Publications of S. Alseekh

Kong, F., Burlacot, A., Liang, Y., Legeret, B., Alseekh, S., Brotman, Y., Fernie, A. R., Krieger-Liszkay, A., Beisson, F., Peltier, G. & Li-Beisson, Y. Interorganelle Communication: Peroxisomal MALATE DEHYDROGENASE2 Connects Lipid Catabolism to Photosynthesis through Redox Coupling in Chlamydomonas. Plant Cell 30, 1824–1847 (2018).

Nietzsche, M., Guerra, T., Alseekh, S., Wiermer, M., Sonnewald, S., Fernie, A. R. & Börnkea, F. STOREKEEPER RELATED1/G-element binding protein (STKR1) interacts with protein kinase SnRK1. Plant Physiology 176, 1773–1792 (2018).

Rosa-Tellez, S., Djoro Anoman, A., Flores-Tornero, M., Toujani, W., Alseekh, S., Fernie, A. R., Nebauer, S. G., Munoz-Bertomeu, J., Segura, J. & Ros, R. Phosphoglycerate Kinases Are Co-Regulated to Adjust Metabolism and to Optimize Growth. Plant Physiology 176, 1182–1198 (2018).

Wen, W., Jin, M., Li, K., Liu, H., Xiao, Y., Zhao, M., Alseekh, S., Li, W., de Abreu e Lima, F., Brotman, Y., Willmitzer, L., Fernie, A. R. & Yan, J. An integrated multi-layered analysis of the metabolic networks of different tissues uncovers key genetic components of primary metabolism in maize. The Plant Journal 93, 1116–1128 (2018).

Zhang, Y. J., Swart, C., Alseekh, S., Scossa, F., Jiang, L., Obata, T., Graf, A. & Fernie, A. R. The Extra-Pathway Interactome of the TCA Cycle: Expected and Unexpected Metabolic Interactions. Plant Physiology 177, 966–979 (2018).

Alseekh, S., Tong, H., Scossa, F., Brotman, Y., Vigroux, F., Tohge, T., Ofner, I., Zamir, D., Nikoloski, Z. & Fernie, A. R. Canalization of Tomato Fruit Metabolism. Plant Cell 29, 2753–2765 (2017).

Flores-Tornero, M., Anoman, A. D., Rosa-Tellez, S., Toujani, W., Weber, A. P. M., Eisenhut, M., Kurz, S., Alseekh, S., Fernie, A. R., Munoz-Bertomeu, J. & Ros, R. Overexpression of the triose phosphate translocator (TPT) complements the abnormal metabolism and development of plastidial glycolytic glyceraldehyde-3-phosphate dehydrogenase mutants. The Plant Journal 89, 1146–1158 (2017).

Malinova, I., Alseekh, S., Feil, R., Fernie, A. R., Baumann, O., Schöttler, M. A., Lunn, J. E. & Fettke, J. Starch synthase 4 and plastidal phosphorylase differentially affect starch granule number and morphology. Plant Physiology 174, 73–85 (2017).

Nelson, D. R., Khraiwesh, B., Fu, W., Alseekh, S., Jaiswal, A., Chaiboonchoe, A., Hazzouri, K. M., O'Connor, M. J., Butterfoss, G. L., Drou, N., Rowe, J. D., Harb, J., Fernie, A. R., Gunsalus, K. C. & Salehi-Ashtiani, K. The genome and phenome of the green alga Chloroidium sp. UTEX 3007 reveal adaptive traits for desert acclimatization. eLife 6, (2017).

Schmidt, M. H.-W., Vogel, A., Denton, A. K., Istace, B., Wormit, A., van de Geest, H., Bolger, M. E., Alseekh, S., Mass, J., Pfaff, C., Schurr, U., Chetelat, R., Maumus, F., Aury, J.-M., Koren, S., Fernie, A. R., Zamir, D., Bolger, A. M. & Usadel, B. De Novo Assembly of a New Solanum pennellii Accession Using Nanopore Sequencing. The Plant Cell 29, 2336–2348 (2017).

