Publications of the Group

251.

Journal Article

Diaz, C.; Kusano, M.; Sulpice, R.; Araki, M.; Redestig, H.; Saito, K.; Stitt, M.; Shin, R.: Determining novel functions of Arabidopsis 14-3-3 proteins in central metabolic processes. BMC Systems Biology 5, p. 192 - 192 (2011)

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252.

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Caldana, C.; Degenkolbe, T.; Cuadros-Inostroza, A.; Klie, S.; Sulpice, R.; Leisse, A.; Steinhauser, D.; Fernie, A. R.; Willmitzer, L.; Hannah, M. A.: High-density kinetic analysis of the metabolomic and transcriptomic response of Arabidopsis to eight environmental conditions. The Plant Journal 67 (5), pp. 869 - 884 (2011)

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253.

Journal Article

Carillo, P.; Parisi, D.; Woodrow, P.; Pontecorvo, G.; Massaro, G.; Annunziata, M. G.; Fuggi, A.; Sulpice, R.: Salt-induced accumulation of glycine betaine is inhibited by high light in durum wheat. Functional Plant Biology 38 (2), pp. 139 - 150 (2011)

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254.

Journal Article

Centeno, D. C.; Osorio, S.; Nunes-Nesi, A.; Bertolo, A. L. F.; Carneiro, R. T.; Araujo, W. L.; Steinhauser, M.-C.; Michalska, J.; Rohrmann, J.; Geigenberger, P. et al.; Oliver, S. N.; Stitt, M.; Carrari, F.; Rose, J. K. C.; Fernie, A. R.: Malate Plays a Crucial Role in Starch Metabolism, Ripening, and Soluble Solid Content of Tomato Fruit and Affects Postharvest Softening. The Plant Cell 23 (1), pp. 162 - 184 (2011)

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255.

Journal Article

Gutzat, R.; Borghi, L.; Fuetterer, J.; Bischof, S.; Laizet, Y.; Hennig, L.; Feil, R.; Lunn, J.; Gruissem, W.: RETINOBLASTOMA-RELATED PROTEIN controls the transition to autotrophic plant development. Development 138 (14), pp. 2977 - 2986 (2011)

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256.

Journal Article

Haedrich, N.; Gibon, Y.; Schudoma, C.; Altmann, T.; Lunn, J. E.; Stitt, M.: Use of TILLING and robotised enzyme assays to generate an allelic series of Arabidopsis thaliana mutants with altered ADP-glucose pyrophosphorylase activity. Journal of Plant Physiology 168 (12), pp. 1395 - 1405 (2011)

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257.

Journal Article

Huege, J.; Krall, L.; Steinhauser, M.-C.; Giavalisco, P.; Rippka, R.; de Marsac, N. T.; Steinhauser, D.: Sample amount alternatives for data adjustment in comparative cyanobacterial metabolomics. Analytical and Bioanalytical Chemistry 399 (10), pp. 3503 - 3517 (2011)

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258.

Journal Article

Krueger, S.; Giavalisco, P.; Krall, L.; Steinhauser, M.-C.; Buessis, D.; Usadel, B.; Fluegge, U.-I.; Fernie, A. R.; Willmitzer, L.; Steinhauser, D.: A Topological Map of the Compartmentalized Arabidopsis thaliana Leaf Metabolome. PLoS One 6 (3), p. e17806 (2011)

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259.

Journal Article

Lytovchenko, A.; Eickmeier, I.; Pons, C.; Osorio, S.; Szecowka, M.; Lehmberg, K.; Arrivault, S.; Tohge, T.; Pineda, B.; Anton, M. T. et al.; Hedtke, B.; Lu, Y.; Fisahn, J.; Bock, R.; Stitt, M.; Grimm, B.; Granell, A.; Fernie, A. R.: Tomato fruit photosynthesis is seemingly unimportant in primary metabolism and ripening but plays a considerable role in seed development. Plant Physiology 157 (4), pp. 1650 - 1663 (2011)

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260.

Journal Article

Marin, I. C.; Loef, I.; Bartetzko, L.; Searle, I.; Coupland, G.; Stitt, M.; Osuna, D.: Nitrate regulates floral induction in Arabidopsis, acting independently of light, gibberellin and autonomous pathways. Planta 233 (3), pp. 539 - 552 (2011)

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261.

