Publications of P. Durek

Draffehn, A. M., Durek, P., Nunes-Nesi, A., Stich, B., Fernie, A. R. & Gebhardt, C. Tapping natural variation at functional level reveals allele specific molecular characteristics of potato invertase Pain-1. Plant, Cell and Environment 35, 2143–2154 (2012).

Durek, P., Schmidt, R., Heazlewood, J. L., Jones, A., MacLean, D., Nagel, A., Kersten, B. & Schulze, W. X. PhosPhAt: the Arabidopsis thaliana phosphorylation site database. An update. Nucleic Acids Research 38, D828–D834 (2010).

Riano-Pachon, D. M., Kleessen, S., Neigenfind, Durek, P., Weber, E., Engelsberger, W. R., Walther, D., Selbig, J., Schulze, W. X. & Kersten, B. Proteome-wide survey of phosphorylation patterns affected by nuclear DNA polymorphisms in Arabidopsis thaliana. BMC Genomics 11, 411 (2010).

Walther, D., Strassburg, K., Durek, P. & Kopka, J. Metabolic Pathway Relationships Revealed by an Integrative Analysis of the Transcriptional and Metabolic Temperature Stress-Response Dynamics in Yeast. OMICS: A Journal of Integrative Biology 14, 261–274 (2010).

Durek, P., Schudoma, C., Weckwerth, W., Selbig, J. & Walther, D. Detection and characterization of 3D-signature phosphorylation site motifs and their contribution towards improved phosphorylation site prediction in proteins. BMC Bioinformatics 10, 117 (2009).

Durek, P. & Walther, D. The integrated analysis of metabolic and protein interaction networks reveals novel molecular organizing principles. BMC Systems Biology 2, 100 (2008).

Heazlewood, J. L., Durek, P., Hummel, J., Selbig, J., Weckwerth, W., Walther, D. & Schulze, W. X. PhosPhAt: a database of phosphorylation sites in Arabidopsis thaliana and a plant-specific phosphorylation site predictor. Nucleic Acids Research 36, D1015–D1021 (2008).

Kersten, B., Agrawal, G. K., Durek, P., Neigenfind, J., Schulze, W. X., Walther, D. & Rakwal, R. Plant phosphoproteomics: An update. Proteomics 9, 964–988 (2009).