharan, V.; Erban, A.; Al-Sadi, A.M.; Kopka, J.; Velazhahan, R.: The metabolic response of suspension-cultured cells from blast-resistant and -susceptible rice (Oryza sativa L.) genotypes to a Pyricularia oryzae elicitor. Indian Phytopathology 72 (2), pp. 195 - 202 (2019)
Journal Article
Nieva, A.S.; Vilas, J.M.; Gárriz, A.; Maiale, S.J.; Menéndez, A.B.; Erban, A.; Kopka, J.; Ruiz, O.A.: The fungal endophyte Fusarium solani provokes differential effects on the fitness of two Lotus species. Plant Physiology and Biochemistry 144, pp. 100 - 109 (2019)
Journal Article
Richter, J. A.; Behr, J. H.; Erban, A.; Kopka, J.; Zoerb, C.: Ion-dependent metabolic responses of Vicia faba L. to salt stress. Plant, Cell and Environment 42 (1-SI), pp. 295 - 309 (2019)
Journal Article
Schwachtje, J.; Whitcomb, S. J.; Firmino, A.; Zuther, E.; Hincha, D. K.; Kopka, J.: Induced, Imprinted, and Primed Responses to Changing Environments: Does Metabolism Store and Process Information? Frontiers in Plant Science 10, 106 (2019)
Journal Article
Takahashi, D.; Gorka, M.; Erban, A.; Graf, A.; Kopka, J.; Zuther, E.; Hincha, D. K.: Both cold and sub-zero acclimation induce cell wall modification and changes in the extracellular proteome in Arabidopsis thaliana. Scientific Reports 9 (1), 2289 (2019)
Journal Article
Ulaszewska, M. M.; Weinert, C. H.; Trimigno, A.; Portmann, R.; Andres Lacueva, C.; Badertscher, R.; Brennan, L.; Brunius, C.; Bub, A.; Capozzi, F. et al.; Rosso, M. C.; Cordero, C. E.; Daniel, H.; Durand, S.; Egert, B.; Ferrario, P. G.; Feskens, E. J. M.; Franceschi, P.; Garcia-Aloy, M.; Giacomoni, F.; Giesbertz, P.; Gonzalez-Dominguez, R.; Hanhineva, K.; Hemeryck, L. Y.; Kopka, J.; Kulling, S. E.; Llorach, R.; Manach, C.; Mattivi, F.; Migne, C.; Munger, L. H.; Ott, B.; Picone, G.; Pimentel, G.; Pujos-Guillot, E.; Riccadonna, S.; Rist, M. J.; Rombouts, C.; Rubert, J.; Skurk, T.; Harsha, P. S. C. S.; Van Meulebroek, L.; Vanhaecke, L.; Vazquez-Fresno, R.; Wishart, D.; Vergeres, G.: Nutrimetabolomics: An Integrative Action for Metabolomic Analyses in Human Nutritional Studies. Molecular Nutriton & Food Research 63 (1-SI), 1800384 (2019)
Journal Article
Wenke, K.; Kopka, J.; Schwachtje, J.; van Dongen, J. T.; Piechulla, B.: Volatiles of rhizobacteria Serratia and Stenotrophomonas alter growth and metabolite composition of Arabidopsis thaliana. Plant Biology 21 (SI suppl.), pp. 109 - 119 (2019)
Journal Article
Zuther, E.; Schaarschmidt, S.; Fischer, A.; Erban, A.; Pagter, M.; Mubeen, U.; Giavalisco, P.; Kopka, J.; Sprenger, H.; Hincha, D. K.: Molecular signatures associated with increased freezing tolerance due to low temperature memory in Arabidopsis. Plant, Cell and Environment 42 (3- SI), pp. 854 - 873 (2019)

Editorial (1)

Hanson, A. D.; Hibberd, J. M.; Koffas, M. A. G.; Kopka, J.; Wurtzel, E. T.: Focus Issue Editorial: Synthetic Biology. Plant Physiology 179 (3), pp. 772 - 774 (2019)
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