Shahnejat-Bushehri, S., Allu, A. D., Mehterov, N., Thirumalaikumar, V. P., Alseekh, S., Fernie, A. R., Mueller-Roeber, B. & Balazadeh, S. Arabidopsis NAC Transcription Factor JUNGBRUNNEN1 Exerts Conserved Control Over Gibberellin and Brassinosteroid Metabolism and Signaling Genes in Tomato. Frontiers in Plant Science 8, (2017).

Garcia, V., Bres, C., Just, D., Fernandez, L., Tai, F. W. J., Mauxion, J.-P., Le Paslier, M.-C., Bérard, A., Brunel, D., Aoki, K., Alseekh, S., Fernie, A. R., Fraser, P. D. & Rothan, & C. Rapid identification of causal mutations in tomato EMS populations via mapping-by-sequencing. Nature Protocols 11, 2401–2418 (2016).

Kerchev, P., Waszczak, C., Lewandowska, A., Willems, P., Shapiguzov, A., Li, Z., Alseekh, S., Mühlenbock, P., Hoeberichts, F. A., Huang, J., Van Der Kelen, K., Kangasjärvi, J., Fernie, A. R., De Smet, R., Van de Peer, Y., Messens, J. & Van Breusegem, F. Lack of GLYCOLATE OXIDASE1, but not GLYCOLATE OXIDASE2, attenuates the photorespiratory phenotype of CATALASE2-deficient Arabidopsis. Plant Physiology 171, 1704–1719 (2016).

Liu, Z., Alseekh, S., Brotman, Y., Zheng, Y., Fei, Z., Tieman, D., Giovannoni, J., Fernie, A. R. & Klee, H. Identification of a Solanum pennellii Chromosome 4 Fruit Flavor and Nutritional Quality-Associated Metabolite QTL. Frontiers in Plant Science 7, (2016).

Wu, S., Alseekh, S., Cuadros-Inostroza, A. C., Fusari, C. M., Mutwil, M., Kooke, R., Keurentjes, J. B., Fernie, A. R., Willmitzer, L. & Brotman, Y. Combined Use of Genome-Wide Association Data and Correlation Networks Unravels Key Regulators of Primary Metabolism in Arabidopsis thaliana. PLoS Genetics 12, (2016).

Alseekh, S., Tohge, T., Wendenburg, R., Scossa, F., Omranian, N., Li, J., Kleessen, S., Giavalisco, P., Pleban, T., Mueller-Roeber, B., Zamir, D., Nikoloski, Z. & Fernie, A. R. Identification and mode of inheritance of quantitative trait Loci for secondary metabolite abundance in tomato. The Plant Cell 27, 485–512 (2015).

Avin-Wittenberg, T., Bajdzienko, K., Wittenberg, G., Alseekh, S., Tohge, T., Bock, R., Giavalisco, P. & Fernie, A. R. Global Analysis of the Role of Autophagy in Cellular Metabolism and Energy Homeostasis in Arabidopsis Seedlings under Carbon Starvation. The Plant Cell 27, 306–322 (2015).

Harb, J., Alseekh, S., Tohge, T. & Fernie, A. R. Profiling of primary metabolites and flavonols in leaves of two table grape varieties collected from semiarid and temperate regions. Phytochemistry 117, 444–455 (2015).

Weiwei, W., Li, K., Alseekh, S., Omranian, N., Zhao, L., Zhou, Y., Xiao, Y., Jin, M., Yang, N., Liu, H., Florian, A., Li, W., Pan, Q., Nikoloski, Z., Yan, J. & Fernie, A. R. Genetic Determinants of the Network of Primary Metabolism and Their Relationships to Plant Performance in a Maize Recombinant Inbred Line Population. The Plant Cell 27, 1839–1856 (2015).

Zhang, Y., Butelli, E., Alseekh, S., Tohge, T., Rallapalli, G., Luo, J., Kawar, P. G., Hill, L., Santino, A., Fernie, A. R. & Martin, C. Multi-level engineering facilitates the production of phenylpropanoid compounds in tomato. Nature communications 6, (2015).