Journal Article

Moing, A.; Aharoni, A.; Biais, B.; Rogachev, I.; Meir, S.; Brodsky, L.; Allwood, J. W.; Erban, A.; Dunn, W. B.; Kay, L. et al.; de Koning, S.; de Vos, R. C. H.; Jonker, H.; Mumm, R.; Deborde, C.; Maucourt, M.; Bernillon, S.; Gibon, Y.; Hansen, T. H.; Husted, S.; Goodacre, R.; Kopka, J.; Schjoerring, J. K.; Rolin, D.; Hall, R. D.: Extensive metabolic cross-talk in melon fruit revealed by spatial and developmental combinatorial metabolomics. New Phytologist 190 (3), pp. 683 - 696 (2011)

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262.

Journal Article

Nagel, A.; Lohse, M.; Bolger, A.; Bolger, A. M.; Stitt, M.; Usadel, B.: Visualizing large, high-throughput datasets based on the cognitive representation of biological pathways. Human Vision and Electronic Imaging Xvi 7865, p. 78650h (2011)

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263.

Journal Article

Steinhauser, M.-C.; Steinhauser, D.; Gibon, Y.; Bolger, M.; Arrivault, S.; Usadel, B.; Zamir, D.; Fernie, A. R.; Stitt, M.: Identification of Enzyme Activity Quantitative Trait Loci in a Solanum lycopersicum X Solanum pennellii Introgression Line Population. Plant Physiology 157 (3), pp. 998 - 1014 (2011)

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264.

Journal Article

Thiel, J.; Rolletschek, H.; Friedel, S.; Lunn, J. E.; Nguyen, T. H.; Feil, R.; Tschiersch, H.; Mueller, M.; Borisjuk, L.: Seed-specific elevation of non-symbiotic hemoglobin AtHb1: beneficial effects and underlying molecular networks in Arabidopsis thaliana. BMC Plant Biology 11, p. 48 (2011)

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265.

Journal Article

Tohge, T.; Mettler, T.; Arrivault, S.; Carroll, A. J.; Stitt, M.; Fernie, A. R.: From models to crop species: caveats and solutions for translational metabolomics. Frontiers in Plant Science 2, p. 61 (2011)

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266.

Journal Article

Yazdanbakhsh, N.; Sulpice, R.; Graf, A.; Stitt, M.; Fisahn, J.: Circadian control of root elongation and C partitioning in Arabidopsis thaliana. Plant Cell and Environment 34 (6), pp. 877 - 894 (2011)

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267.

Journal Article

Childs, L. H.; Witucka-Wall, H.; Gunther, T.; Sulpice, R.; Korff, M. V.; Stitt, M.; Walther, D.; Schmid, K. J.; Altmann, T.: Single feature polymorphism (SFP)-based selective sweep identification and association mapping of growth-related metabolic traits in Arabidopsis thaliana. BMC Genomics 11, p. 188 (2010)

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268.

Journal Article

Gomez, L. D.; Gilday, A.; Feil, R.; Lunn, J. E.; Graham, I. A.: AtTPS1-mediated trehalose 6-phosphate synthesis is essential for embryogenic and vegetative growth and responsiveness to ABA in germinating seeds and stomatal guard cells. The Plant Journal 64 (1), pp. 1 - 13 (2010)

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269.

Journal Article

Gonzalez, N.; de Bodt, S.; Sulpice, R.; Jikumaru, Y.; Chae, E.; Dhondt, S.; van Daele, T.; de Milde, L.; Weigel, D.; Kamiya, Y. et al.; Stitt, M.; Beemster, G. T. S.; Inze, D.: Increased Leaf Size: Different Means to an End. Plant Physiology 153 (3), pp. 1261 - 1279 (2010)

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270.

Journal Article

Graf, A.; Schlereth, A.; Stitt, M.; Smith, A. M.: Circadian control of carbohydrate availability for growth in Arabidopsis plants at night. Proceedings of the National Academy of Sciences of the United States of America 107 (20), pp. 9458 - 9463 (2010)

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271.

