Publications of the Group

Max Planck Institute of Molecular Plant Physiology

Journal Article (398)

351.

Journal Article

Rigano, V. D.; Vona, V.; Lobosco, O.; Carillo, P.; Lunn, J. E.; Carfagna, S.; Esposito, S.; Caiazzo, M.; Rigano, C.: Temperature dependence of nitrate reductase in the psychrophilic unicellular alga Koliella antarctica and the mesophilic alga Chlorella sorokiniana. Plant Cell and Environment 29 (7), pp. 1400 - 1409 (2006)

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352.

Journal Article

Rogers, A.; Gibon, Y.; Stitt, M.; Morgan, P. B.; Bernacchi, C. J.; Ort, D. R.; Long, S. P.: Increased C availability at elevated carbon dioxide concentration improves N assimilation in a legume. Plant Cell and Environment 29 (8), pp. 1651 - 1658 (2006)

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353.

Journal Article

Sveshnikov, D.; Ensminger, I.; Ivanov, A. G.; Campbell, D.; Lloyd, J.; Funk, C.; Huner, N. P. A.; Oquist, G.: Excitation energy partitioning and quenching during cold acclimation in Scots pine. Tree Physiology 26 (3), pp. 325 - 336 (2006)

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354.

Journal Article

Urbanczyk-Wochniak, E.; Usadel, B.; Thimm, O.; Nunes-Nesi, A.; Carrari, F.; Davy, M.; Blaesing, O.; Kowalczyk, M.; Weicht, D.; Polinceusz, A. et al.; Meyer, S.; Stitt, M.; Fernie, A. R.: Conversion of MapMan to allow the analysis of transcript data from Solanaceous species: Effects of genetic and environmental alterations in energy metabolism in the leaf. Plant Molecular Biology 60 (5), pp. 773 - 792 (2006)

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355.

Journal Article

Blaesing, O. E.; Gibon, Y.; Guenther, M.; Hoehne, M.; Morcuende, R.; Osuna, D.; Thimm, O.; Usadel, B.; Scheible, W.-R.; Stitt, M.: Sugars and circadian regulation make major contributions to the global regulation of diurnal gene expression in Arabidopsis. Plant Cell 17 (12), pp. 3257 - 3281 (2005)

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356.

Journal Article

Carrari, F.; Coll-Garcia, D.; Schauer, N.; Lytovchenko, A.; Palacios-Rojas, N.; Balbo, I.; Rosso, M.; Fernie, A. R.: Deficiency of a plastidial adenylate kinase in Arabidopsis results in elevated photosynthetic amino acid biosynthesis and enhanced growth. Plant Physiology 137 (1), pp. 70 - 82 (2005)

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357.

Journal Article

Czechowski, T.; Stitt, M.; Altmann, T.; Udvardi, M. K.; Scheible, W.-R.: Genome-wide identification and testing of superior reference genes for transcript normalization in Arabidopsis. Plant Physiology 139 (1), pp. 5 - 17 (2005)

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358.

Journal Article

Fernie, A. R.; Geigenberger, P.; Stitt, M.: Flux an important, but neglected, component of functional glenomics. Current Opinion in Plant Biology 8 (2), pp. 174 - 182 (2005)

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359.

Journal Article

Fieulaine, S.; Lunn, J. E.; Borel, F.; Ferrer, J. L.: The structure of a cyanobacterial sucrose-phosphatase reveals the sugar tongs that release free sucrose in the cell. Plant Cell 17 (7), pp. 2049 - 2058 (2005)

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360.

Journal Article

Kanter, U.; Usadel, B.; Guerineau, F.; Li, Y.; Pauly, M.; Tenhaken, R.: The inositol oxygenase gene family of Arabidopsis is involved in the biosynthesis of nucleotide sugar precursors for cell-wall matrix polysaccharides. Planta 221 (2), pp. 243 - 254 (2005)

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361.

Journal Article

Kopka, J.; Schauer, N.; Krueger, S.; Birkemeyer, C.; Usadel, B.; Bergmueller, E.; Doermann, P.; Weckwerth, W.; Gibon, Y.; Stitt, M. et al.; Willmitzer, L.; Fernie, A. R.; Steinhauser, D.: GMD@CSB.DB: the Golm Metabolome Database. Bioinformatics 21 (8), pp. 1635 - 1638 (2005)

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362.

Journal Article

Repsilber, D.; Fink, L.; Jacobsen, M.; Blasing, O.; Ziegler, A.: Sample selection for microarray gene expression studies. Methods of Information in Medicine 44 (3), pp. 461 - 467 (2005)

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363.