Journal Article

Hummel, I.; Pantin, F.; Sulpice, R.; Piques, M.; Rolland, G.; Dauzat, M.; Christophe, A.; Pervent, M.; Bouteille, M.; Stitt, M. et al.; Gibon, Y.; Muller, B.: Arabidopsis Plants Acclimate to Water Deficit at Low Cost through Changes of Carbon Usage: An Integrated Perspective Using Growth, Metabolite, Enzyme, and Gene Expression Analysis. Plant Physiology 154 (1), pp. 357 - 372 (2010)

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272.

Journal Article

Lohse, M.; Nunes-Nesi, A.; Krueger, P.; Nagel, A.; Hannemann, J.; Giorgi, F. M.; Childs, L.; Osorio, S.; Walther, D.; Selbig, J. et al.; Sreenivasulu, N.; Stitt, M.; Fernie, A. R.; Usadel, B.: Robin: An Intuitive Wizard Application for R-Based Expression Microarray Quality Assessment and Analysis. Plant Physiology 153 (2), pp. 642 - 651 (2010)

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273.

Journal Article

Madrid, E.; Gil, J.; Rubiales, D.; Krajinski, F.; Schlereth, A.; Millan, T.: Transcription factor profiling leading to the identification of putative transcription factors involved in the Medicago truncatula-Uromyces striatus interaction. Theoretical and Applied Genetics 121 (7), pp. 1311 - 1321 (2010)

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274.

Journal Article

Mathieu-Rivet, E.; Gevaudant, F.; Sicard, A.; Salar, S.; Do, P. T.; Mouras, A.; Fernie, A. R.; Gibon, Y.; Rothan, C.; Chevalier, C. et al.; Hernould, M.: Functional analysis of the anaphase promoting complex activator CCS52A highlights the crucial role of endo-reduplication for fruit growth in tomato. The Plant Journal 62 (5), pp. 727 - 741 (2010)

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275.

Journal Article

Parent, B.; Turc, O.; Gibon, Y.; Stitt, M.; Tardieu, F.: Modelling temperature-compensated physiological rates, based on the co-ordination of responses to temperature of developmental processes. Journal of Experimental Botany 61 (8), pp. 2057 - 2069 (2010)

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276.

Journal Article

Phuc, T. D.; Prudent, M.; Sulpice, R.; Causse, M.; Fernie, A. R.: The Influence of Fruit Load on the Tomato Pericarp Metabolome in a Solanum chmielewskii Introgression Line Population. Plant Physiology 154 (3), pp. 1128 - 1142 (2010)

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277.

Journal Article

Pracharoenwattana, I.; Zhou, W. X.; Keech, O.; Francisco, P. B.; Udomchalothorn, T.; Tschoep, H.; Stitt, M.; Gibon, Y.; Smith, S. M.: Arabidopsis has a cytosolic fumarase required for the massive allocation of photosynthate into fumaric acid and for rapid plant growth on high nitrogen. Plant Journal 62 (5), pp. 785 - 795 (2010)

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278.

Journal Article

Radchuk, R.; Emery, R. J. N.; Weier, D.; Vigeolas, H.; Geigenberger, P.; Lunn, J. E.; Feil, R.; Weschke, W.; Weber, H.: Sucrose non-fermenting kinase 1 (SnRK1) coordinates metabolic and hormonal signals during pea cotyledon growth and differentiation. The Plant Journal 61 (2), pp. 324 - 338 (2010)

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279.

Journal Article

Sajitz-Hermstein, M.; Nikoloski, Z.: A novel approach for determining environment-specific protein costs: the case of Arabidopsis thaliana. Bioinformatics 26 (18), pp. i582 - i588 (2010)

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280.

Journal Article

Sienkiewicz-Porzucek, A.; Sulpice, R.; Osorio, S.; Krahnert, I.; Leisse, A.; Urbanczyk-Wochniak, E.; Hodges, M.; Fernie, A. R.; Nunes-Nesi, A.: Mild Reductions in Mitochondrial NAD-Dependent Isocitrate Dehydrogenase Activity Result in Altered Nitrate Assimilation and Pigmentation But Do Not Impact Growth. Molecular Plant 3 (1), pp. 156 - 173 (2010)

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281.

Journal Article

Steinhauser, M.-C.; Steinhauser, D.; Koehl, K. I.; Carrari, F.; Gibon, Y.; Fernie, A. R.; Stitt, M.: Enzyme Activity Profiles during Fruit Development in Tomato Cultivars and Solanum pennellii. Plant Physiology 153 (1), pp. 80 - 98 (2010)

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282.

Journal Article

Stitt, M.; Lunn, J.; Usadel, B.: Arabidopsis and primary photosynthetic metabolism - more than the icing on the cake. The Plant Journal 61 (6), pp. 1067 - 1091 (2010)

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283.

Journal Article

Sulpice, R.; Sienkiewicz-Porzucek, A.; Osorio, S.; Krahnert, I.; Stitt, M.; Fernie, A. R.; Nunes-Nesi, A.: Mild reductions in cytosolic NADP-dependent isocitrate dehydrogenase activity result in lower amino acid contents and pigmentation without impacting growth. Amino Acids 39 (4), pp. 1055 - 1066 (2010)

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284.

Journal Article

Sulpice, R.; Trenkamp, S.; Steinfath, M.; Usadel, B.; Gibon, Y.; Witucka-Wall, H.; Pyl, E. T.; Tschoep, H.; Steinhauser, M.-C.; Guenther, M. et al.; Hoehne, M.; Rohwer, J. M.; Altmann, T.; Fernie, A. R.; Stitt, M.: Network analysis of enzyme activities and metabolite levels and their relationship to biomass in a large panel of Arabidopsis accessions. The Plant Cell 22 (8), pp. 2872 - 2893 (2010)

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285.

Journal Article

van der Merwe, M. J.; Groenewald, J. H.; Stitt, M.; Kossmann, J.; Botha, F. C.: Downregulation of pyrophosphate: d-fructose-6-phosphate 1-phosphotransferase activity in sugarcane culms enhances sucrose accumulation due to elevated hexose-phosphate levels. Planta 231 (3), pp. 595 - 608 (2010)

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286.

Journal Article

Zhang, N.; Gibon, Y.; Gur, A.; Chen, C.; Lepak, N.; Hoehne, M.; Zhang, Z.; Kroon, D.; Tschoep, H.; Stitt, M. et al.; Buckler, E.: Fine Quantitative Trait Loci Mapping of Carbon and Nitrogen Metabolism Enzyme Activities and Seedling Biomass in the Maize IBM Mapping Population. Plant Physiology 154 (4), pp. 1753 - 1765 (2010)

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287.

Journal Article

Zhang, N. Y.; Gur, A.; Gibon, Y.; Sulpice, R.; Flint-Garcia, S.; McMullen, M. D.; Stitt, M.; Buckler, E. S.: Genetic Analysis of Central Carbon Metabolism Unveils an Amino Acid Substitution That Alters Maize NAD-Dependent Isocitrate Dehydrogenase Activity. PLoS One 5 (4), p. e9991 (2010)

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288.

Journal Article

Armengaud, P.; Sulpice, R.; Miller, A. J.; Stitt, M.; Amtmann, A.; Gibon, Y.: Multilevel Analysis of Primary Metabolism Provides New Insights into the Role of Potassium Nutrition for Glycolysis and Nitrogen Assimilation in Arabidopsis Roots. Plant Physiology 150 (2), pp. 772 - 785 (2009)

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289.

Journal Article

Armengaud, P.; Zambaux, K.; Hills, A.; Sulpice, R.; Pattison, R. J.; Blatt, M. R.; Amtmann, A.: EZ-Rhizo: integrated software for the fast and accurate measurement of root system architecture. The Plant Journal 57 (5), pp. 945 - 956 (2009)

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290.

Journal Article

Arrivault, S.; Guenther, M.; Ivakov, A.; Feil, R.; Vosloh, D.; van Dongen, J. T.; Sulpice, R.; Stitt, M.: Use of reverse-phase liquid chromatography, linked to tandem mass spectrometry, to profile the Calvin cycle and other metabolic intermediates in Arabidopsis rosettes at different carbon dioxide concentrations. Plant Journal 59 (5), pp. 824 - 839 (2009)

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291.