Journal Article

Studart-Guimaraes, C.; Gibon, Y.; Frankel, N.; Wood, C. C.; Zanor, M. I.; Fernie, A. R.; Carrari, F.: Identification and characterisation of the alpha and beta subunits of succinyl CoA ligase of tomato. Plant Molecular Biology 59 (5), pp. 781 - 791 (2005)

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364.

Journal Article

Usadel, B.; Kuschinsky, A. M.; Steinhauser, D.; Pauly, M.: Transcriptional co-response analysis as a tool to identify new components of the wall biosynthetic machinery. Plant Biosystems 139 (1), pp. 69 - 73 (2005)

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365.

Journal Article

Bender-Machado, L.; Bauerlein, M.; Carrari, F.; Schauer, N.; Lytovchenko, A.; Gibon, Y.; Kelly, A. A.; Loureiro, M. E.; Muller-Rober, B.; Willmitzer, L. et al.; Fernie, A. R.: Expression of a yeast acetyl CoA hydrolase in the mitochondrion of tobacco plants inhibits growth and restricts photosynthesis. Plant Molecular Biology 55 (5), pp. 645 - 662 (2004)

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366.

Journal Article

Castleden, C. K.; Aoki, N.; Gillespie, V. J.; MacRae, E. A.; Quick, W. P.; Buchner, P.; Foyer, C. H.; Furbank, R. T.; Lunn, J. E.: Evolution and function of the sucrose-phosphate synthase gene families in wheat and other grasses. Plant Physiology 135 (3), pp. 1753 - 1764 (2004)

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367.

Journal Article

Czechowski, T.; Bari, R. P.; Stitt, M.; Scheible, W.-R.; Udvardi, M. K.: Real-time RT-PCR profiling of over 1400 Arabidopsis transcription factors: unprecedented sensitivity reveals novel root- and shoot-specific genes. Plant Journal 38 (2), pp. 366 - 379 (2004)

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368.

Journal Article

Gibon, Y.; Blaesing, O. E.; Hannemann, J.; Carillo, P.; Hoehne, M.; Hendriks, J. H. M.; Palacios, N.; Cross, J.; Selbig, J.; Stitt, M.: A robot-based platform to measure multiple enzyme activities in Arabidopsis using a set of cycling assays: Comparison of changes of enzyme activities and transcript levels during diurnal cycles and in prolonged darkness. Plant Cell 16 (12), pp. 3304 - 3325 (2004)

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369.

Journal Article

Gibon, Y.; Blaesing, O. E.; Palacios-Rojas, N.; Pankovic, D.; Hendriks, J. H. M.; Fisahn, J.; Hoehne, M.; Guenther, M.; Stitt, M.: Adjustment of diurnal starch turnover to short days: depletion of sugar during the night leads to a temporary inhibition of carbohydrate utilization, accumulation of sugars and post-translational activation of ADP-glucose pyrophosphorylase in the following light period. Plant Journal 39 (6), pp. 847 - 862 (2004)

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370.

Journal Article

Scheible, W.-R.; Morcuende, R.; Czechowski, T.; Fritz, C.; Osuna, D.; Palacios-Rojas, N.; Schindelasch, D.; Thimm, O.; Udvardi, M. K.; Stitt, M.: Genome-wide reprogramming of primary and secondary metabolism, protein synthesis, cellular growth processes, and the regulatory infrastructure of Arabidopsis in response to nitrogen. Plant Physiology 136 (1), pp. 2483 - 2499 (2004)

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371.

Journal Article

Steinhauser, D.; Usadel, B.; Luedemann, A.; Thimm, O.; Kopka, J.: CSB.DB: a comprehensive systems-biology database. Bioinformatics 20 (18), pp. 3647 - 3651 (2004)

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372.

Journal Article

Thimm, O.; Blaesing, O.; Gibon, Y.; Nagel, A.; Meyer, S.; Krueger, P.; Selbig, J.; Mueller, L. A.; Rhee, S. Y.; Stitt, M.: MAPMAN: a user-driven tool to display genomics data sets onto diagrams of metabolic pathways and other biological processes. Plant Journal 37 (6), pp. 914 - 939 (2004)

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373.

Journal Article

Trevanion, S. J.; Castleden, C. K.; Foyer, C. H.; Furbank, R. T.; Quick, W. P.; Lunn, J. E.: Regulation of sucrose-phosphate synthase in wheat (Triticum aestivum) leaves. Functional Plant Biology 31 (7), pp. 685 - 695 (2004)

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374.

Journal Article

Usadel, B.; Kuschinsky, A. M.; Rosso, M. G.; Eckermann, N.; Pauly, M.: RHM2 is involved in mucilage pectin synthesis and is required for the development of the seed coat in Arabidopsis. Plant Physiology 134 (1), pp. 286 - 295 (2004)

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375.

Journal Article

Usadel, B.; Schluter, U.; Molhoj, M.; Gipmans, M.; Verma, R.; Kossmann, J.; Reiter, W. D.; Pauly, M.: Identification and characterization of a UDP-D-glucuronate 4-epimerase in Arabidopsis. FEBS Letters 569 (1-3), pp. 327 - 331 (2004)

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376.

Journal Article

Zuther, E.; Buchel, K.; Hundertmark, M.; Stitt, M.; Hincha, D. K.; Heyer, A. G.: The role of raffinose in the cold acclimation response of Arabidopsis thaliana. FEBS Letters 576 (1-2), pp. 169 - 173 (2004)

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377.

Journal Article

Carrari, F.; Nunes-Nesi, A.; Gibon, Y.; Lytovchenko, A.; Loureiro, M. E.; Fernie, A. R.: Reduced expression of aconitase results in an enhanced rate of photosynthesis and marked shifts in carbon partitioning in illuminated leaves of wild species tomato. Plant Physiology 133 (3), pp. 1322 - 1335 (2003)

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378.

Journal Article

Hendriks, J. H. M.; Kolbe, A.; Gibon, Y.; Stitt, M.; Geigenberger, P.: ADP-glucose pyrophosphorylase is activated by posttranslational redox-modification in response to light and to sugars in leaves of Arabidopsis and other plant species. Plant Physiology 133 (2), pp. 838 - 849 (2003)

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379.

Journal Article

Lunn, J. E.: Sucrose-phosphatase gene families in plants. Gene 303, pp. 187 - 196 (2003)

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380.

Journal Article

Lunn, J. E.; Gillespie, V. J.; Furbank, R. T.: Express-ion of a cyanobacterial sucrose-phosphate synthase from Synechocystis sp PCC 6803 in transgenic plants. Journal of Experimental Botany 54 (381), pp. 223 - 237 (2003)

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381.

Journal Article

Stitt, M.; Blaesing, O.; Gibon, Y.; Thimm, O.; Scheible, W.-R.: Das Problem der Fuelle. Funktionelle Genomik von Kohlenhydrat- und Stickstoff-Stoffwechsel in Arabidopsis. GenomXpress 3, pp. 2 - 5 (2003)

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382.

Journal Article

Tiessen, A.; Prescha, K.; Branscheid, A.; Palacios, N.; McKibbin, R.; Halford, N. G.; Geigenberger, P.: Evidence that SNF1-related kinase and hexokinase are involved in separate sugar-signalling pathways modulating post-translational redox activation of ADP-glucose pyrophosphorylase in potato tubers. Plant Journal 35 (4), pp. 490 - 500 (2003)

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383.

Journal Article

Fernie, A. R.; Tiessen, A.; Stitt, M.; Willmitzer, L.; Geigenberger, P.: Altered metabolic fluxes result from shifts in metabolite levels in sucrose phosphorylase-expressing potato tubers. Plant Cell and Environment 25 (10), pp. 1219 - 1232 (2002)

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384.

Journal Article

Gibon, Y.; Vigeolas, H.; Tiessen, A.; Geigenberger, P.; Stitt, M.: Sensitive and high throughput metabolite assays for inorganic pyrophosphate, ADPGlc, nucleotide phosphates, and glycolytic intermediates based on a novel enzymic cycling system. Plant Journal 30 (2), pp. 221 - 235 (2002)

MPG.PuRe

385.

Journal Article

Matt, P.; Krapp, A.; Haake, V.; Mock, H.-P.; Stitt, M.: Decreased Rubisco activity leads to dramatic changes of nitrate metabolism, amino acid metabolism and the levels of phenylpropanoids and nicotine in tobacco antisense RBCS transformants. Plant Journal 30 (6), pp. 663 - 677 (2002)

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386.

Journal Article

Stitt, M.; Hurry, V.: Plant odyssey - Adaptation of plants to cold. Biofutur (224), pp. 18 - 21 (2002)

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387.

Journal Article

Tiessen, A.; Hendriks, J. H. M.; Stitt, M.; Branscheid, A.; Gibon, Y.; Farre, E. M.; Geigenberger, P.: Starch synthesis in potato tubers is regulated by post-translational redox modification of ADP-glucose pyrophosphorylase: A novel regulatory mechanism linking starch synthesis to the sucrose supply. Plant Cell 14 (9), pp. 2191 - 2213 (2002)

MPG.PuRe

388.