Journal Article

Barratt, D. H. P.; Derbyshire, P.; Findlay, K.; Pike, M.; Wellner, N.; Lunn, J.; Feil, R.; Simpson, C.; Maule, A. J.; Smith, A. M.: Normal growth of Arabidopsis requires cytosolic invertase but not sucrose synthase. Proceedings of the National Academy of Sciences of the United States of America 106 (31), pp. 13124 - 13129 (2009)

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292.

Journal Article

Gibon, Y.; Pyl, E. T.; Sulpice, R.; Lunn, J. E.; Hoehne, M.; Guenther, M.; Stitt, M.: Adjustment of growth, starch turnover, protein content and central metabolism to a decrease of the carbon supply when Arabidopsis is grown in very short photoperiods. Plant Cell and Environment 32 (7), pp. 859 - 874 (2009)

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293.

Journal Article

Hannemann, J.; Poorter, H.; Usadel, B.; Blaesing, O. E.; Finck, A.; Tardieu, F.; Atkin, O. K.; Pons, T.; Stitt, M.; Gibon, Y.: Xeml Lab: a tool that supports the design of experiments at a graphical interface and generates computer-readable metadata files, which capture information about genotypes, growth conditions, environmental perturbations and sampling strategy. Plant Cell and Environment 32 (9), pp. 1185 - 1200 (2009)

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294.

Journal Article

Keurentjes, J. J.; Sulpice, R.: The role of natural variation in dissecting genetic regulation of primary metabolism. Plant Signaling & Behavior 4 (3), pp. 244 - 246 (2009)

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295.

Journal Article

Lippold, F.; Sanchez, D. H.; Musialak-Lange, M.; Schlereth, A.; Scheible, W.-R.; Hincha, D. K.; Udvardi, M. K.: AtMyb41 Regulates Transcriptional and Metabolic Responses to Osmotic Stress in Arabidopsis. Plant Physiology 149 (4), pp. 1761 - 1772 (2009)

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296.

Journal Article

Michalska, J.; Zauber, H.; Buchanan, B. B.; Cejudo, F. J.; Geigenberger, P.: NTRC links built-in thioredoxin to light and sucrose in regulating starch synthesis in chloroplasts and amyloplasts. Proceedings of the National Academy of Sciences of the United States of America 106 (24), pp. 9908 - 9913 (2009)

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297.

Journal Article

Ott, T.; Sullivan, J.; James, E. K.; Flemetakis, E.; Gunther, C.; Gibon, Y.; Ronson, C.; Udvardi, M. K.: Absence of Symbiotic Leghemoglobins Alters Bacteroid and Plant Cell Differentiation During Development of Lotus japonicus Root Nodules. Molecular Plant-Microbe Interactions 22 (7), pp. 800 - 808 (2009)

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298.

Journal Article

Piques, M.; Schulze, W. X.; Hoehne, M.; Usadel, B.; Gibon, Y.; Rohwer, J.; Stitt, M.: Ribosome and transcript copy numbers, polysome occupancy and enzyme dynamics in Arabidopsis. Molecular Systems Biology 5, p. 314 (2009)

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299.

Journal Article

Rotter, A.; Camps, C.; Lohse, M.; Kappel, C.; Pilati, S.; Hren, M.; Stitt, M.; Coutos-Thevenot, P.; Moser, C.; Usadel, B. et al.; Delrot, S.; Gruden, K.: Gene expression profiling in susceptible interaction of grapevine with its fungal pathogen Eutypa lata: Extending MapMan ontology for grapevine. BMC Plant Biology 9, p. 104 (2009)

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300.

Journal Article

Sulpice, R.; Pyl, E. T.; Ishihara, H.; Trenkamp, S.; Steinfath, M.; Witucka-Wall, H.; Gibon, Y.; Usadel, B.; Poree, F.; Piques, M. C. et al.; von Korff, M.; Steinhauser, M.-C.; Keurentjes, J. J. B.; Guenther, M.; Hoehne, M.; Selbig, J.; Fernie, A. R.; Altmann, T.; Stitt, M.: Starch as a major integrator in the regulation of plant growth. Proceedings of the National Academy of Sciences of the United States of America 106 (25), pp. 10348 - 10353 (2009)

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Journal Article (394)