Journal Article

Henkes, S.; Sonnewald, U.; Badur, R.; Flachmann, R.; Stitt, M.: A small decrease of plastid transketolase activity in antisense tobacco transformants has dramatic effects on photosynthesis and phenylpropanoid metabolism. Plant Cell 13 (3), pp. 535 - 551 (2001)

MPG.PuRe

389.

Journal Article

Loef, I.; Stitt, M.; Geigenberger, P.: Increased levels of adenine nucleotides modify the interaction between starch synthesis and respiration when adenine is supplied to discs from growing potato tubers. Planta 212 (5-6), pp. 782 - 791 (2001)

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390.

Journal Article

Matt, P.; Geiger, M.; Walch-Liu, P.; Engels, C.; Krapp, A.; Stitt, M.: The immediate cause of the diurnal changes of nitrogen metabolism in leaves of nitrate-replete tobacco: a major imbalance between the rate of nitrate reduction and the rates of nitrate uptake and ammonium metabolism during the first part of the light period. Plant Cell and Environment 24 (2), pp. 177 - 190 (2001)

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391.

Journal Article

Matt, P.; Geiger, M.; Walch-Liu, P.; Engels, C.; Krapp, A.; Stitt, M.: Elevated carbon dioxide increases nitrate uptake and nitrate reductase activity when tobacco is growing on nitrate, but increases ammonium uptake and inhibits nitrate reductase activity when tobacco is growing on ammonium nitrate. Plant Cell and Environment 24 (11), pp. 1119 - 1137 (2001)

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392.

Journal Article

Mueller, C.; Scheible, W.-R.; Stitt, M.; Krapp, A.: Influence of malate and 2-oxoglutarate on the NIA transcript level and nitrate reductase activity in tobacco leaves. Plant Cell and Environment 24 (2), pp. 191 - 203 (2001)

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393.

Journal Article

Thimm, O.; Essigmann, B.; Kloska, S.; Altmann, T.; Buckhout, T. J.: Response of arabidopsis to iron deficiency stress as revealed by microarray analysis. Plant Physiology 127 (3), pp. 1030 - 1043 (2001)

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394.

Journal Article

Geigenberger, P.; Mueller-Roeber, B.; Stitt, M.: Contribution of adenosine 5 '-diphosphoglucose pyrophosphorylase to the control of starch synthesis is decreased by water stress in growing potato tubers. Planta 209 (3), pp. 338 - 345 (1999)

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395.

Journal Article

Trethewey, R. N.; Riesmeier, J. W.; Willmitzer, L.; Stitt, M.; Geigenberger, P.: Tuber-specific expression of a yeast invertase and a bacterial glucokinase in potato leads to an activation of sucrose phosphate synthase and the creation of a sucrose futile cycle. Planta 208 (2), pp. 227 - 238 (1999)

MPG.PuRe

396.

Journal Article

Ludewig, F.; Sonnewald, U.; Kauder, F.; Heineke, D.; Geiger, M.; Stitt, M.; Mueller-Roeber, B.; Gillissen, B.; Kuehn, C.; Frommer, W. B.: The role of transient starch in acclimation to elevated atmospheric CO2. FEBS Letters 429 (2), pp. 147 - 151 (1998)

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397.

Journal Article

Trethewey, R. N.; Geigenberger, P.; Riedel, K.; Hajirezaei, M.-R.; Sonnewald, U.; Stitt, M.; Riesmeier, J. W.; Willmitzer, L.: Combined expression of glucokinase and invertase in potato tubers leads to a dramatic reduction in starch accumulation and a stimulation of glycolysis. Plant Journal 15 (1), pp. 109 - 118 (1998)

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398.

Journal Article

Scheible, W.-R.; Gonzalez-Fontes, A.; Lauerer, M.; Mueller-Roeber, B.; Caboche, M.; Stitt, M.: Nitrate acts as a signal to induce organic acid metabolism and repress starch metabolism in tobacco. Plant Cell 9 (5), pp. 783 - 798 (1997)

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Book (1)

399.

Book

Noesberger, J.; Long, S. P.; Norby, J.; Stitt, M.; Hendrey, G. R.; Blum, H.: Managed Ecosystems and CO2: Case Studies, Processes and Perspectives. Springer-Verlag, Berlin, GER (2006), 459 pp.

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Book Chapter (15)

400.

Book Chapter

Annunziata, M. G.; Lunn, J. E.: Regulation of Assimilatory Starch Metabolism by Cellular Carbohydrate Status. In: Enzymology of Complex Alpha-Glucans, 1st Ed. (Ed. Nitschke, F.). CRC Press, Boca Raton (2021)

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